Variant report

Variant nsv471162
Chromosome Location chr13:85994700-86296819
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:596 , 50 per page) page: 1 2 3 4 5 6 7 ... 12
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:85986200-86001400 Weak transcription Fetal Lung lung
2 chr13:86001200-86001600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr13:86001400-86001800 Enhancers Fetal Lung lung
4 chr13:86002200-86004600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr13:86004800-86005000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
6 chr13:86005000-86005200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr13:86005200-86005400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr13:86005200-86005600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
9 chr13:86005400-86006200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr13:86006000-86006200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
11 chr13:86014000-86014200 Enhancers A549 lung
12 chr13:86014200-86015000 Weak transcription A549 lung
13 chr13:86015000-86015200 Enhancers A549 lung
14 chr13:86015200-86016200 Active TSS A549 lung
15 chr13:86022800-86024400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr13:86023000-86024600 Enhancers HUES48 Cell Line embryonic stem cell
17 chr13:86023200-86023800 Enhancers iPS-18 Cell Line embryonic stem cell
18 chr13:86023200-86024200 Enhancers HUES64 Cell Line embryonic stem cell
19 chr13:86023400-86023600 Enhancers iPS-20b Cell Line embryonic stem cell
20 chr13:86023400-86024200 Enhancers iPS-15b Cell Line embryonic stem cell
21 chr13:86023600-86023800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
22 chr13:86023600-86024400 Enhancers HUES6 Cell Line embryonic stem cell
23 chr13:86023800-86024000 Active TSS iPS-20b Cell Line embryonic stem cell
24 chr13:86024000-86024200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
25 chr13:86024400-86028000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr13:86031800-86032200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr13:86032200-86033800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr13:86032800-86033200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr13:86033800-86034600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr13:86034600-86035200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr13:86036000-86037000 Enhancers Duodenum Smooth Muscle Duodenum
32 chr13:86054000-86054400 Enhancers Fetal Heart heart
33 chr13:86060800-86061200 Enhancers Duodenum Smooth Muscle Duodenum
34 chr13:86065800-86066600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr13:86066200-86066800 Enhancers Fetal Heart heart
36 chr13:86069200-86077200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr13:86070600-86071400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr13:86070600-86071600 Enhancers NHLF lung
39 chr13:86070600-86071800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr13:86070600-86072800 Enhancers Hela-S3 cervix
41 chr13:86070800-86071800 Enhancers NH-A brain
42 chr13:86071200-86071400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr13:86071200-86071600 Enhancers NHEK skin
44 chr13:86071200-86073000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr13:86071400-86071800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr13:86071400-86073400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr13:86071600-86072000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr13:86071600-86072000 Flanking Active TSS NHEK skin
49 chr13:86071600-86072400 Weak transcription NHLF lung
50 chr13:86071800-86072600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin

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