Variant report

Variant	nsv470917
Chromosome Location	chr10:5654167-5715401
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1759)
CpG islands
(count:2140)
Chromatin interactive
region (count:199)
LncRNA
region (count:19)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1759 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:5701790-5702333	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:5701164-5701572	HepG2	liver:	n/a	n/a
3	ARID3A	chr10:5705962-5706115	HepG2	liver:	n/a	n/a
4	ARID3A	chr10:5665106-5665386	HepG2	liver:	n/a	n/a
5	ARID3A	chr10:5665084-5665453	K562	blood:	n/a	n/a
6	ARID3A	chr10:5710369-5710645	HepG2	liver:	n/a	n/a
7	ARID3A	chr10:5669701-5669799	HepG2	liver:	n/a	n/a
8	ARID3A	chr10:5687310-5687479	HepG2	liver:	n/a	n/a
9	ARID3A	chr10:5707453-5707725	HepG2	liver:	n/a	n/a
10	ARID3A	chr10:5674430-5674670	HepG2	liver:	n/a	n/a
11	ATF1	chr10:5657289-5657549	K562	blood:	n/a	n/a
12	ATF2	chr10:5665048-5665479	GM12878	blood:	n/a	n/a
13	ATF3	chr10:5708448-5708805	K562	blood:	n/a	n/a
14	ATF3	chr10:5701883-5702096	K562	blood:	n/a	n/a
15	ATF3	chr10:5701787-5702111	K562	blood:	n/a	n/a
16	ATF3	chr10:5665020-5665576	A549	lung:	n/a	n/a
17	ATF3	chr10:5708504-5708755	HepG2	liver:	n/a	n/a
18	ATF3	chr10:5708602-5709006	A549	lung:	n/a	n/a
19	BACH1	chr10:5689892-5690986	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr10:5707878-5708540	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr10:5665077-5665420	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr10:5665126-5665360	K562	blood:	n/a	n/a
23	BATF	chr10:5701623-5702127	GM12878	blood:	n/a	n/a
24	BATF	chr10:5670758-5671129	GM12878	blood:	n/a	n/a
25	BATF	chr10:5668087-5668358	GM12878	blood:	n/a	chr10:5668206-5668217
26	BATF	chr10:5671298-5671685	GM12878	blood:	n/a	chr10:5671497-5671508
27	BATF	chr10:5665165-5665442	GM12878	blood:	n/a	n/a
28	BCL3	chr10:5708858-5709224	GM12878	blood:	n/a	n/a
29	BCL3	chr10:5708804-5709189	GM12878	blood:	n/a	n/a
30	BCLAF1	chr10:5665078-5665458	GM12878	blood:	n/a	n/a
31	BHLHE40	chr10:5708641-5709243	HepG2	liver:	n/a	n/a
32	BHLHE40	chr10:5701024-5702625	HepG2	liver:	n/a	n/a
33	BHLHE40	chr10:5701799-5702319	K562	blood:	n/a	n/a
34	BHLHE40	chr10:5674486-5674734	HepG2	liver:	n/a	n/a
35	BHLHE40	chr10:5711632-5711940	K562	blood:	n/a	n/a
36	BHLHE40	chr10:5665061-5665436	K562	blood:	n/a	n/a
37	BHLHE40	chr10:5665147-5665417	GM12878	blood:	n/a	n/a
38	BHLHE40	chr10:5708587-5709192	K562	blood:	n/a	n/a
39	BHLHE40	chr10:5707876-5708313	K562	blood:	n/a	n/a
40	BHLHE40	chr10:5657313-5657349	K562	blood:	n/a	n/a
41	BHLHE40	chr10:5701989-5702001	A549	lung:	n/a	n/a
42	BHLHE40	chr10:5665076-5665463	HepG2	liver:	n/a	n/a
43	BHLHE40	chr10:5660951-5661089	K562	blood:	n/a	n/a
44	BHLHE40	chr10:5707938-5708371	HepG2	liver:	n/a	n/a
45	BRCA1	chr10:5665117-5665392	H1-hESC	embryonic stem cell:	n/a	n/a
46	BRCA1	chr10:5708655-5708931	HepG2	liver:	n/a	n/a
47	BRCA1	chr10:5708541-5708817	H1-hESC	embryonic stem cell:	n/a	n/a
48	BRCA1	chr10:5665105-5665309	HepG2	liver:	n/a	n/a
49	BRCA1	chr10:5665139-5665421	Hela-S3	cervix:	n/a	n/a
50	BRCA1	chr10:5701399-5701533	HepG2	liver:	n/a	n/a

(count:2140 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:5683835-5683885	NT2-D1	testis:	n/a
2	chr10:5708881-5708931	H1-hESC	embryonic stem cell:	embryo
3	chr10:5685896-5685946	HRCEpiC	kidney:	n/a
4	chr10:5683763-5683813	LNCaP	prostate:	n/a
5	chr10:5683763-5683813	HRPEpiC	eye:	n/a
6	chr10:5683835-5683885	NT2-D1	testis:	n/a
7	chr10:5708881-5708931	H1-hESC	embryonic stem cell:	embryo
8	chr10:5685896-5685946	HRCEpiC	kidney:	n/a
9	chr10:5683763-5683813	LNCaP	prostate:	n/a
10	chr10:5683763-5683813	HRPEpiC	eye:	n/a
11	chr10:5681116-5681166	PFSK-1	brain:	n/a
12	chr10:5683763-5683813	HCF	heart:	n/a
13	chr10:5707981-5708031	AG10803	skin:	n/a
14	chr10:5656296-5656346	GM19239	blood:	n/a
15	chr10:5708881-5708931	HL-60	blood:	n/a
16	chr10:5666739-5666789	BJ	skin:	n/a
17	chr10:5693331-5693381	GM12891	blood:	n/a
18	chr10:5671107-5671157	HUVEC	blood vessel:	n/a
19	chr10:5658492-5658542	BE2_C	brain:	n/a
20	chr10:5707981-5708031	GM12891	blood:	n/a
21	chr10:5681116-5681166	NH-A	brain:	n/a
22	chr10:5681092-5681142	HepG2	liver:	n/a
23	chr10:5708674-5708724	GM12891	blood:	n/a
24	chr10:5708674-5708724	HUVEC	blood vessel:	n/a
25	chr10:5661741-5661791	SKMC	muscle:	n/a
26	chr10:5683835-5683885	HCT-116	colon:	n/a
27	chr10:5681116-5681166	GM12891	blood:	n/a
28	chr10:5683916-5683966	GM12891	blood:	n/a
29	chr10:5708731-5708781	NHBE	bronchial:	n/a
30	chr10:5683763-5683813	HCT-116	colon:	n/a
31	chr10:5693432-5693482	ECC-1	luminal epithelium:	n/a
32	chr10:5667028-5667078	NB4	blood:	n/a
33	chr10:5666739-5666789	HepG2	liver:	n/a
34	chr10:5708731-5708781	HCT-116	colon:	n/a
35	chr10:5688470-5688520	ECC-1	luminal epithelium:	n/a
36	chr10:5683835-5683885	Caco-2	colon:	n/a
37	chr10:5708825-5708875	IMR90	lung:	fetal
38	chr10:5708327-5708377	HAEpiC	amniotic membrane:	n/a
39	chr10:5666842-5666892	Hepatocyte	liver:	n/a
40	chr10:5708327-5708377	AG09309	skin:	n/a
41	chr10:5681116-5681166	PrEC	prostate:	n/a
42	chr10:5658249-5658299	RPTEC	kidney:	n/a
43	chr10:5690914-5690964	HCPEpiC	choroid plexus:	n/a
44	chr10:5705038-5705088	NH-A	brain:	n/a
45	chr10:5656296-5656346	ECC-1	luminal epithelium:	n/a
46	chr10:5688620-5688670	GM12892	blood:	n/a
47	chr10:5681092-5681142	NB4	blood:	n/a
48	chr10:5681116-5681166	Hela-S3	cervix:	n/a
49	chr10:5661741-5661791	HRE	kidney:	n/a
50	chr10:5683916-5683966	HCPEpiC	choroid plexus:	n/a

(count:199 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr10:5648567..5652209-chr10:5653862..5656338,4	MCF-7	breast:
2	chr10:5644481..5646205-chr10:5661416..5663471,2	K562	blood:
3	chr10:5707419..5708953-chr10:5931052..5933501,2	MCF-7	breast:
4	chr10:5674655..5677112-chr10:5724421..5726297,2	K562	blood:
5	chr10:5483715..5496703-chr10:5653374..5669304,43	MCF-7	breast:
6	chr10:5529812..5532374-chr10:5655827..5658800,2	MCF-7	breast:
7	chr10:5664937..5665458-chr10:5701845..5702533,2	MCF-7	breast:
8	chr10:5686229..5688364-chr10:5688975..5690846,2	MCF-7	breast:
9	chr10:5691219..5693694-chr10:5706407..5709884,5	K562	blood:
10	chr10:5713284..5716220-chr10:5720012..5722178,2	MCF-7	breast:
11	chr10:5694251..5695909-chr10:5704918..5707656,2	K562	blood:
12	chr10:5673035..5675364-chr10:5725053..5728516,4	MCF-7	breast:
13	chr10:5538255..5539151-chr10:5664673..5665206,2	MCF-7	breast:
14	chr10:5695046..5697803-chr10:5701163..5704178,3	K562	blood:
15	chr10:5679095..5680812-chr10:5681190..5683010,2	MCF-7	breast:
16	chr10:5706961..5708705-chr10:5733482..5736246,2	K562	blood:
17	chr10:5679095..5680812-chr10:5681190..5683010,2	MCF-7	breast:
18	chr10:5538884..5540613-chr10:5688809..5691175,2	MCF-7	breast:
19	chr10:5666540..5670442-chr10:5670663..5674489,4	MCF-7	breast:
20	chr10:5681039..5683636-chr10:5687427..5689030,2	K562	blood:
21	chr10:5672469..5675172-chr10:5707074..5708649,2	K562	blood:
22	chr10:5702044..5704701-chr10:5733681..5735975,2	K562	blood:
23	chr10:5681863..5687705-chr10:5689280..5694830,6	K562	blood:
24	chr10:5667938..5668510-chr10:5701995..5702827,2	MCF-7	breast:
25	chr10:5506572..5510809-chr10:5700493..5704095,7	MCF-7	breast:
26	chr10:5706894..5712025-chr10:5724987..5728504,7	MCF-7	breast:
27	chr10:5693572..5694560-chr10:5701990..5702791,2	MCF-7	breast:
28	chr10:5681039..5683636-chr10:5687427..5689030,2	K562	blood:
29	chr10:5490383..5493431-chr10:5695164..5697626,3	MCF-7	breast:
30	chr10:5502051..5504914-chr10:5661389..5662940,2	MCF-7	breast:
31	chr10:5707969..5709619-chr10:5713613..5715231,2	MCF-7	breast:
32	chr10:5701483..5702862-chr10:5726891..5727808,8	MCF-7	breast:
33	chr10:5694251..5695909-chr10:5704918..5707656,2	K562	blood:
34	chr10:5708441..5709982-chr10:5853880..5856185,2	K562	blood:
35	chr10:5671194..5674066-chr10:5677654..5680777,3	K562	blood:
36	chr10:5530065..5530714-chr10:5701918..5702531,2	MCF-7	breast:
37	chr10:5595300..5599425-chr10:5700368..5703903,3	MCF-7	breast:
38	chr10:5704182..5707347-chr10:5769975..5772596,3	MCF-7	breast:
39	chr10:5593662..5595801-chr10:5669870..5671896,3	MCF-7	breast:
40	chr10:5707177..5709381-chr10:5931479..5933432,3	MCF-7	breast:
41	chr10:5679248..5682285-chr10:5683470..5687147,3	MCF-7	breast:
42	chr10:5696591..5698219-chr10:5706106..5707832,2	K562	blood:
43	chr10:5685269..5687615-chr10:5700766..5703664,2	K562	blood:
44	chr10:5491006..5493868-chr10:5664560..5666317,3	K562	blood:
45	chr10:5488284..5491202-chr10:5703456..5706141,2	MCF-7	breast:
46	chr10:5674708..5676673-chr10:5677980..5680886,2	MCF-7	breast:
47	chr10:5541719..5543881-chr10:5694869..5697799,2	MCF-7	breast:
48	chr10:5593411..5593958-chr10:5664829..5665548,2	MCF-7	breast:
49	chr10:5667938..5668510-chr10:5701995..5702827,2	MCF-7	breast:
50	chr10:5664649..5667001-chr10:5672952..5674907,2	K562	blood:

(count:19 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GDI2-4	chr10:5699270-5699369	NONHSAT011172
2	lnc-GDI2-5	chr10:5691656-5691766	NONHSAT011171
3	lnc-FAM208B-4	chr10:5707823-5708703	l_247_chr10:5707185-5708703_testes
4	lnc-ASB13-1	chr10:5659894-5660124	XLOC_008713
5	lnc-ASB13-1	chr10:5659264-5659363	XLOC_008713
6	lnc-GDI2-4	chr10:5699900-5700130	NONHSAT011172
7	lnc-ASB13-5	chr10:5677111-5677548	NONHSAT011162
8	lnc-FAM208B-6	chr10:5673426-5673716	NONHSAT011169
9	lnc-GDI2-5	chr10:5692701-5692762	NONHSAT011171
10	lnc-FAM208B-7	chr10:5666587-5666905	NONHSAT011167
11	lnc-GDI2-4	chr10:5698831-5699156	NONHSAT011172
12	lnc-GDI2-5	chr10:5690444-5690700	NONHSAT011171
13	lnc-GDI2-5	chr10:5692283-5692405	NONHSAT011171
14	lnc-GDI2-5	chr10:5692077-5692136	NONHSAT011171
15	lnc-FAM208B-4	chr10:5707302-5707309	l_247_chr10:5707185-5708703_testes
16	lnc-ASB13-5	chr10:5677980-5678087	NONHSAT011162
17	lnc-ASB13-1	chr10:5658825-5659150	XLOC_008713
18	lnc-FAM208B-7	chr10:5667817-5667847	NONHSAT011167
19	lnc-FAM208B-4	chr10:5707186-5707298	l_247_chr10:5707185-5708703_testes

No data

Variant related genes	Relation type
ENSG00000231483	TF binding region
ASB13	TF binding region
ENSG00000228951	TF binding region
ENSG00000228685	TF binding region
RN7SL445P	TF binding region
ENSG00000231483	CpG island
ASB13	CpG island
ENSG00000228951	CpG island
ENSG00000228685	CpG island
RN7SL445P	CpG island
ENSG00000249492	chromatin interactions
ENSG00000099875	chromatin interactions
ENSG00000226647	chromatin interactions
ENSG00000260267	chromatin interactions
ENSG00000134461	chromatin interactions
ENSG00000242147	chromatin interactions
ENSG00000178372	chromatin interactions
ENSG00000134452	chromatin interactions
ENSG00000057608	chromatin interactions
ENSG00000231483	chromatin interactions
ENSG00000270427	chromatin interactions
ENSG00000272764	chromatin interactions
ENSG00000151881	chromatin interactions
ENSG00000228685	chromatin interactions
ENSG00000173848	chromatin interactions
ENSG00000108021	chromatin interactions
ENSG00000100219	chromatin interactions
ENSG00000226471	chromatin interactions
ENSG00000140691	chromatin interactions
ENSG00000196372	chromatin interactions
ENSG00000228951	chromatin interactions
ENSG00000240577	chromatin interactions

Extended variants
information (count: 2768 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:2768 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6602236	chr10:5654167-5654168	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs115977228	chr10:5654188-5654189	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs545181170	chr10:5654195-5654196	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs140856067	chr10:5654205-5654206	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs188407456	chr10:5654239-5654240	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs551295437	chr10:5654281-5654282	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs566445280	chr10:5654382-5654383	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs538413176	chr10:5654400-5654401	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs533809210	chr10:5654425-5654426	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs11255079	chr10:5654434-5654435	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs536596511	chr10:5654473-5654474	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs556527062	chr10:5654474-5654475	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs116394407	chr10:5654548-5654549	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs79051102	chr10:5654577-5654578	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs375282250	chr10:5654595-5654596	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs537992999	chr10:5654620-5654621	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs568602071	chr10:5654623-5654624	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs191331143	chr10:5654641-5654642	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs185070078	chr10:5654653-5654654	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs545635830	chr10:5654658-5654659	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs560643915	chr10:5654660-5654661	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs572782873	chr10:5654699-5654700	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs542914485	chr10:5654706-5654707	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs144682879	chr10:5654719-5654720	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs7099771	chr10:5654742-5654743	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs550274894	chr10:5654751-5654752	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs565022173	chr10:5654795-5654796	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs189527008	chr10:5654804-5654805	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs148184743	chr10:5654857-5654858	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs539865336	chr10:5654858-5654859	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs200433509	chr10:5654884-5654885	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs60344537	chr10:5654909-5654910	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs377019649	chr10:5654918-5654919	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs533874445	chr10:5654919-5654920	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs398012702	chr10:5654922-5654923	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs377707339	chr10:5654967-5654968	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs567282689	chr10:5654975-5654976	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs549826613	chr10:5655017-5655018	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs555611944	chr10:5655019-5655020	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs537428919	chr10:5655025-5655026	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs569933668	chr10:5655113-5655114	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs371098239	chr10:5655121-5655122	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs556091721	chr10:5655177-5655178	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs141162876	chr10:5655181-5655182	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs538693512	chr10:5655234-5655235	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs554418301	chr10:5655237-5655238	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs572665182	chr10:5655240-5655241	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs543350608	chr10:5655243-5655244	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs554941136	chr10:5655254-5655255	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs576416173	chr10:5655295-5655296	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Sudden cardiac death	19188705	CNVD
Digeorge syndrome	22283845	CNVD
Cancer	21129771	CNVD
Colorectal cancer	20709793	CNVD
Wilms tumour	19047088	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Barakat syndrome	22470819	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	21720365	CNVD
Autism	18414403	CNVD
Malignant melanoma	18718029	CNVD
Breast cancer	22032731	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Melanoma	17363583	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Renal cell carcinoma	18765545	CNVD
lymphocytic leukemia	21291569	CNVD
Urothelial cell carcinoma	18451213	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Ovarian cancer	22355333	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:2530 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:5649000-5657400	Weak transcription	Left Ventricle	heart
2	chr10:5650200-5662600	Enhancers	Fetal Muscle Leg	muscle
3	chr10:5650400-5661800	Enhancers	Fetal Muscle Trunk	muscle
4	chr10:5650800-5655600	Weak transcription	Adipose Nuclei	Adipose
5	chr10:5651200-5656000	Weak transcription	Fetal Lung	lung
6	chr10:5651600-5654200	Enhancers	HSMMtube	muscle
7	chr10:5651800-5654400	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr10:5651800-5654600	Enhancers	Stomach Mucosa	stomach
9	chr10:5651800-5655600	Weak transcription	Fetal Thymus	thymus
10	chr10:5651800-5655600	Weak transcription	Sigmoid Colon	Sigmoid Colon
11	chr10:5651800-5665000	Weak transcription	Spleen	Spleen
12	chr10:5652000-5654600	Enhancers	Muscle Satellite Cultured Cells	--
13	chr10:5652200-5655600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr10:5652200-5655600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr10:5652200-5655600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr10:5652200-5655800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr10:5652200-5655800	Weak transcription	Ovary	ovary
18	chr10:5652200-5660800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr10:5652200-5660800	Weak transcription	Right Ventricle	heart
20	chr10:5652400-5654600	Enhancers	Skeletal Muscle Male	skeletal muscle
21	chr10:5652400-5654800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr10:5652400-5655600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr10:5652400-5655600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr10:5652400-5655600	Weak transcription	Placenta	Placenta
25	chr10:5652400-5655800	Weak transcription	Aorta	Aorta
26	chr10:5652600-5654600	Enhancers	Rectal Mucosa Donor 31	rectum
27	chr10:5652800-5654400	Enhancers	NHEK	skin
28	chr10:5652800-5654600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr10:5652800-5655000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr10:5652800-5656600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr10:5652800-5658600	Enhancers	HMEC	breast
32	chr10:5653000-5654200	Enhancers	Duodenum Mucosa	Duodenum
33	chr10:5653000-5655400	Enhancers	HepG2	liver
34	chr10:5653000-5655600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
35	chr10:5653000-5655600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
36	chr10:5653000-5655600	Weak transcription	Gastric	stomach
37	chr10:5653000-5655800	Weak transcription	NHDF-Ad	bronchial
38	chr10:5653000-5656600	Enhancers	Esophagus	oesophagus
39	chr10:5653200-5654600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr10:5653200-5655400	Weak transcription	Liver	Liver
41	chr10:5653200-5655600	Weak transcription	Stomach Smooth Muscle	stomach
42	chr10:5653400-5655400	Weak transcription	Rectal Mucosa Donor 29	rectum
43	chr10:5653400-5655600	Weak transcription	Colonic Mucosa	Colon
44	chr10:5653400-5657200	Enhancers	A549	lung
45	chr10:5653400-5657400	Weak transcription	Psoas Muscle	Psoas
46	chr10:5653600-5654400	Enhancers	HSMM	muscle
47	chr10:5653800-5654200	Enhancers	NH-A	brain
48	chr10:5653800-5654400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr10:5653800-5654600	Flanking Active TSS	Hela-S3	cervix
50	chr10:5653800-5655000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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