Variant report

Variant	nsv470812
Chromosome Location	chr6:35374461-35418118
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:959)
CpG islands
(count:492)
Chromatin interactive
region (count:79)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:959 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:35396271-35396729	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:35382989-35383735	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:35417234-35417536	HepG2	liver:	n/a	n/a
4	ATF3	chr6:35407157-35407351	K562	blood:	n/a	n/a
5	BHLHE40	chr6:35382929-35383603	HepG2	liver:	n/a	n/a
6	BHLHE40	chr6:35396260-35396788	HepG2	liver:	n/a	n/a
7	BHLHE40	chr6:35417248-35417555	HepG2	liver:	n/a	n/a
8	BHLHE40	chr6:35417246-35417608	K562	blood:	n/a	n/a
9	BHLHE40	chr6:35383074-35383353	K562	blood:	n/a	n/a
10	BHLHE40	chr6:35377200-35377221	K562	blood:	n/a	n/a
11	BRCA1	chr6:35382778-35383456	HepG2	liver:	n/a	n/a
12	BRCA1	chr6:35396384-35396854	HepG2	liver:	n/a	n/a
13	BRCA1	chr6:35417300-35417499	Hela-S3	cervix:	n/a	n/a
14	BRCA1	chr6:35417636-35417652	HepG2	liver:	n/a	n/a
15	CBX3	chr6:35396865-35397783	K562	blood:	n/a	n/a
16	CBX3	chr6:35397213-35397703	K562	blood:	n/a	n/a
17	CCNT2	chr6:35387389-35387589	K562	blood:	n/a	n/a
18	CEBPB	chr6:35387162-35387462	HepG2	liver:	n/a	chr6:35387274-35387285
19	CEBPB	chr6:35377013-35377434	K562	blood:	n/a	chr6:35377232-35377243
20	CEBPB	chr6:35377101-35377363	K562	blood:	n/a	chr6:35377232-35377243
21	CEBPB	chr6:35377259-35377291	HepG2	liver:	n/a	n/a
22	CEBPB	chr6:35409639-35409734	A549	lung:	n/a	n/a
23	CEBPB	chr6:35377205-35377230	Hela-S3	cervix:	n/a	n/a
24	CEBPB	chr6:35382973-35383529	MCF-7	breast:	n/a	n/a
25	CEBPB	chr6:35393042-35393567	IMR90	lung:	n/a	n/a
26	CEBPB	chr6:35417132-35417495	Hela-S3	cervix:	n/a	chr6:35417178-35417189
27	CEBPB	chr6:35386923-35387544	IMR90	lung:	n/a	chr6:35387274-35387285
28	CEBPB	chr6:35387252-35387405	K562	blood:	n/a	chr6:35387274-35387285
29	CEBPB	chr6:35377091-35377402	K562	blood:	n/a	chr6:35377232-35377243
30	CEBPB	chr6:35417038-35417355	HepG2	liver:	n/a	chr6:35417178-35417189
31	CEBPB	chr6:35383152-35383434	A549	lung:	n/a	n/a
32	CEBPB	chr6:35395772-35396553	IMR90	lung:	n/a	n/a
33	CEBPB	chr6:35383032-35383409	HepG2	liver:	n/a	n/a
34	CEBPB	chr6:35383002-35383525	HepG2	liver:	n/a	n/a
35	CEBPB	chr6:35383129-35383613	IMR90	lung:	n/a	n/a
36	CEBPB	chr6:35396267-35396685	HepG2	liver:	n/a	n/a
37	CEBPB	chr6:35383079-35383744	HepG2	liver:	n/a	n/a
38	CEBPB	chr6:35387372-35387467	A549	lung:	n/a	n/a
39	CEBPD	chr6:35382987-35383770	HepG2	liver:	n/a	n/a
40	CEBPD	chr6:35382949-35383309	HepG2	liver:	n/a	n/a
41	CHD1	chr6:35417065-35417915	IMR90	lung:	n/a	n/a
42	CHD1	chr6:35386603-35387825	IMR90	lung:	n/a	n/a
43	CHD2	chr6:35396218-35396343	HepG2	liver:	n/a	n/a
44	CREB1	chr6:35382854-35383686	HepG2	liver:	n/a	n/a
45	CTCF	chr6:35383080-35383230	Caco-2	colon:	n/a	chr6:35383152-35383165 chr6:35383151-35383167
46	CTCF	chr6:35417280-35417430	GM12867	blood:	n/a	n/a
47	CTCF	chr6:35387400-35387550	GM12865	blood:	n/a	n/a
48	CTCF	chr6:35383100-35383250	HEK293	kidney:	n/a	chr6:35383152-35383165 chr6:35383151-35383167
49	CTCF	chr6:35417300-35417450	GM12878	blood:	n/a	n/a
50	CTCF	chr6:35407240-35407390	K562	blood:	n/a	n/a

(count:492 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:35392246-35392296	NT2-D1	testis:	n/a
2	chr6:35392246-35392296	Hepatocyte	liver:	n/a
3	chr6:35403738-35403788	NB4	blood:	n/a
4	chr6:35395209-35395259	GM12878	blood:	n/a
5	chr6:35392246-35392296	NT2-D1	testis:	n/a
6	chr6:35392246-35392296	Hepatocyte	liver:	n/a
7	chr6:35403738-35403788	NB4	blood:	n/a
8	chr6:35395209-35395259	GM12878	blood:	n/a
9	chr6:35392381-35392431	MCF-7	breast:	n/a
10	chr6:35395209-35395259	HUVEC	blood vessel:	n/a
11	chr6:35387204-35387254	Hela-S3	cervix:	n/a
12	chr6:35392736-35392786	CMK	blood:	n/a
13	chr6:35417568-35417618	Jurkat	blood:	n/a
14	chr6:35392381-35392431	A549	lung:	n/a
15	chr6:35392381-35392431	U87	brain:	n/a
16	chr6:35417568-35417618	T-47D	breast:	n/a
17	chr6:35395209-35395259	ovcar-3	ovarian:	n/a
18	chr6:35417568-35417618	HepG2	liver:	n/a
19	chr6:35392736-35392786	ECC-1	luminal epithelium:	n/a
20	chr6:35395209-35395259	ProgFib	skin:	n/a
21	chr6:35392381-35392431	HCM	heart:	n/a
22	chr6:35387204-35387254	ovcar-3	ovarian:	n/a
23	chr6:35392246-35392296	Hela-S3	cervix:	n/a
24	chr6:35395209-35395259	PrEC	prostate:	n/a
25	chr6:35403738-35403788	GM12878	blood:	n/a
26	chr6:35417568-35417618	GM19239	blood:	n/a
27	chr6:35392736-35392786	MCF10A-Er-Src	breast:	n/a
28	chr6:35392306-35392356	T-47D	breast:	n/a
29	chr6:35392736-35392786	HIPEpiC	eye:	n/a
30	chr6:35392306-35392356	IMR90	lung:	fetal
31	chr6:35387204-35387254	NHBE	bronchial:	n/a
32	chr6:35392246-35392296	HUVEC	blood vessel:	n/a
33	chr6:35395209-35395259	HRCEpiC	kidney:	n/a
34	chr6:35392381-35392431	HCF	heart:	n/a
35	chr6:35392736-35392786	RPTEC	kidney:	n/a
36	chr6:35392736-35392786	AG09319	gingival:	n/a
37	chr6:35392736-35392786	AG10803	skin:	n/a
38	chr6:35392246-35392296	A549	lung:	n/a
39	chr6:35392306-35392356	HMEC	breast:	n/a
40	chr6:35392736-35392786	HCM	heart:	n/a
41	chr6:35417568-35417618	GM06990	blood:	n/a
42	chr6:35417568-35417618	HEK293	kidney:	embryo
43	chr6:35392306-35392356	PFSK-1	brain:	n/a
44	chr6:35392381-35392431	HepG2	liver:	n/a
45	chr6:35392736-35392786	HAEpiC	amniotic membrane:	n/a
46	chr6:35392736-35392786	GM06990	blood:	n/a
47	chr6:35392246-35392296	HIPEpiC	eye:	n/a
48	chr6:35392246-35392296	MCF10A-Er-Src	breast:	n/a
49	chr6:35392246-35392296	ECC-1	luminal epithelium:	n/a
50	chr6:35387204-35387254	HCM	heart:	n/a

(count:79 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:35309737..35310659-chr6:35382732..35383608,6	MCF-7	breast:
2	chr6:35374932..35377738-chr6:35417292..35420237,2	K562	blood:
3	chr6:35329516..35331357-chr6:35414817..35417634,2	MCF-7	breast:
4	chr6:35387457..35387973-chr6:35417155..35417800,2	MCF-7	breast:
5	chr6:35386287..35387905-chr6:35391814..35393487,2	MCF-7	breast:
6	chr6:35410705..35412521-chr6:35414398..35415976,2	MCF-7	breast:
7	chr6:35387457..35387973-chr6:35417155..35417800,2	MCF-7	breast:
8	chr6:35265080..35265878-chr6:35403707..35404212,2	MCF-7	breast:
9	chr6:35388873..35391570-chr6:35394373..35396733,2	MCF-7	breast:
10	chr6:35369022..35371530-chr6:35380488..35382015,2	MCF-7	breast:
11	chr6:35309674..35310633-chr6:35382681..35383602,6	K562	blood:
12	chr6:35374653..35376818-chr6:35385902..35387934,2	K562	blood:
13	chr6:35299795..35300338-chr6:35417088..35417923,2	MCF-7	breast:
14	chr6:35379744..35382549-chr6:35384456..35386159,2	K562	blood:
15	chr6:35353907..35355834-chr6:35387583..35389412,2	K562	blood:
16	chr6:35382683..35384184-chr6:35386582..35388142,2	K562	blood:
17	chr6:35374379..35377300-chr6:35379343..35382186,2	K562	blood:
18	chr6:35384923..35387386-chr6:35435041..35437575,2	MCF-7	breast:
19	chr6:35374653..35376818-chr6:35385902..35387934,2	K562	blood:
20	chr6:35309667..35310862-chr6:35416860..35417813,16	K562	blood:
21	chr6:35413046..35416291-chr6:35417429..35420462,4	K562	blood:
22	chr6:35417325..35417921-chr6:35435622..35436536,2	MCF-7	breast:
23	chr6:35382683..35384184-chr6:35386582..35388142,2	K562	blood:
24	chr6:35309635..35310651-chr6:35382719..35383608,12	MCF-7	breast:
25	chr6:35309690..35310641-chr6:35416899..35417897,7	MCF-7	breast:
26	chr6:35385294..35388987-chr6:35389022..35393579,4	K562	blood:
27	chr6:35395055..35396641-chr6:35399730..35402095,2	MCF-7	breast:
28	chr6:35390023..35392138-chr6:35401114..35403193,2	K562	blood:
29	chr6:35410187..35412214-chr6:35434908..35436495,2	K562	blood:
30	chr6:35226026..35228002-chr6:35394504..35397292,2	K562	blood:
31	chr6:35386287..35387905-chr6:35391814..35393487,2	MCF-7	breast:
32	chr6:35309295..35311429-chr6:35417090..35418674,2	MCF-7	breast:
33	chr6:35409416..35412723-chr6:35413939..35416621,5	K562	blood:
34	chr6:35311343..35313343-chr6:35379052..35381672,2	MCF-7	breast:
35	chr1:35658635..35659143-chr6:35386008..35386508,2	Hela-S3	cervix:
36	chr6:35414374..35416172-chr6:35418455..35420674,2	K562	blood:
37	chr6:35357119..35359280-chr6:35381756..35383497,2	MCF-7	breast:
38	chr6:35389714..35392038-chr6:35454944..35457241,2	K562	blood:
39	chr6:35376249..35378829-chr6:35387490..35390068,2	K562	blood:
40	chr6:35412651..35414194-chr6:35442637..35444257,2	MCF-7	breast:
41	chr6:35380537..35383478-chr6:35394277..35398227,3	K562	blood:
42	chr6:35308697..35314051-chr6:35417510..35421585,8	K562	blood:
43	chr6:35390023..35392138-chr6:35401114..35403193,2	K562	blood:
44	chr6:35386381..35389131-chr6:35434504..35437447,3	K562	blood:
45	chr6:35310264..35312853-chr6:35403598..35406051,2	K562	blood:
46	chr6:35309852..35312289-chr6:35417832..35421264,4	K562	blood:
47	chr6:35403150..35406143-chr6:35419979..35421585,2	MCF-7	breast:
48	chr6:35388873..35391570-chr6:35394373..35396733,2	MCF-7	breast:
49	chr6:35261989..35262828-chr6:35416846..35417449,3	MCF-7	breast:
50	chr6:35401564..35403389-chr6:35434322..35438039,3	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FANCE-1	chr6:35394662-35394997	NONHSAT112179
2	lnc-PPARD-2	chr6:35399993-35400219	NONHSAT112181
3	lnc-PPARD-1	chr6:35397970-35398533	NONHSAT112180

No data

Variant related genes	Relation type
ENSG00000227154	TF binding region
FANCE	TF binding region
ENSG00000227154	CpG island
FANCE	CpG island
ENSG00000112039	chromatin interactions
ENSG00000116560	chromatin interactions
ENSG00000198755	chromatin interactions
ENSG00000112033	chromatin interactions
ENSG00000065029	chromatin interactions
ENSG00000023892	chromatin interactions
ENSG00000227154	chromatin interactions
ENSG00000007866	chromatin interactions

Extended variants
information (count: 1905 )
Associated
traits (count: 105 )

Variant overlapped rSNPs/rCNVs (count:1905 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2038068	chr6:35374461-35374462	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs2038067	chr6:35374466-35374467	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs566290187	chr6:35374476-35374477	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs531100108	chr6:35374490-35374491	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs73413742	chr6:35374551-35374552	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs537274745	chr6:35374561-35374562	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs62402060	chr6:35374570-35374571	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs570465806	chr6:35374621-35374622	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs181709874	chr6:35374622-35374623	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs553449041	chr6:35374624-35374625	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs553014904	chr6:35374639-35374640	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs150107904	chr6:35374641-35374642	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs573904528	chr6:35374646-35374647	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs531769432	chr6:35374653-35374654	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs372482874	chr6:35374656-35374657	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs114439569	chr6:35374685-35374686	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs546074515	chr6:35374686-35374687	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs185681633	chr6:35374774-35374775	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs113026814	chr6:35374782-35374783	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs572844336	chr6:35374811-35374812	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs73413744	chr6:35374817-35374818	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs192329667	chr6:35374883-35374884	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs149242135	chr6:35374949-35374950	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs544332514	chr6:35374962-35374963	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs563688289	chr6:35374983-35374984	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs536319377	chr6:35375002-35375003	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs542886983	chr6:35375140-35375141	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs552423386	chr6:35375166-35375167	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs370894281	chr6:35375181-35375182	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs181965018	chr6:35375305-35375306	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs556330569	chr6:35375321-35375322	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs376684321	chr6:35375327-35375328	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs568482939	chr6:35375346-35375347	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs535538779	chr6:35375379-35375380	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs186166383	chr6:35375393-35375394	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs190885011	chr6:35375394-35375395	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs370026586	chr6:35375405-35375406	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs550355615	chr6:35375444-35375445	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs538794690	chr6:35375459-35375460	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs541285730	chr6:35375463-35375464	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs539657862	chr6:35375499-35375500	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs6906237	chr6:35375526-35375527	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs565177827	chr6:35375554-35375555	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs556204232	chr6:35375577-35375578	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs201207213	chr6:35375589-35375590	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs79634747	chr6:35375672-35375673	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs144648973	chr6:35375686-35375687	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs555061788	chr6:35375692-35375693	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs78785385	chr6:35375697-35375698	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs368976575	chr6:35375707-35375708	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:105)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1620 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35338400-35378400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr6:35345600-35378400	Weak transcription	Aorta	Aorta
3	chr6:35359800-35378800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr6:35360000-35378200	Weak transcription	Colon Smooth Muscle	Colon
5	chr6:35360000-35378400	Weak transcription	HSMMtube	muscle
6	chr6:35360000-35379000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr6:35360000-35382600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr6:35360600-35378600	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr6:35361000-35378000	Weak transcription	Stomach Smooth Muscle	stomach
10	chr6:35361000-35378600	Weak transcription	Adipose Nuclei	Adipose
11	chr6:35361000-35378600	Weak transcription	NHLF	lung
12	chr6:35361000-35378800	Weak transcription	Psoas Muscle	Psoas
13	chr6:35361200-35376200	Weak transcription	Fetal Muscle Trunk	muscle
14	chr6:35361200-35378600	Weak transcription	Rectal Smooth Muscle	rectum
15	chr6:35361800-35385800	Weak transcription	Small Intestine	intestine
16	chr6:35362000-35378000	Weak transcription	Spleen	Spleen
17	chr6:35362200-35378400	Weak transcription	Primary B cells from cord blood	blood
18	chr6:35362200-35378400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
19	chr6:35362200-35380000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr6:35363400-35378200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
21	chr6:35364000-35378000	Weak transcription	Primary B cells from peripheral blood	blood
22	chr6:35365400-35375800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
23	chr6:35365400-35378600	Weak transcription	NHDF-Ad	bronchial
24	chr6:35365800-35377800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
25	chr6:35365800-35378600	Weak transcription	Primary T helper cells PMA-I stimulated	--
26	chr6:35365800-35378600	Weak transcription	Ovary	ovary
27	chr6:35366200-35378000	Weak transcription	Primary T helper cells fromperipheralblood	blood
28	chr6:35366200-35386800	Weak transcription	H9 Cell Line	embryonic stem cell
29	chr6:35366400-35382800	Weak transcription	HUES6 Cell Line	embryonic stem cell
30	chr6:35366600-35376600	Weak transcription	K562	blood
31	chr6:35366600-35378600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr6:35367800-35378600	Weak transcription	Thymus	Thymus
33	chr6:35369200-35378600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr6:35369200-35378800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr6:35369200-35379000	Weak transcription	Muscle Satellite Cultured Cells	--
36	chr6:35369200-35382600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr6:35369400-35382600	Weak transcription	NH-A	brain
38	chr6:35369600-35378000	Weak transcription	Sigmoid Colon	Sigmoid Colon
39	chr6:35369600-35378200	Weak transcription	Esophagus	oesophagus
40	chr6:35369800-35377600	Weak transcription	Osteobl	bone
41	chr6:35370200-35378200	Weak transcription	Primary T cells fromperipheralblood	blood
42	chr6:35370200-35378400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr6:35370600-35375800	Weak transcription	Fetal Muscle Leg	muscle
44	chr6:35370600-35375800	Weak transcription	HSMM	muscle
45	chr6:35370600-35378000	Weak transcription	Rectal Mucosa Donor 29	rectum
46	chr6:35370600-35393200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr6:35370800-35378600	Weak transcription	Colonic Mucosa	Colon
48	chr6:35371000-35375600	Weak transcription	HMEC	breast
49	chr6:35371000-35376000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
50	chr6:35371000-35378000	Weak transcription	Rectal Mucosa Donor 31	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links