Variant report

Variant	nsv481707
Chromosome Location	chr6:162690235-163020364
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:162910482-162910786	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:162857639-162857816	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:162794306-162794665	HepG2	liver:	n/a	n/a
4	ATF1	chr6:162784797-162785113	K562	blood:	n/a	n/a
5	ATF1	chr6:162782228-162782581	K562	blood:	n/a	n/a
6	ATF1	chr6:162812215-162812339	K562	blood:	n/a	n/a
7	ATF1	chr6:162812647-162812847	K562	blood:	n/a	n/a
8	ATF3	chr6:162784742-162785052	K562	blood:	n/a	n/a
9	BACH1	chr6:162975725-162976098	K562	blood:	n/a	n/a
10	BHLHE40	chr6:162899266-162899534	GM12878	blood:	n/a	n/a
11	BRCA1	chr6:162871740-162871751	H1-hESC	embryonic stem cell:	n/a	n/a
12	CBX3	chr6:162784775-162785143	K562	blood:	n/a	n/a
13	CBX3	chr6:162785538-162785848	K562	blood:	n/a	n/a
14	CCNT2	chr6:163001825-163002025	K562	blood:	n/a	n/a
15	CEBPB	chr6:162766327-162766640	HepG2	liver:	n/a	chr6:162766482-162766491 chr6:162766482-162766491 chr6:162766481-162766492 chr6:162766482-162766491 chr6:162766480-162766491 chr6:162766482-162766491 chr6:162766480-162766493
16	CEBPB	chr6:162775249-162775526	HepG2	liver:	n/a	chr6:162775385-162775396
17	CEBPB	chr6:162857299-162857541	HepG2	liver:	n/a	chr6:162857420-162857431
18	CEBPB	chr6:162784839-162785153	HepG2	liver:	n/a	chr6:162785029-162785040
19	CEBPB	chr6:162825981-162826255	HepG2	liver:	n/a	chr6:162826093-162826104
20	CEBPB	chr6:162779025-162779284	HepG2	liver:	n/a	chr6:162779118-162779129
21	CEBPB	chr6:162944101-162944302	HepG2	liver:	n/a	n/a
22	CEBPB	chr6:162766335-162766614	A549	lung:	n/a	chr6:162766482-162766491 chr6:162766482-162766491 chr6:162766481-162766492 chr6:162766482-162766491 chr6:162766480-162766491 chr6:162766482-162766491 chr6:162766480-162766493
23	CEBPB	chr6:162794250-162794499	HepG2	liver:	n/a	chr6:162794312-162794323
24	CEBPB	chr6:162871443-162871750	MCF-7	breast:	n/a	chr6:162871605-162871616
25	CEBPB	chr6:162857234-162857635	HepG2	liver:	n/a	chr6:162857420-162857431
26	CEBPB	chr6:162876192-162876578	MCF-7	breast:	n/a	n/a
27	CEBPB	chr6:162784873-162785124	H1-hESC	embryonic stem cell:	n/a	chr6:162785029-162785040
28	CEBPB	chr6:162766353-162766628	IMR90	lung:	n/a	chr6:162766482-162766491 chr6:162766482-162766491 chr6:162766481-162766492 chr6:162766482-162766491 chr6:162766480-162766491 chr6:162766482-162766491 chr6:162766480-162766493
29	CEBPB	chr6:162745722-162745922	HepG2	liver:	n/a	chr6:162745751-162745762
30	CEBPB	chr6:162857291-162857590	HepG2	liver:	n/a	chr6:162857420-162857431
31	CEBPB	chr6:162871429-162871791	HepG2	liver:	n/a	chr6:162871605-162871616
32	CEBPB	chr6:162910460-162910714	HepG2	liver:	n/a	n/a
33	CEBPB	chr6:162868765-162868950	HepG2	liver:	n/a	chr6:162868884-162868895
34	CEBPB	chr6:162896813-162896974	HepG2	liver:	n/a	chr6:162896839-162896850
35	CEBPB	chr6:162961979-162962215	HepG2	liver:	n/a	chr6:162962080-162962091
36	CEBPB	chr6:162726891-162727117	HepG2	liver:	n/a	chr6:162726998-162727009 chr6:162726998-162727011 chr6:162727074-162727083 chr6:162727018-162727029 chr6:162727072-162727085
37	CEBPB	chr6:162876249-162876534	IMR90	lung:	n/a	n/a
38	CEBPB	chr6:162861366-162861450	H1-hESC	embryonic stem cell:	n/a	chr6:162861390-162861403
39	CEBPB	chr6:162910493-162910789	HepG2	liver:	n/a	n/a
40	CEBPB	chr6:162784761-162785142	K562	blood:	n/a	chr6:162785029-162785040
41	CEBPB	chr6:162857280-162857594	HepG2	liver:	n/a	chr6:162857420-162857431
42	CEBPB	chr6:162943679-162943865	HepG2	liver:	n/a	n/a
43	CEBPB	chr6:162784733-162785018	K562	blood:	n/a	n/a
44	CEBPB	chr6:162939387-162939585	HepG2	liver:	n/a	chr6:162939453-162939464
45	CEBPB	chr6:162766332-162766577	H1-hESC	embryonic stem cell:	n/a	chr6:162766482-162766491 chr6:162766482-162766491 chr6:162766481-162766492 chr6:162766482-162766491 chr6:162766480-162766491 chr6:162766482-162766491 chr6:162766480-162766493
46	CEBPB	chr6:162871496-162871684	HepG2	liver:	n/a	chr6:162871605-162871616
47	CEBPB	chr6:162910422-162910805	HepG2	liver:	n/a	n/a
48	CEBPB	chr6:162779076-162779247	A549	lung:	n/a	chr6:162779118-162779129
49	CEBPB	chr6:162839236-162839248	A549	lung:	n/a	n/a
50	CEBPB	chr6:162871405-162871712	H1-hESC	embryonic stem cell:	n/a	chr6:162871605-162871616

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:162964378-162964428	CMK	blood:	n/a
2	chr6:162964378-162964428	CMK	blood:	n/a
3	chr6:162863505-162863555	SK-N-SH_RA	brain:	n/a
4	chr6:162865258-162865308	GM12878	blood:	n/a
5	chr6:162863505-162863555	A549	lung:	n/a
6	chr6:162831837-162831887	SK-N-MC	brain:	n/a
7	chr6:162831837-162831887	PANC-1	pancreas:	n/a
8	chr6:162864586-162864636	HMEC	breast:	n/a
9	chr6:162964378-162964428	PFSK-1	brain:	n/a
10	chr6:162863505-162863555	Caco-2	colon:	n/a
11	chr6:162964378-162964428	PrEC	prostate:	n/a
12	chr6:162865258-162865308	HRE	kidney:	n/a
13	chr6:162831837-162831887	GM12878	blood:	n/a
14	chr6:162831837-162831887	MCF-7	breast:	n/a
15	chr6:162865171-162865221	HNPCEpiC	eye:	n/a
16	chr6:162964378-162964428	BE2_C	brain:	n/a
17	chr6:162863505-162863555	ECC-1	luminal epithelium:	n/a
18	chr6:162831837-162831887	ECC-1	luminal epithelium:	n/a
19	chr6:162865258-162865308	T-47D	breast:	n/a
20	chr6:162831837-162831887	AoSMC	blood vessel:	n/a
21	chr6:162863505-162863555	AoSMC	blood vessel:	n/a
22	chr6:162864586-162864636	K562	blood:	n/a
23	chr6:162831837-162831887	HCPEpiC	choroid plexus:	n/a
24	chr6:162863505-162863555	PANC-1	pancreas:	n/a
25	chr6:162863505-162863555	T-47D	breast:	n/a
26	chr6:162964378-162964428	HAEpiC	amniotic membrane:	n/a
27	chr6:162863505-162863555	HNPCEpiC	eye:	n/a
28	chr6:162831837-162831887	HMEC	breast:	n/a
29	chr6:162865171-162865221	ECC-1	luminal epithelium:	n/a
30	chr6:162865171-162865221	PrEC	prostate:	n/a
31	chr6:162865258-162865308	HNPCEpiC	eye:	n/a
32	chr6:162865171-162865221	NHDF-neo	bronchial:	n/a
33	chr6:162831837-162831887	ProgFib	skin:	n/a
34	chr6:162863505-162863555	MCF10A-Er-Src	breast:	n/a
35	chr6:162964378-162964428	NH-A	brain:	n/a
36	chr6:162831837-162831887	CMK	blood:	n/a
37	chr6:162863505-162863555	ProgFib	skin:	n/a
38	chr6:162863505-162863555	GM19239	blood:	n/a
39	chr6:162863505-162863555	HPAEpiC	pulmonary alveolar:	n/a
40	chr6:162831837-162831887	HCF	heart:	n/a
41	chr6:162864586-162864636	HepG2	liver:	n/a
42	chr6:162864586-162864636	RPTEC	kidney:	n/a
43	chr6:162831837-162831887	PFSK-1	brain:	n/a
44	chr6:162864586-162864636	HRCEpiC	kidney:	n/a
45	chr6:162863505-162863555	GM12878	blood:	n/a
46	chr6:162831837-162831887	K562	blood:	n/a
47	chr6:162831837-162831887	NHBE	bronchial:	n/a
48	chr6:162865258-162865308	HepG2	liver:	n/a
49	chr6:162865258-162865308	AG09309	skin:	n/a
50	chr6:162865171-162865221	HUVEC	blood vessel:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:162960178..162962006-chr6:162962880..162965078,2	K562	blood:
2	chr6:162960178..162962006-chr6:162962880..162965078,2	K562	blood:
3	chr6:163002877..163005708-chr6:163021910..163024946,3	K562	blood:
4	chr6:162902802..162905070-chr6:162905406..162907332,2	K562	blood:
5	chr6:162820265..162823089-chr6:162827852..162829559,2	K562	blood:
6	chr6:162721411..162723925-chr6:162726328..162729326,2	K562	blood:
7	chr6:162768506..162770213-chr6:162786241..162788330,2	K562	blood:
8	chr6:162763017..162765353-chr6:162767098..162769301,2	K562	blood:
9	chr6:162721411..162723925-chr6:162726328..162729326,2	K562	blood:
10	chr6:162820265..162823089-chr6:162827852..162829559,2	K562	blood:
11	chr6:162671180..162673472-chr6:162808694..162811227,2	K562	blood:
12	chr6:162799485..162803733-chr6:162804296..162807777,5	K562	blood:
13	chr6:162768506..162770213-chr6:162786241..162788330,2	K562	blood:
14	chr6:162863816..162864618-chr6:163271757..163272511,2	MCF-7	breast:
15	chr6:162799485..162803733-chr6:162804296..162807777,5	K562	blood:
16	chr6:162763017..162765353-chr6:162767098..162769301,2	K562	blood:
17	chr6:162863367..162864320-chr6:163157771..163158572,4	MCF-7	breast:
18	chr6:162902802..162905070-chr6:162905406..162907332,2	K562	blood:

Variant related genes	Relation type
KRT8P44	TF binding region
KRT8P44	CpG island

Extended variants
information (count: 13849 )
Associated
traits (count: 102 )

Variant overlapped rSNPs/rCNVs (count:13849 , 50 per page) page: 1 2 3 4 5 6 7 ... 277

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs559396275	chr6:162690269-162690270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs573145696	chr6:162690282-162690283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs545185379	chr6:162690283-162690284	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs550220695	chr6:162690298-162690299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs565245536	chr6:162690344-162690345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs531085648	chr6:162690345-162690346	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs550568634	chr6:162690408-162690409	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs75879042	chr6:162690417-162690418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs529673791	chr6:162690448-162690449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs34140943	chr6:162690468-162690469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs149188902	chr6:162690504-162690505	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs566563237	chr6:162690528-162690529	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs143398204	chr6:162690542-162690543	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs552356054	chr6:162690556-162690557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs569194325	chr6:162690580-162690581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs537714433	chr6:162690592-162690593	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs148364255	chr6:162690609-162690610	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs1954954	chr6:162690634-162690635	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs536644054	chr6:162690644-162690645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs553088679	chr6:162690662-162690663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs143022392	chr6:162690786-162690787	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs558695005	chr6:162690799-162690800	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs77690304	chr6:162690807-162690808	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs58088140	chr6:162690817-162690818	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs561627033	chr6:162690819-162690820	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs533922185	chr6:162690868-162690869	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs4708947	chr6:162690885-162690886	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs540195138	chr6:162690905-162690906	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs192472745	chr6:162690939-162690940	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs532219568	chr6:162690967-162690968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs552415457	chr6:162691019-162691020	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs7744581	chr6:162691033-162691034	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs138277804	chr6:162691043-162691044	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs143927342	chr6:162691062-162691063	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs568333422	chr6:162691108-162691109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs556164118	chr6:162691112-162691113	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs565556853	chr6:162691114-162691115	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs552900488	chr6:162691140-162691141	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs139169926	chr6:162691150-162691151	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs538784866	chr6:162691164-162691165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs536325721	chr6:162691176-162691177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs575797793	chr6:162691200-162691201	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs544783476	chr6:162691242-162691243	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs59827674	chr6:162691244-162691245	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs575031263	chr6:162691259-162691260	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs183723639	chr6:162691303-162691304	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs144148770	chr6:162691352-162691353	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs527736570	chr6:162691375-162691376	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs11966606	chr6:162691418-162691419	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs556445936	chr6:162691442-162691443	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:102)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Developmental delay	21147756	CNVD
Chordoma	18071362	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Breast cancer	16397240	CNVD
Atherosclerosis	21956041	CNVD
Maculopathy	20981449	CNVD
Retinoblastoma	22278416	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Ovarian cancer	20844748	CNVD
Uveal melanoma	20484589	CNVD
Glioblastoma multiforme	19435819	CNVD
Astrocytoma	16205629	CNVD
Parkinson disease	17160897	CNVD
Cancer	20164920	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	20838587	CNVD
Early-onset parkinson disease	21993715	CNVD
Glioblastoma	18772890	CNVD
Pancreatic cancer	20981101	CNVD
Autism	21360662	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Parkinson disease	0	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Schizophrenia	20967226	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
Autism	22495309	CNVD
Glioblastoma multiforme	21138945	CNVD
Ovarian cancer	22355333	CNVD
Schizophrenia	19805367	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Schizophrenia	21346763	CNVD

Chromatin state (count:1111 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:162674000-162694600	Weak transcription	Aorta	Aorta
2	chr6:162677800-162705400	Weak transcription	Pancreas	Pancrea
3	chr6:162688400-162691400	Weak transcription	Adipose Nuclei	Adipose
4	chr6:162688400-162693000	Weak transcription	Ovary	ovary
5	chr6:162692200-162693200	Enhancers	Fetal Muscle Leg	muscle
6	chr6:162697400-162699800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr6:162698600-162699800	Enhancers	Fetal Heart	heart
8	chr6:162702600-162703000	Weak transcription	Left Ventricle	heart
9	chr6:162702800-162703200	Enhancers	Brain Substantia Nigra	brain
10	chr6:162703000-162703200	Enhancers	Left Ventricle	heart
11	chr6:162705400-162706200	Enhancers	Pancreas	Pancrea
12	chr6:162705600-162706000	Enhancers	HepG2	liver
13	chr6:162705800-162706000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr6:162708800-162709000	Enhancers	Fetal Muscle Trunk	muscle
15	chr6:162708800-162711400	Enhancers	Fetal Muscle Leg	muscle
16	chr6:162709000-162714400	Weak transcription	Fetal Muscle Trunk	muscle
17	chr6:162709800-162710400	Enhancers	Skeletal Muscle Male	skeletal muscle
18	chr6:162710000-162711600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr6:162710000-162712400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr6:162710200-162710800	Enhancers	Brain Substantia Nigra	brain
21	chr6:162710400-162719200	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr6:162710600-162710800	Enhancers	Brain Cingulate Gyrus	brain
23	chr6:162710600-162711800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr6:162710600-162712400	Enhancers	Cortex derived primary cultured neurospheres	brain
25	chr6:162710800-162711000	Flanking Active TSS	Brain Hippocampus Middle	brain
26	chr6:162710800-162711000	Enhancers	Psoas Muscle	Psoas
27	chr6:162710800-162711000	Enhancers	Right Atrium	heart
28	chr6:162710800-162711000	Enhancers	Right Ventricle	heart
29	chr6:162710800-162711200	Active TSS	Brain Anterior Caudate	brain
30	chr6:162710800-162711200	Flanking Active TSS	Brain Cingulate Gyrus	brain
31	chr6:162710800-162711200	Enhancers	Brain Inferior Temporal Lobe	brain
32	chr6:162710800-162711400	Enhancers	Brain Angular Gyrus	brain
33	chr6:162710800-162711400	Flanking Active TSS	Brain Substantia Nigra	brain
34	chr6:162710800-162712400	Enhancers	Rectal Smooth Muscle	rectum
35	chr6:162711000-162711200	Active TSS	Brain Hippocampus Middle	brain
36	chr6:162711000-162711200	Enhancers	Duodenum Smooth Muscle	Duodenum
37	chr6:162711000-162711400	Enhancers	Fetal Kidney	kidney
38	chr6:162711000-162712200	Weak transcription	Right Atrium	heart
39	chr6:162711000-162712600	Enhancers	Fetal Lung	lung
40	chr6:162711000-162714600	Weak transcription	Right Ventricle	heart
41	chr6:162711200-162711400	Flanking Active TSS	Brain Hippocampus Middle	brain
42	chr6:162711200-162711400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
43	chr6:162711200-162712200	Weak transcription	Psoas Muscle	Psoas
44	chr6:162711200-162712400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr6:162711200-162712400	Enhancers	Brain Anterior Caudate	brain
46	chr6:162711200-162712400	Enhancers	Brain Cingulate Gyrus	brain
47	chr6:162711200-162713200	Weak transcription	Duodenum Smooth Muscle	Duodenum
48	chr6:162711400-162711800	Weak transcription	Brain Angular Gyrus	brain
49	chr6:162711400-162712200	Enhancers	Brain Hippocampus Middle	brain
50	chr6:162711400-162712200	Enhancers	Brain Inferior Temporal Lobe	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links