Variant report

Variant	nsv470139
Chromosome Location	chr19:37171201-37264190
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1275)
CpG islands
(count:976)
Chromatin interactive
region (count:47)
LncRNA
region (count:26)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:1275 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:37262657-37262874	K562	blood:	n/a	n/a
2	ARID3A	chr19:37178254-37178421	K562	blood:	n/a	n/a
3	ARID3A	chr19:37177857-37178885	HepG2	liver:	n/a	n/a
4	ATF1	chr19:37262612-37263076	K562	blood:	n/a	n/a
5	ATF1	chr19:37263636-37264165	K562	blood:	n/a	n/a
6	ATF2	chr19:37262450-37262871	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr19:37262497-37262875	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF3	chr19:37210371-37211193	A549	lung:	n/a	n/a
9	ATF3	chr19:37178280-37178522	K562	blood:	n/a	n/a
10	ATF3	chr19:37178167-37179119	A549	lung:	n/a	n/a
11	BACH1	chr19:37177969-37178912	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr19:37263240-37263874	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr19:37238791-37239110	H1-hESC	embryonic stem cell:	n/a	n/a
14	BCL3	chr19:37177178-37178903	A549	lung:	n/a	n/a
15	BCL3	chr19:37178207-37178634	GM12878	blood:	n/a	n/a
16	BCL3	chr19:37177611-37178935	A549	lung:	n/a	n/a
17	BCLAF1	chr19:37263431-37264244	GM12878	blood:	n/a	chr19:37263827-37263836 chr19:37263534-37263543 chr19:37263685-37263694
18	BCLAF1	chr19:37178007-37178651	GM12878	blood:	n/a	n/a
19	BCLAF1	chr19:37263586-37264216	GM12878	blood:	n/a	chr19:37263827-37263836 chr19:37263685-37263694
20	BHLHE40	chr19:37263544-37264295	GM12878	blood:	n/a	n/a
21	BHLHE40	chr19:37178057-37178751	GM12878	blood:	n/a	n/a
22	BHLHE40	chr19:37263465-37264220	K562	blood:	n/a	n/a
23	BHLHE40	chr19:37262602-37262976	K562	blood:	n/a	n/a
24	BHLHE40	chr19:37178126-37178687	K562	blood:	n/a	n/a
25	BHLHE40	chr19:37262281-37262587	GM12878	blood:	n/a	n/a
26	BRCA1	chr19:37263575-37264411	GM12878	blood:	n/a	chr19:37263749-37263758
27	BRCA1	chr19:37263506-37264050	HepG2	liver:	n/a	chr19:37263749-37263758
28	BRCA1	chr19:37178183-37178666	Hela-S3	cervix:	n/a	n/a
29	BRCA1	chr19:37178184-37178469	H1-hESC	embryonic stem cell:	n/a	n/a
30	BRCA1	chr19:37263550-37264226	H1-hESC	embryonic stem cell:	n/a	chr19:37263749-37263758
31	BRCA1	chr19:37178044-37178390	HepG2	liver:	n/a	n/a
32	CBX3	chr19:37211337-37211554	K562	blood:	n/a	n/a
33	CBX3	chr19:37238603-37239027	K562	blood:	n/a	n/a
34	CBX3	chr19:37239296-37239745	K562	blood:	n/a	n/a
35	CBX3	chr19:37238627-37239052	K562	blood:	n/a	n/a
36	CBX3	chr19:37240410-37240790	K562	blood:	n/a	n/a
37	CBX3	chr19:37239413-37239991	K562	blood:	n/a	n/a
38	CBX3	chr19:37262090-37262932	K562	blood:	n/a	n/a
39	CBX3	chr19:37210449-37211001	K562	blood:	n/a	n/a
40	CBX3	chr19:37263675-37264298	K562	blood:	n/a	n/a
41	CBX3	chr19:37263006-37264267	K562	blood:	n/a	n/a
42	CBX3	chr19:37211288-37211548	K562	blood:	n/a	n/a
43	CBX3	chr19:37210750-37211065	K562	blood:	n/a	n/a
44	CCNT2	chr19:37263529-37263867	K562	blood:	n/a	n/a
45	CCNT2	chr19:37178114-37178749	K562	blood:	n/a	n/a
46	CEBPB	chr19:37178378-37178675	HepG2	liver:	n/a	n/a
47	CEBPB	chr19:37262507-37262837	K562	blood:	n/a	n/a
48	CEBPB	chr19:37248066-37248361	HepG2	liver:	n/a	chr19:37248209-37248220
49	CEBPB	chr19:37182649-37183019	Hela-S3	cervix:	n/a	chr19:37182848-37182859
50	CEBPB	chr19:37248051-37248310	A549	lung:	n/a	chr19:37248209-37248220

(count:976 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:37262806-37262856	NHDF-neo	bronchial:	n/a
2	chr19:37178105-37178155	HUVEC	blood vessel:	n/a
3	chr19:37262611-37262661	PrEC	prostate:	n/a
4	chr19:37175471-37175521	ovcar-3	ovarian:	n/a
5	chr19:37178174-37178224	AG09319	gingival:	n/a
6	chr19:37175471-37175521	HepG2	liver:	n/a
7	chr19:37175471-37175521	HNPCEpiC	eye:	n/a
8	chr19:37262806-37262856	ProgFib	skin:	n/a
9	chr19:37263997-37264047	AoSMC	blood vessel:	n/a
10	chr19:37263704-37263754	T-47D	breast:	n/a
11	chr19:37178943-37178993	HCPEpiC	choroid plexus:	n/a
12	chr19:37175471-37175521	SK-N-SH	brain:	n/a
13	chr19:37178943-37178993	PFSK-1	brain:	n/a
14	chr19:37261338-37261388	K562	blood:	n/a
15	chr19:37263925-37263975	MCF-7	breast:	n/a
16	chr19:37262806-37262856	AG09309	skin:	n/a
17	chr19:37177866-37177916	HUVEC	blood vessel:	n/a
18	chr19:37178174-37178224	Caco-2	colon:	n/a
19	chr19:37178884-37178934	PANC-1	pancreas:	n/a
20	chr19:37178943-37178993	HMEC	breast:	n/a
21	chr19:37177866-37177916	GM12878	blood:	n/a
22	chr19:37178411-37178461	BJ	skin:	n/a
23	chr19:37178411-37178461	PFSK-1	brain:	n/a
24	chr19:37178884-37178934	AG09319	gingival:	n/a
25	chr19:37263925-37263975	K562	blood:	n/a
26	chr19:37178884-37178934	PFSK-1	brain:	n/a
27	chr19:37178174-37178224	Hepatocyte	liver:	n/a
28	chr19:37177866-37177916	HEEpiC	esophagus:	n/a
29	chr19:37263925-37263975	Jurkat	blood:	n/a
30	chr19:37263704-37263754	HRCEpiC	kidney:	n/a
31	chr19:37261338-37261388	HPAEpiC	pulmonary alveolar:	n/a
32	chr19:37262611-37262661	HNPCEpiC	eye:	n/a
33	chr19:37178489-37178539	AG04450	lung:	fetal
34	chr19:37261338-37261388	SK-N-SH_RA	brain:	n/a
35	chr19:37263860-37263910	RPTEC	kidney:	n/a
36	chr19:37175471-37175521	MCF10A-Er-Src	breast:	n/a
37	chr19:37263860-37263910	K562	blood:	n/a
38	chr19:37183199-37183249	HepG2	liver:	n/a
39	chr19:37263997-37264047	HCF	heart:	n/a
40	chr19:37178884-37178934	A549	lung:	n/a
41	chr19:37261338-37261388	AoSMC	blood vessel:	n/a
42	chr19:37263704-37263754	NB4	blood:	n/a
43	chr19:37178943-37178993	HL-60	blood:	n/a
44	chr19:37178174-37178224	SK-N-MC	brain:	n/a
45	chr19:37178489-37178539	GM12878	blood:	n/a
46	chr19:37178105-37178155	HCM	heart:	n/a
47	chr19:37178489-37178539	MCF10A-Er-Src	breast:	n/a
48	chr19:37262611-37262661	NHBE	bronchial:	n/a
49	chr19:37178943-37178993	AG10803	skin:	n/a
50	chr19:37177866-37177916	MCF-7	breast:	n/a

(count:47 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:37251050..37253056-chr19:37257970..37259681,2	K562	blood:
2	chr19:37177766..37179816-chr19:37265277..37267800,2	MCF-7	breast:
3	chr19:37171917..37174270-chr19:37177933..37180774,2	K562	blood:
4	chr19:36979208..36981780-chr19:37261367..37264210,2	K562	blood:
5	chr19:37170168..37172761-chr19:37172837..37175354,2	MCF-7	breast:
6	chr19:37237446..37239729-chr19:37240708..37243569,2	K562	blood:
7	chr19:37178528..37181620-chr19:37184427..37188205,4	MCF-7	breast:
8	chr19:37038036..37040830-chr19:37176881..37179372,3	MCF-7	breast:
9	chr17:45973368..45973979-chr19:37178763..37179345,2	Hela-S3	cervix:
10	chr19:37178059..37180206-chr19:37184141..37185647,2	MCF-7	breast:
11	chr19:37257289..37258823-chr19:37260501..37262217,2	K562	blood:
12	chr19:16738748..16739541-chr19:37178086..37179072,2	Hela-S3	cervix:
13	chr19:37177678..37180392-chr19:37181759..37186073,4	K562	blood:
14	chr19:37255401..37258823-chr19:37260501..37263315,3	K562	blood:
15	chr19:37176901..37179130-chr19:37188075..37189594,2	K562	blood:
16	chr19:37063854..37065418-chr19:37262714..37265586,2	K562	blood:
17	chr19:36705027..36707515-chr19:37176765..37178367,2	MCF-7	breast:
18	chr19:37230647..37232496-chr19:37235313..37237662,2	K562	blood:
19	chr19:37017743..37019603-chr19:37263003..37264867,2	MCF-7	breast:
20	chr19:36924487..36927399-chr19:37259800..37262103,2	K562	blood:
21	chr19:37200029..37202996-chr19:37208997..37211865,2	K562	blood:
22	chr19:37171965..37174267-chr19:37175474..37177630,2	K562	blood:
23	chr19:37177479..37179170-chr19:37187073..37188900,2	MCF-7	breast:
24	chr19:37230647..37232496-chr19:37235313..37237662,2	K562	blood:
25	chr19:37181989..37183751-chr19:37185585..37187447,2	K562	blood:
26	chr19:37180811..37182486-chr19:37182831..37185774,2	MCF-7	breast:
27	chr19:37257289..37258823-chr19:37260501..37262217,2	K562	blood:
28	chr19:36977782..36980646-chr19:37176349..37177933,2	K562	blood:
29	chr19:37253172..37254822-chr19:37261292..37262895,2	K562	blood:
30	chr19:37157483..37161085-chr19:37175435..37180024,4	MCF-7	breast:
31	chr19:37180811..37182486-chr19:37182831..37185774,2	MCF-7	breast:
32	chr19:37264129..37265649-chr19:37327826..37329593,2	K562	blood:
33	chr19:37237446..37239729-chr19:37240708..37243569,2	K562	blood:
34	chr19:37176901..37179127-chr19:37187369..37189594,2	K562	blood:
35	chr19:37253172..37254822-chr19:37261292..37262895,2	K562	blood:
36	chr19:37248355..37251214-chr19:37254727..37257634,2	K562	blood:
37	chr19:37255401..37258823-chr19:37260501..37263315,3	K562	blood:
38	chr19:37181989..37183751-chr19:37185585..37187447,2	K562	blood:
39	chr19:37171965..37174267-chr19:37175474..37177630,2	K562	blood:
40	chr19:37251050..37253056-chr19:37257970..37259681,2	K562	blood:
41	chr19:37248355..37251214-chr19:37254727..37257634,2	K562	blood:
42	chr19:37169916..37172252-chr19:37176189..37178987,2	MCF-7	breast:
43	chr19:36869355..36872280-chr19:37261242..37264152,2	MCF-7	breast:
44	chr19:37170168..37172761-chr19:37172837..37175354,2	MCF-7	breast:
45	chr19:37201484..37203219-chr19:37205310..37207219,2	K562	blood:
46	chr19:37184109..37186391-chr19:37262540..37264096,2	MCF-7	breast:
47	chr19:37062686..37064573-chr19:37176993..37178796,2	MCF-7	breast:

(count:26 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF461-1	chr19:37173807-37176917	NONHSAT066036
2	lnc-ZNF461-1	chr19:37177588-37177708	NONHSAT066036
3	lnc-ZNF461-1	chr19:37178170-37178312	ENSG00000225975.2
4	lnc-ZNF461-1	chr19:37177329-37177708	ENSG00000225975.2
5	lnc-ZNF461-1	chr19:37175695-37176413	NONHSAT066037
6	lnc-ZNF461-1	chr19:37176342-37176413	ENSG00000225975.1
7	lnc-ZNF461-1	chr19:37178170-37178326	NONHSAT066037
8	lnc-ZNF567-4	chr19:37223112-37223145	ucscGeneNc_uc002ntb_1
9	lnc-ZNF461-4	chr19:37193170-37193302	l_1676_chr19:37148392-37193298_testes
10	lnc-ZNF461-1	chr19:37178170-37178312	ENSG00000225975.1
11	lnc-ZNF567-4	chr19:37222239-37222365	ucscGeneNc_uc002ntb_1
12	lnc-ZNF461-1	chr19:37176739-37176872	NONHSAT066037
13	lnc-ZNF461-1	chr19:37178170-37178351	ENSG00000225975.1
14	lnc-ZNF567-4	chr19:37208608-37208753	ucscGeneNc_uc002ntb_1
15	lnc-ZNF461-1	chr19:37176216-37176917	ENSG00000225975.1
16	lnc-ZNF461-1	chr19:37177588-37177708	ENSG00000225975.2
17	lnc-ZNF461-1	chr19:37177588-37177708	ENSG00000225975.1
18	lnc-ZNF461-4	chr19:37185205-37185518	l_1676_chr19:37148392-37193298_testes
19	lnc-ZNF461-1	chr19:37176367-37176917	ENSG00000225975.2
20	lnc-ZNF461-4	chr19:37208461-37208525	l_1676_chr19:37148392-37193298_testes
21	lnc-ZNF461-1	chr19:37178170-37178518	NONHSAT066036
22	lnc-ZNF461-1	chr19:37177588-37177708	ENSG00000225975.1
23	lnc-ZNF461-1	chr19:37178170-37178339	ENSG00000225975.2
24	lnc-ZNF461-1	chr19:37177588-37177708	NONHSAT066037
25	lnc-ZNF461-1	chr19:37176739-37176917	ENSG00000225975.1
26	lnc-ZNF567-4	chr19:37220300-37220609	ucscGeneNc_uc002ntb_1

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	ZNF567	hsa-miR-130b-3p	chr19:37211905-37211925
2	ZNF567	hsa-miR-30b-5p	chr19:37211699-37211720

Variant related genes	Relation type
ENSG00000225975	TF binding region
ENSG00000267260	TF binding region
ZNF567	TF binding region
ZNF850	TF binding region
ENSG00000225975	CpG island
ENSG00000267260	CpG island
ZNF567	CpG island
ZNF850	CpG island
ENSG00000197863	chromatin interactions
ENSG00000197808	chromatin interactions
ENSG00000186020	chromatin interactions
ENSG00000167635	chromatin interactions
ENSG00000225975	chromatin interactions
ENSG00000167182	chromatin interactions
ENSG00000196357	chromatin interactions
ENSG00000141979	chromatin interactions
ENSG00000267309	chromatin interactions
ENSG00000267363	chromatin interactions
ENSG00000267041	chromatin interactions
ENSG00000228629	chromatin interactions
ENSG00000267353	chromatin interactions
ENSG00000186017	chromatin interactions
ENSG00000189042	chromatin interactions
ENSG00000254004	chromatin interactions
ENSG00000233527	chromatin interactions
ENSG00000142065	chromatin interactions
ENSG00000267260	chromatin interactions
ENSG00000105085	chromatin interactions

Extended variants
information (count: 3020 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:3020 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs569626083	chr19:37171201-37171202	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs3108207	chr19:37171202-37171203	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
3	rs551852640	chr19:37171211-37171212	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs570434041	chr19:37171279-37171280	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs141460070	chr19:37171305-37171306	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs534866804	chr19:37171315-37171316	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs575870017	chr19:37171325-37171326	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs553299953	chr19:37171346-37171347	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs568405105	chr19:37171375-37171376	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs73612050	chr19:37171380-37171381	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs557149690	chr19:37171410-37171411	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs368808513	chr19:37171417-37171418	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs34304873	chr19:37171547-37171548	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs539939814	chr19:37171558-37171559	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs538534374	chr19:37171578-37171579	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs557828088	chr19:37171600-37171601	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs572907930	chr19:37171601-37171602	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs189731815	chr19:37171620-37171621	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs78947195	chr19:37171625-37171626	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs140317687	chr19:37171713-37171714	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs544449315	chr19:37171759-37171760	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs557256106	chr19:37171761-37171762	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs12976519	chr19:37171774-37171775	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs563110358	chr19:37171824-37171825	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs530480348	chr19:37171830-37171831	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs576871344	chr19:37171917-37171918	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs552251777	chr19:37171967-37171968	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs145465962	chr19:37172005-37172006	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs186809869	chr19:37172083-37172084	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs546652512	chr19:37172118-37172119	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs569071241	chr19:37172138-37172139	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs535771530	chr19:37172168-37172169	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs550469513	chr19:37172303-37172304	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs4806340	chr19:37172348-37172349	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
35	rs191192971	chr19:37172400-37172401	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs558231178	chr19:37172413-37172414	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs201690435	chr19:37172467-37172468	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs11323923	chr19:37172497-37172498	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs183350678	chr19:37172498-37172499	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs573365855	chr19:37172505-37172506	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs555360316	chr19:37172522-37172523	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs185418355	chr19:37172543-37172544	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs138097571	chr19:37172557-37172558	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs562891213	chr19:37172569-37172570	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs578120904	chr19:37172577-37172578	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs545317480	chr19:37172600-37172601	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs201487005	chr19:37172643-37172644	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs3108554	chr19:37172644-37172645	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs189774056	chr19:37172699-37172700	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs558972295	chr19:37172710-37172711	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Glioma	17123091	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Wilms tumour	21544195	CNVD
Mental retardation	19951919	CNVD
19q13.11 deletion syndrome	22378287	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Ovarian neoplasms	16753589	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD

Chromatin state (count:3222 , 50 per page) page: 1 2 3 4 5 6 7 ... 65

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:37158600-37172800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr19:37158600-37177200	Weak transcription	Fetal Kidney	kidney
3	chr19:37158600-37177400	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr19:37158600-37177400	Weak transcription	NHDF-Ad	bronchial
5	chr19:37158600-37177800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr19:37159000-37177000	Weak transcription	NHLF	lung
7	chr19:37159200-37177600	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr19:37159400-37177600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr19:37159600-37176200	Weak transcription	Gastric	stomach
10	chr19:37159600-37177400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr19:37160000-37177000	Weak transcription	Fetal Heart	heart
12	chr19:37163200-37177200	Weak transcription	Pancreas	Pancrea
13	chr19:37165000-37177200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr19:37165600-37177400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr19:37167600-37177000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr19:37167800-37177200	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr19:37167800-37177400	Weak transcription	Colonic Mucosa	Colon
18	chr19:37168000-37177200	Weak transcription	NH-A	brain
19	chr19:37168400-37173400	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
20	chr19:37168800-37171800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
21	chr19:37168800-37171800	Strong transcription	Brain Angular Gyrus	brain
22	chr19:37168800-37172000	Strong transcription	HUES64 Cell Line	embryonic stem cell
23	chr19:37168800-37172000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
24	chr19:37168800-37172200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr19:37168800-37172200	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
26	chr19:37168800-37172200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr19:37168800-37172200	ZNF genes & repeats	A549	lung
28	chr19:37168800-37173000	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr19:37168800-37173000	Strong transcription	Skeletal Muscle Male	skeletal muscle
30	chr19:37168800-37173200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr19:37168800-37173200	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
32	chr19:37168800-37173200	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
33	chr19:37168800-37174600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr19:37168800-37176400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr19:37168800-37176400	ZNF genes & repeats	Liver	Liver
36	chr19:37169000-37171400	Strong transcription	Stomach Smooth Muscle	stomach
37	chr19:37169000-37171600	ZNF genes & repeats	Rectal Smooth Muscle	rectum
38	chr19:37169000-37171800	Strong transcription	Right Ventricle	heart
39	chr19:37169000-37172400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr19:37169000-37172600	Strong transcription	Left Ventricle	heart
41	chr19:37169000-37173000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr19:37169000-37173200	ZNF genes & repeats	Fetal Brain Female	brain
43	chr19:37169000-37173200	Strong transcription	Placenta	Placenta
44	chr19:37169200-37171400	Strong transcription	Primary B cells from peripheral blood	blood
45	chr19:37169200-37175400	Strong transcription	Primary B cells from cord blood	blood
46	chr19:37169200-37177200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
47	chr19:37169200-37177200	Weak transcription	Sigmoid Colon	Sigmoid Colon
48	chr19:37169200-37177800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr19:37169400-37176800	Weak transcription	HSMMtube	muscle
50	chr19:37169400-37177200	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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