Variant report

Variant nsv470142
Chromosome Location chr19:41482742-41524153
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:194 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41484600-41485000 Enhancers Stomach Mucosa stomach
2 chr19:41484600-41489200 Enhancers Fetal Intestine Large intestine
3 chr19:41484600-41489200 Enhancers Fetal Intestine Small intestine
4 chr19:41484600-41489800 Enhancers Liver Liver
5 chr19:41484800-41485800 Enhancers Colonic Mucosa Colon
6 chr19:41484800-41487200 Enhancers Rectal Mucosa Donor 31 rectum
7 chr19:41485000-41485200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr19:41485000-41485400 Weak transcription Stomach Mucosa stomach
9 chr19:41485200-41485400 Enhancers Duodenum Mucosa Duodenum
10 chr19:41485400-41485800 Flanking Active TSS Duodenum Mucosa Duodenum
11 chr19:41485400-41486200 Enhancers Rectal Mucosa Donor 29 rectum
12 chr19:41485400-41487000 Enhancers Stomach Mucosa stomach
13 chr19:41485600-41487000 Enhancers HepG2 liver
14 chr19:41485800-41486000 Enhancers Duodenum Mucosa Duodenum
15 chr19:41485800-41486800 Weak transcription Colonic Mucosa Colon
16 chr19:41486000-41486600 Enhancers HUES64 Cell Line embryonic stem cell
17 chr19:41486000-41488000 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr19:41486000-41488400 Weak transcription Duodenum Mucosa Duodenum
19 chr19:41486200-41486400 Active TSS Rectal Mucosa Donor 29 rectum
20 chr19:41486200-41486600 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr19:41486200-41486800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
22 chr19:41486200-41487000 Enhancers H9 Cell Line embryonic stem cell
23 chr19:41486200-41488000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
24 chr19:41486200-41488200 Enhancers HUES48 Cell Line embryonic stem cell
25 chr19:41486200-41489800 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr19:41486200-41490000 Enhancers H1 Cell Line embryonic stem cell
27 chr19:41486400-41486800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
28 chr19:41486400-41487000 Enhancers Pancreas Pancrea
29 chr19:41486400-41487400 Enhancers Sigmoid Colon Sigmoid Colon
30 chr19:41486400-41487800 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr19:41486400-41488200 Enhancers HUES6 Cell Line embryonic stem cell
32 chr19:41486600-41486800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
33 chr19:41486600-41486800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
34 chr19:41486600-41487600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr19:41486600-41488800 Enhancers ES-WA7 Cell Line embryonic stem cell
36 chr19:41486600-41489200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
37 chr19:41486800-41487000 Enhancers Colonic Mucosa Colon
38 chr19:41486800-41487200 Active TSS iPS-20b Cell Line embryonic stem cell
39 chr19:41486800-41487200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr19:41486800-41487200 Enhancers Rectal Mucosa Donor 29 rectum
41 chr19:41486800-41489600 Enhancers HUES64 Cell Line embryonic stem cell
42 chr19:41487000-41487400 Weak transcription H9 Cell Line embryonic stem cell
43 chr19:41487000-41488400 Weak transcription Pancreas Pancrea
44 chr19:41487000-41490200 Weak transcription Colonic Mucosa Colon
45 chr19:41487200-41487800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
46 chr19:41487200-41490000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr19:41487200-41490200 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr19:41487400-41490400 Enhancers H9 Cell Line embryonic stem cell
49 chr19:41487600-41488000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr19:41487800-41488000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell

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