Variant report

Variant	nsv469898
Chromosome Location	chr3:63411-928456
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3545)
CpG islands
(count:2628)
Chromatin interactive
region (count:95)
LncRNA
region (count:72)
Mature miRNA
region (count: 0)
miRNA target
sites (count:3)

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No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:534692-534822	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:418748-419094	HepG2	liver:	n/a	n/a
3	ARID3A	chr3:84683-85432	HepG2	liver:	n/a	n/a
4	ARID3A	chr3:455772-456068	HepG2	liver:	n/a	chr3:455850-455866
5	ARID3A	chr3:291259-291870	HepG2	liver:	n/a	n/a
6	ARID3A	chr3:86873-86900	HepG2	liver:	n/a	n/a
7	ARID3A	chr3:104725-105176	HepG2	liver:	n/a	n/a
8	ARID3A	chr3:305517-307368	HepG2	liver:	n/a	n/a
9	ATF1	chr3:128118-128267	K562	blood:	n/a	n/a
10	ATF2	chr3:319964-320748	GM12878	blood:	n/a	n/a
11	ATF2	chr3:254017-254518	GM12878	blood:	n/a	n/a
12	ATF2	chr3:254098-254530	GM12878	blood:	n/a	n/a
13	ATF2	chr3:331761-332103	GM12878	blood:	n/a	n/a
14	ATF2	chr3:319829-320847	GM12878	blood:	n/a	n/a
15	ATF3	chr3:306304-306760	A549	lung:	n/a	n/a
16	BACH1	chr3:577662-577951	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr3:271174-271333	K562	blood:	n/a	n/a
18	BACH1	chr3:238826-240389	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr3:888492-888519	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr3:165624-165661	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr3:541423-541496	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr3:516562-516874	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr3:238302-238499	H1-hESC	embryonic stem cell:	n/a	n/a
24	BATF	chr3:166561-166841	GM12878	blood:	n/a	chr3:166679-166690 chr3:166653-166662
25	BATF	chr3:462357-462600	GM12878	blood:	n/a	chr3:462485-462494
26	BATF	chr3:892892-893121	GM12878	blood:	n/a	chr3:892988-892999
27	BATF	chr3:341729-341996	GM12878	blood:	n/a	n/a
28	BATF	chr3:515014-515376	GM12878	blood:	n/a	chr3:515252-515263
29	BATF	chr3:254085-254416	GM12878	blood:	n/a	n/a
30	BATF	chr3:638972-639242	GM12878	blood:	n/a	chr3:639093-639102
31	BATF	chr3:462277-462661	GM12878	blood:	n/a	chr3:462485-462494
32	BATF	chr3:320384-320805	GM12878	blood:	n/a	n/a
33	BATF	chr3:319974-320310	GM12878	blood:	n/a	n/a
34	BATF	chr3:259675-259847	GM12878	blood:	n/a	n/a
35	BATF	chr3:599827-600084	GM12878	blood:	n/a	chr3:599953-599962
36	BATF	chr3:505464-505768	GM12878	blood:	n/a	n/a
37	BATF	chr3:599789-600089	GM12878	blood:	n/a	chr3:599953-599962
38	BATF	chr3:892848-893082	GM12878	blood:	n/a	chr3:892988-892999
39	BATF	chr3:166548-166773	GM12878	blood:	n/a	chr3:166679-166690 chr3:166653-166662
40	BATF	chr3:319906-320293	GM12878	blood:	n/a	n/a
41	BATF	chr3:515030-515408	GM12878	blood:	n/a	chr3:515252-515263
42	BCL11A	chr3:319927-320341	GM12878	blood:	n/a	chr3:320201-320210 chr3:320061-320069
43	BCL11A	chr3:319942-320280	GM12878	blood:	n/a	chr3:320201-320210 chr3:320061-320069
44	BCL3	chr3:320464-320727	GM12878	blood:	n/a	n/a
45	BCL3	chr3:306315-306750	A549	lung:	n/a	n/a
46	BCL3	chr3:306168-306863	A549	lung:	n/a	chr3:306285-306294 chr3:306282-306291
47	BCLAF1	chr3:320388-320763	GM12878	blood:	n/a	n/a
48	BCLAF1	chr3:599656-600200	GM12878	blood:	n/a	chr3:599779-599788 chr3:599826-599835
49	BHLHE40	chr3:342270-342502	GM12878	blood:	n/a	n/a
50	BHLHE40	chr3:401416-401710	GM12878	blood:	n/a	n/a

(count:2628 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:353166-353216	HUVEC	blood vessel:	n/a
2	chr3:239733-239783	BE2_C	brain:	n/a
3	chr3:239229-239279	A549	lung:	n/a
4	chr3:239733-239783	MCF-7	breast:	n/a
5	chr3:577821-577871	PrEC	prostate:	n/a
6	chr3:353166-353216	HUVEC	blood vessel:	n/a
7	chr3:239733-239783	BE2_C	brain:	n/a
8	chr3:239229-239279	A549	lung:	n/a
9	chr3:239733-239783	MCF-7	breast:	n/a
10	chr3:577821-577871	PrEC	prostate:	n/a
11	chr3:238161-238211	HRE	kidney:	n/a
12	chr3:347869-347919	GM19239	blood:	n/a
13	chr3:238618-238668	AG04449	skin:	fetal
14	chr3:238318-238368	CMK	blood:	n/a
15	chr3:353166-353216	HIPEpiC	eye:	n/a
16	chr3:523012-523062	HRE	kidney:	n/a
17	chr3:577821-577871	HCPEpiC	choroid plexus:	n/a
18	chr3:350682-350732	HCM	heart:	n/a
19	chr3:350892-350942	HRPEpiC	eye:	n/a
20	chr3:427757-427807	NB4	blood:	n/a
21	chr3:353166-353216	CMK	blood:	n/a
22	chr3:238392-238442	HEEpiC	esophagus:	n/a
23	chr3:114243-114293	HIPEpiC	eye:	n/a
24	chr3:491979-492029	AG09319	gingival:	n/a
25	chr3:239229-239279	H1-hESC	embryonic stem cell:	embryo
26	chr3:239229-239279	RPTEC	kidney:	n/a
27	chr3:491979-492029	HPAEpiC	pulmonary alveolar:	n/a
28	chr3:238318-238368	BE2_C	brain:	n/a
29	chr3:240139-240189	Caco-2	colon:	n/a
30	chr3:238392-238442	ECC-1	luminal epithelium:	n/a
31	chr3:239229-239279	AoSMC	blood vessel:	n/a
32	chr3:239665-239715	Jurkat	blood:	n/a
33	chr3:347869-347919	HCT-116	colon:	n/a
34	chr3:241182-241232	RPTEC	kidney:	n/a
35	chr3:239506-239556	PANC-1	pancreas:	n/a
36	chr3:351003-351053	HRCEpiC	kidney:	n/a
37	chr3:390449-390499	SAEC	small airway:	n/a
38	chr3:239229-239279	LNCaP	prostate:	n/a
39	chr3:501673-501723	H1-hESC	embryonic stem cell:	embryo
40	chr3:782757-782807	HRCEpiC	kidney:	n/a
41	chr3:238048-238098	NHBE	bronchial:	n/a
42	chr3:238496-238546	SAEC	small airway:	n/a
43	chr3:350602-350652	SK-N-SH_RA	brain:	n/a
44	chr3:491979-492029	PFSK-1	brain:	n/a
45	chr3:243996-244046	PANC-1	pancreas:	n/a
46	chr3:238392-238442	A549	lung:	n/a
47	chr3:238931-238981	SKMC	muscle:	n/a
48	chr3:390449-390499	BJ	skin:	n/a
49	chr3:238496-238546	Hepatocyte	liver:	n/a
50	chr3:114243-114293	H1-hESC	embryonic stem cell:	embryo

(count:95 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr3:84119..86199-chr3:87586..89599,2	K562	blood:
2	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
3	chr21:9533639..9536328-chr3:614645..617390,2	MCF-7	breast:
4	chr3:163984..165661-chr3:172610..174560,2	K562	blood:
5	chr11:73160067..73160822-chr3:118894..119482,2	MCF-7	breast:
6	chr3:84540..85233-chr3:395143..396665,5	MCF-7	breast:
7	chr3:844122..846364-chr3:847958..849773,2	K562	blood:
8	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
9	chr3:369627..372241-chr3:375088..376630,2	K562	blood:
10	chr3:188824..190368-chr3:386265..388997,2	MCF-7	breast:
11	chr3:426526..428688-chr3:432686..435480,2	K562	blood:
12	chr3:380749..382647-chr3:383286..385545,2	MCF-7	breast:
13	chr3:395767..396427-chr3:418920..419430,2	MCF-7	breast:
14	chr3:297411..299702-chr3:300779..302869,2	K562	blood:
15	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
16	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
17	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
18	chr3:389768..391549-chr3:394844..396538,2	MCF-7	breast:
19	chr3:379607..381981-chr3:384960..386643,2	K562	blood:
20	chr3:131415..134151-chr3:136022..137906,2	MCF-7	breast:
21	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
22	chr3:751166..753010-chr3:765105..767568,2	K562	blood:
23	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
24	chr3:726576..727076-chr3:11025934..11026463,2	MCF-7	breast:
25	chr3:751166..753010-chr3:765105..767568,2	K562	blood:
26	chr3:84468..85168-chr3:395782..396503,2	MCF-7	breast:
27	chr3:84682..85249-chr3:418773..419384,2	MCF-7	breast:
28	chr3:86365..87356-chr3:395941..396726,2	MCF-7	breast:
29	chr3:84468..85168-chr3:395782..396503,2	MCF-7	breast:
30	chr3:395767..396427-chr3:418920..419430,2	MCF-7	breast:
31	chr2:137975660..137976445-chr3:388390..389053,2	MCF-7	breast:
32	chr3:674217..674800-chr3:1123463..1123990,2	MCF-7	breast:
33	chr3:379607..381981-chr3:384960..386643,2	K562	blood:
34	chr3:217250..219144-chr3:222760..225297,2	MCF-7	breast:
35	chr3:457571..459756-chr3:462210..465015,2	K562	blood:
36	chr3:805612..808013-chr3:811141..813375,2	K562	blood:
37	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
38	chr3:674203..674975-chr3:2197712..2198482,2	MCF-7	breast:
39	chr3:383287..386050-chr3:389112..391059,2	MCF-7	breast:
40	chr3:321596..323780-chr3:337949..340526,2	MCF-7	breast:
41	chr14:56081549..56082133-chr3:97763..98653,2	MCF-7	breast:
42	chr3:423895..425881-chr3:427804..430449,2	K562	blood:
43	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
44	chr3:84119..86199-chr3:87586..89599,2	K562	blood:
45	chr3:321596..323780-chr3:337949..340526,2	MCF-7	breast:
46	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
47	chr3:291331..293955-chr3:294697..297452,2	MCF-7	breast:
48	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
49	chr3:703062..705164-chr3:828470..830008,2	K562	blood:
50	chr3:169328..170327-chr3:184848..185564,2	MCF-7	breast:

(count:72 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IL5RA-5	chr3:424250-424415	ENSG00000234661.1
2	lnc-IL5RA-6	chr3:238139-238191	ENSG00000224318.1
3	lnc-CHL1-1	chr3:95888-96275	XLOC_002563
4	lnc-IL5RA-5	chr3:405053-405706	ENSG00000234661.1
5	lnc-CNTN6-7	chr3:288251-288539	NONHSAT087560
6	lnc-CHL1-3	chr3:633788-633866	NR_110118
7	lnc-CHL1-1	chr3:109008-109196	XLOC_002563
8	lnc-CHL1-1	chr3:109401-109695	XLOC_002563
9	lnc-IL5RA-6	chr3:237679-237723	ENSG00000224318.1
10	lnc-CNTN6-7	chr3:288251-290282	NONHSAT087561
11	lnc-CHL1-2	chr3:65642-66175	XLOC_002562
12	lnc-CHL1-3	chr3:868690-868816	ENSG00000224957
13	lnc-CHL1-3	chr3:791898-791933	ENSG00000224957
14	lnc-CNTN6-2	chr3:898807-898956	XLOC_002565
15	lnc-CHL1-2	chr3:65431-65486	XLOC_002562
16	lnc-CHL1-1	chr3:95888-96275	XLOC_002563
17	lnc-CHL1-4	chr3:84310-84695	l_2300_chr3:84309-87048_testes
18	lnc-IL5RA-17	chr3:147014-147245	l_2301_chr3:147013-148034_heart
19	lnc-CNTN6-7	chr3:254887-255362	NONHSAT087562
20	lnc-IL5RA-15	chr3:350397-351005	NONHSAT087564
21	lnc-IL5RA-6	chr3:238650-238882	ENSG00000224318.1
22	lnc-CHL1-3	chr3:884059-884327	ENSG00000224957
23	lnc-CHL1-3	chr3:882398-882493	NR_110118
24	lnc-IL5RA-7	chr3:95031-95375	XLOC_003014
25	lnc-CHL1-6	chr3:608788-608866	ucscGeneNc_uc003boy_1
26	lnc-CHL1-3	chr3:884059-887698	NR_110118
27	lnc-IL5RA-6	chr3:238139-238191	ENSG00000224318.1
28	lnc-IL5RA-17	chr3:147879-148034	l_2301_chr3:147013-148034_heart
29	lnc-IL5RA-6	chr3:237441-237597	ENSG00000224318.1
30	lnc-IL5RA-6	chr3:237679-237723	ENSG00000224318.1
31	lnc-IL5RA-16	chr3:157540-157624	NONHSAT087555
32	lnc-IL5RA-16	chr3:172879-173007	NONHSAT087554
33	lnc-CNTN6-7	chr3:239326-239775	NONHSAT087561
34	lnc-IL5RA-6	chr3:238290-238542	ENSG00000224318.1
35	lnc-CNTN6-2	chr3:899428-900630	NONHSAT087575
36	lnc-IL5RA-7	chr3:95976-96029	XLOC_003014
37	lnc-IL5RA-16	chr3:157540-157620	NONHSAT087554
38	lnc-CHL1-3	chr3:633788-633866	ENSG00000224957
39	lnc-IL5RA-6	chr3:237441-237597	ENSG00000224318.1
40	lnc-CNTN6-7	chr3:286296-286375	NONHSAT087561
41	lnc-CHL1-6	chr3:552914-553010	ucscGeneNc_uc003boy_1
42	lnc-CHL1-3	chr3:577936-578010	ENSG00000224957
43	lnc-IL5RA-6	chr3:238139-238191	ENSG00000224318.1
44	lnc-IL5RA-5	chr3:415500-415735	ENSG00000234661.2
45	lnc-IL5RA-6	chr3:238139-238386	NONHSAT087559
46	lnc-CHL1-1	chr3:111531-111663	XLOC_002563
47	lnc-IL5RA-6	chr3:238650-239024	ENSG00000224318.1
48	lnc-CHL1-6	chr3:859059-862698	ucscGeneNc_uc003boy_1
49	lnc-CNTN6-2	chr3:898848-898956	NONHSAT087575
50	lnc-CNTN6-7	chr3:286296-286375	NONHSAT087560

No data

(count:3 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	CHL1	hsa-miR-10a-5p	chr3:450185-450191
2	CHL1	hsa-miR-10a-5p	chr3:450171-450192
3	CHL1	hsa-miR-181a-5p	chr3:448562-448584

Variant related genes	Relation type
ENSG00000224957	TF binding region
ENSG00000224239	TF binding region
RNU6-1194P	TF binding region
RPS8P6	TF binding region
ENSG00000223587	TF binding region
CHL1-AS1	TF binding region
ENSG00000224918	TF binding region
ENSG00000238075	TF binding region
CHL1	TF binding region
CHL1-AS2	TF binding region
ENSG00000224957	CpG island
ENSG00000224239	CpG island
RNU6-1194P	CpG island
RPS8P6	CpG island
ENSG00000223587	CpG island
CHL1-AS1	CpG island
ENSG00000224918	CpG island
ENSG00000238075	CpG island
CHL1	CpG island
CHL1-AS2	CpG island
ENSG00000234661	chromatin interactions
ENSG00000252017	chromatin interactions
DCBLD2	miRNA target sites
COPS7A	miRNA target sites
HIF1A	miRNA target sites
IL10	miRNA target sites
CPEB4	miRNA target sites

Extended variants
information (count: 24983 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:24983 , 50 per page) page: 1 2 3 4 5 6 7 ... 500

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs13072188	chr3:63411-63412	Inactive region	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs188865466	chr3:64209-64210	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs536454983	chr3:64217-64218	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs9311316	chr3:64221-64222	Inactive region	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs116765074	chr3:64225-64226	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs542295881	chr3:64228-64229	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs554171608	chr3:64257-64258	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs181814215	chr3:64266-64267	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs543352331	chr3:64289-64290	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs565147999	chr3:64295-64296	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs185559971	chr3:64299-64300	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs541192854	chr3:64328-64329	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs560399266	chr3:64332-64333	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs199931412	chr3:65442-65443	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs139173350	chr3:65456-65457	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs548341852	chr3:65465-65466	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
17	rs140438922	chr3:65486-65487	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs112075997	chr3:65646-65647	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs554878124	chr3:65666-65667	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs9757357	chr3:65672-65673	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs558741629	chr3:65694-65695	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
22	rs73093420	chr3:65707-65708	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs541038051	chr3:65710-65711	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
24	rs559636578	chr3:65721-65722	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
25	rs570293809	chr3:65798-65799	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
26	rs369419423	chr3:65811-65812	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
27	rs537715654	chr3:65831-65832	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
28	rs542096352	chr3:65836-65837	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
29	rs563589032	chr3:65870-65871	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
30	rs183467924	chr3:65885-65886	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
31	rs552260167	chr3:65902-65903	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
32	rs369773414	chr3:65961-65962	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
33	rs73009220	chr3:65982-65983	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs188859609	chr3:65986-65987	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
35	rs191948686	chr3:66002-66003	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
36	rs541078741	chr3:66014-66015	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
37	rs149311860	chr3:66049-66050	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
38	rs535792839	chr3:66074-66075	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
39	rs557283565	chr3:66078-66079	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
40	rs9713920	chr3:66083-66084	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs539211631	chr3:66107-66108	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
42	rs574859468	chr3:66143-66144	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
43	rs112617705	chr3:66160-66161	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
44	rs35007339	chr3:66164-66165	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs545839864	chr3:74419-74420	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs564053938	chr3:74436-74437	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs528434641	chr3:74460-74461	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs527773328	chr3:74463-74464	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs568172730	chr3:74503-74504	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs112795193	chr3:74506-74507	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Cancer	20164920	CNVD
Lung cancer	16618734	CNVD
Autism	18349135	CNVD
Breast cancer	20409316	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Intellectual disability	22045946	CNVD
Squamous cell cancer	19607727	CNVD
Gastric adenocarcinoma	19115996	CNVD
sporadic birth defects	19047251	CNVD
Mental retardation	17124404	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Sudden cardiac death	19188705	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Autism	22543975	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
Ependymoma	20639864	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Tetralogy of Fallot	22912587	CNVD
early-passage human iPS cells	21368824	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Autism	22495311	CNVD
Autism	20685689	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:2059 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:74400-74800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
2	chr3:75200-75800	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr3:84000-84400	Enhancers	Fetal Brain Male	brain
4	chr3:84200-84600	Enhancers	Fetal Brain Female	brain
5	chr3:84400-85400	Weak transcription	Fetal Brain Male	brain
6	chr3:84800-85200	Enhancers	Brain Germinal Matrix	brain
7	chr3:84800-85200	Active TSS	Fetal Brain Female	brain
8	chr3:84800-85400	Enhancers	Liver	Liver
9	chr3:85200-85800	Enhancers	Fetal Brain Female	brain
10	chr3:85200-85800	Enhancers	HepG2	liver
11	chr3:85400-86000	Flanking Active TSS	Liver	Liver
12	chr3:85400-86200	Enhancers	Fetal Brain Male	brain
13	chr3:85600-85800	Flanking Active TSS	Gastric	stomach
14	chr3:85600-86000	Bivalent Enhancer	Fetal Kidney	kidney
15	chr3:85800-86000	ZNF genes & repeats	Gastric	stomach
16	chr3:85800-86200	Flanking Active TSS	HepG2	liver
17	chr3:86000-86800	Enhancers	Liver	Liver
18	chr3:86200-86800	Enhancers	HepG2	liver
19	chr3:86800-87800	Weak transcription	HepG2	liver
20	chr3:88000-88200	Enhancers	HepG2	liver
21	chr3:88000-89000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr3:88000-90400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr3:88200-89800	Enhancers	Adipose Nuclei	Adipose
24	chr3:95000-95600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr3:95000-96600	Enhancers	Breast Myoepithelial Primary Cells	Breast
26	chr3:95600-104600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr3:97400-97600	Enhancers	Brain Hippocampus Middle	brain
28	chr3:97600-98000	Enhancers	Fetal Brain Male	brain
29	chr3:97800-98200	Active TSS	Fetal Brain Female	brain
30	chr3:98000-98600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr3:98000-104800	Weak transcription	Fetal Brain Male	brain
32	chr3:98200-98600	Enhancers	Fetal Brain Female	brain
33	chr3:103600-104400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr3:103800-104200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr3:104200-104400	Enhancers	Gastric	stomach
36	chr3:104400-104800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr3:104400-105000	Weak transcription	Gastric	stomach
38	chr3:104400-105400	Enhancers	HUES48 Cell Line	embryonic stem cell
39	chr3:104400-105400	Enhancers	HepG2	liver
40	chr3:104400-105600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr3:104600-104800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr3:104600-104800	Enhancers	Adipose Nuclei	Adipose
43	chr3:104600-104800	Enhancers	Brain Substantia Nigra	brain
44	chr3:104600-105600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr3:104600-105600	Enhancers	Fetal Lung	lung
46	chr3:104800-105000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr3:104800-105000	Active TSS	Brain Germinal Matrix	brain
48	chr3:104800-105000	Enhancers	Stomach Mucosa	stomach
49	chr3:104800-105200	Enhancers	Fetal Brain Male	brain
50	chr3:104800-105400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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