Variant report

Variant	nsv482541
Chromosome Location	chr3:483723-634438
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:534692-534822	HepG2	liver:	n/a	n/a
2	BACH1	chr3:577662-577951	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr3:516562-516874	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr3:541423-541496	H1-hESC	embryonic stem cell:	n/a	n/a
5	BATF	chr3:515030-515408	GM12878	blood:	n/a	chr3:515252-515263
6	BATF	chr3:505464-505768	GM12878	blood:	n/a	n/a
7	BATF	chr3:515014-515376	GM12878	blood:	n/a	chr3:515252-515263
8	BATF	chr3:599827-600084	GM12878	blood:	n/a	chr3:599953-599962
9	BATF	chr3:599789-600089	GM12878	blood:	n/a	chr3:599953-599962
10	BCLAF1	chr3:599656-600200	GM12878	blood:	n/a	chr3:599779-599788 chr3:599826-599835
11	BHLHE40	chr3:543200-543216	GM12878	blood:	n/a	n/a
12	CEBPB	chr3:544957-545231	H1-hESC	embryonic stem cell:	n/a	chr3:545063-545076 chr3:545064-545075
13	CEBPB	chr3:555007-555386	Hela-S3	cervix:	n/a	n/a
14	CEBPB	chr3:560575-560880	HepG2	liver:	n/a	chr3:560731-560742
15	CEBPB	chr3:534600-534964	HepG2	liver:	n/a	chr3:534767-534778
16	CEBPB	chr3:534354-535027	Hela-S3	cervix:	n/a	chr3:534767-534778
17	CEBPB	chr3:544911-545212	IMR90	lung:	n/a	chr3:545063-545076 chr3:545064-545075
18	CEBPB	chr3:575781-576057	Hela-S3	cervix:	n/a	n/a
19	CEBPB	chr3:526427-526685	HepG2	liver:	n/a	n/a
20	CEBPB	chr3:545112-545116	K562	blood:	n/a	n/a
21	CEBPB	chr3:560581-560882	A549	lung:	n/a	chr3:560731-560742
22	CEBPB	chr3:544919-545200	A549	lung:	n/a	chr3:545063-545076 chr3:545064-545075
23	CEBPB	chr3:611097-611344	HepG2	liver:	n/a	chr3:611201-611212
24	CEBPB	chr3:544910-545217	Hela-S3	cervix:	n/a	chr3:545063-545076 chr3:545064-545075
25	CEBPB	chr3:494829-495089	A549	lung:	n/a	n/a
26	CEBPB	chr3:544942-545225	HepG2	liver:	n/a	chr3:545063-545076 chr3:545064-545075
27	CEBPB	chr3:591255-591764	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr3:526407-526558	H1-hESC	embryonic stem cell:	n/a	n/a
29	CHD1	chr3:503173-503210	H1-hESC	embryonic stem cell:	n/a	n/a
30	CHD2	chr3:577375-577868	H1-hESC	embryonic stem cell:	n/a	n/a
31	CREB1	chr3:509878-510131	H1-hESC	embryonic stem cell:	n/a	n/a
32	CTCF	chr3:577740-577890	NHDF-neo	bronchial:	n/a	n/a
33	CTCF	chr3:523500-523650	AG10803	skin:	n/a	chr3:523551-523572 chr3:523550-523566 chr3:523552-523565 chr3:523549-523567
34	CTCF	chr3:577744-577914	K562	blood:	n/a	n/a
35	CTCF	chr3:577780-577930	SK-N-SH_RA	brain:	n/a	n/a
36	CTCF	chr3:577816-577821	K562	blood:	n/a	n/a
37	CTCF	chr3:577760-577910	GM12874	blood:	n/a	n/a
38	CTCF	chr3:523512-523516	GM10248	blood:	n/a	n/a
39	CTCF	chr3:577780-577930	WERI-Rb-1	eye:	n/a	n/a
40	CTCF	chr3:535565-535597	Lung_OC	lung:	n/a	n/a
41	CTCF	chr3:509960-510110	RPTEC	kidney:	n/a	chr3:510034-510052 chr3:510037-510050 chr3:510036-510057
42	CTCF	chr3:509940-510090	SK-N-SH_RA	brain:	n/a	chr3:510034-510052 chr3:510037-510050 chr3:510036-510057
43	CTCF	chr3:577760-577910	SK-N-SH_RA	brain:	n/a	n/a
44	CTCF	chr3:577782-577919	LNCaP	prostate:	n/a	n/a
45	CTCF	chr3:509980-510130	HL-60	blood:	n/a	chr3:510034-510052 chr3:510037-510050 chr3:510036-510057
46	CTCF	chr3:509931-510118	MCF-7	breast:	n/a	chr3:510034-510052 chr3:510037-510050 chr3:510036-510057
47	CTCF	chr3:510020-510170	MCF-7	breast:	n/a	chr3:510034-510052 chr3:510037-510050 chr3:510036-510057
48	CTCF	chr3:616980-617130	Caco-2	colon:	n/a	n/a
49	CTCF	chr3:616940-617090	A549	lung:	n/a	n/a
50	CTCF	chr3:577780-577930	GM12870	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:523012-523062	MCF-7	breast:	n/a
2	chr3:523012-523062	MCF-7	breast:	n/a
3	chr3:501673-501723	HEEpiC	esophagus:	n/a
4	chr3:577629-577679	NH-A	brain:	n/a
5	chr3:501673-501723	SKMC	muscle:	n/a
6	chr3:523012-523062	HRCEpiC	kidney:	n/a
7	chr3:491979-492029	HL-60	blood:	n/a
8	chr3:523012-523062	K562	blood:	n/a
9	chr3:577629-577679	SK-N-SH	brain:	n/a
10	chr3:501673-501723	NH-A	brain:	n/a
11	chr3:577964-578014	K562	blood:	n/a
12	chr3:577629-577679	T-47D	breast:	n/a
13	chr3:577629-577679	HIPEpiC	eye:	n/a
14	chr3:491979-492029	BJ	skin:	n/a
15	chr3:523375-523425	AG10803	skin:	n/a
16	chr3:491979-492029	HCPEpiC	choroid plexus:	n/a
17	chr3:577821-577871	GM19239	blood:	n/a
18	chr3:577629-577679	HL-60	blood:	n/a
19	chr3:491979-492029	MCF-7	breast:	n/a
20	chr3:577964-578014	GM12878	blood:	n/a
21	chr3:501673-501723	SK-N-SH	brain:	n/a
22	chr3:577821-577871	NH-A	brain:	n/a
23	chr3:523375-523425	Caco-2	colon:	n/a
24	chr3:577821-577871	NB4	blood:	n/a
25	chr3:577629-577679	HMEC	breast:	n/a
26	chr3:577821-577871	Jurkat	blood:	n/a
27	chr3:501673-501723	HPAEpiC	pulmonary alveolar:	n/a
28	chr3:523375-523425	GM06990	blood:	n/a
29	chr3:491979-492029	RPTEC	kidney:	n/a
30	chr3:577821-577871	HMEC	breast:	n/a
31	chr3:577964-578014	HNPCEpiC	eye:	n/a
32	chr3:577821-577871	LNCaP	prostate:	n/a
33	chr3:577821-577871	HepG2	liver:	n/a
34	chr3:523375-523425	PFSK-1	brain:	n/a
35	chr3:523012-523062	HCPEpiC	choroid plexus:	n/a
36	chr3:491979-492029	NB4	blood:	n/a
37	chr3:577821-577871	MCF10A-Er-Src	breast:	n/a
38	chr3:523375-523425	GM12891	blood:	n/a
39	chr3:523012-523062	HRE	kidney:	n/a
40	chr3:491979-492029	HCT-116	colon:	n/a
41	chr3:577629-577679	GM12891	blood:	n/a
42	chr3:577821-577871	BE2_C	brain:	n/a
43	chr3:523375-523425	HPAEpiC	pulmonary alveolar:	n/a
44	chr3:523012-523062	MCF10A-Er-Src	breast:	n/a
45	chr3:577964-578014	MCF10A-Er-Src	breast:	n/a
46	chr3:577629-577679	ovcar-3	ovarian:	n/a
47	chr3:577821-577871	U87	brain:	n/a
48	chr3:523375-523425	NH-A	brain:	n/a
49	chr3:501673-501723	Caco-2	colon:	n/a
50	chr3:577629-577679	SAEC	small airway:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
2	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
3	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
4	chr21:9533639..9536328-chr3:614645..617390,2	MCF-7	breast:
5	chr21:9517250..9519290-chr3:632442..635070,2	MCF-7	breast:
6	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
7	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
8	chr21:9537493..9539688-chr3:612236..614804,2	MCF-7	breast:
9	chr3:512741..514299-chr3:528430..530623,2	K562	blood:
10	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
11	chr3:496434..499262-chr3:500586..502601,2	K562	blood:
12	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
13	chr3:496434..499262-chr3:500586..502601,2	K562	blood:
14	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
15	chr3:512741..514299-chr3:528430..530623,2	K562	blood:
16	chr3:554700..557337-chr3:557649..560284,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CHL1-3	chr3:633788-633866	ENSG00000224957
2	lnc-CHL1-6	chr3:608788-608866	ucscGeneNc_uc003boy_1
3	lnc-CHL1-6	chr3:552914-553010	ucscGeneNc_uc003boy_1
4	lnc-CHL1-3	chr3:633788-633866	NR_110118
5	lnc-CHL1-3	chr3:577936-578010	ENSG00000224957
6	lnc-CHL1-3	chr3:577941-579275	NONHSAT087570

Variant related genes	Relation type
ENSG00000224957	TF binding region
ENSG00000224957	CpG island
DCBLD2	miRNA target sites

Extended variants
information (count: 3869 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:3869 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs148899305	chr3:491438-491439	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs556691857	chr3:491475-491476	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs575251731	chr3:491492-491493	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs539182946	chr3:491494-491495	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs73106987	chr3:491504-491505	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs74544545	chr3:491518-491519	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs369642231	chr3:491542-491543	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs560138901	chr3:491566-491567	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs142735975	chr3:491577-491578	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs542168492	chr3:491591-491592	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs114868859	chr3:491616-491617	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs530998927	chr3:491622-491623	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs555180013	chr3:491639-491640	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs146485708	chr3:491683-491684	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs75670059	chr3:491711-491712	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs189804330	chr3:491725-491726	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs34197359	chr3:491754-491755	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs140961725	chr3:491769-491770	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs544468293	chr3:491783-491784	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs73106988	chr3:491798-491799	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs144787729	chr3:491838-491839	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs562873492	chr3:491857-491858	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs550521599	chr3:491898-491899	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs146685367	chr3:491910-491911	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs182042520	chr3:491918-491919	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs78539548	chr3:491937-491938	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs185307732	chr3:491941-491942	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs551058299	chr3:491976-491977	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs373141956	chr3:492010-492011	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs140219455	chr3:492098-492099	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs150291695	chr3:492118-492119	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs575141559	chr3:492126-492127	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs137949144	chr3:492136-492137	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs557306553	chr3:492140-492141	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs575575869	chr3:492163-492164	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs367815120	chr3:492165-492166	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs569874579	chr3:492222-492223	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs112968521	chr3:492284-492285	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs544719556	chr3:492343-492344	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs114792933	chr3:492354-492355	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs190553519	chr3:492368-492369	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs116506529	chr3:492373-492374	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs542759649	chr3:492393-492394	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs539990650	chr3:492414-492415	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs537198051	chr3:492415-492416	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs531807582	chr3:492422-492423	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs561567261	chr3:492447-492448	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs182034432	chr3:492449-492450	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs551876226	chr3:492458-492459	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs561439077	chr3:492472-492473	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Cancer	20164920	CNVD
Lung cancer	16618734	CNVD
Autism	18349135	CNVD
Breast cancer	20409316	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Intellectual disability	22045946	CNVD
Squamous cell cancer	19607727	CNVD
Gastric adenocarcinoma	19115996	CNVD
sporadic birth defects	19047251	CNVD
Mental retardation	17124404	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Sudden cardiac death	19188705	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Autism	22543975	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Tetralogy of Fallot	22912587	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	20685689	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:379 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:491400-492000	ZNF genes & repeats	Aorta	Aorta
2	chr3:492000-492800	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr3:492000-504600	Weak transcription	Aorta	Aorta
4	chr3:492200-493200	Enhancers	H1 Cell Line	embryonic stem cell
5	chr3:492200-493200	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr3:492200-493400	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr3:492400-493200	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr3:492600-493000	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr3:492800-496800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr3:493000-500400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr3:493200-494000	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr3:493200-496400	Weak transcription	HUES48 Cell Line	embryonic stem cell
13	chr3:493200-500400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr3:493400-493800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr3:493800-494000	Enhancers	iPS-18 Cell Line	embryonic stem cell
16	chr3:494000-494200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
17	chr3:494000-494200	Enhancers	H1 Cell Line	embryonic stem cell
18	chr3:494000-496600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr3:494200-500600	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr3:496400-497600	Enhancers	HUES48 Cell Line	embryonic stem cell
21	chr3:496600-497800	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr3:496800-498000	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr3:497000-498200	Enhancers	Fetal Intestine Small	intestine
24	chr3:497400-497800	Enhancers	Fetal Intestine Large	intestine
25	chr3:497600-497800	Enhancers	Brain Germinal Matrix	brain
26	chr3:497600-500400	Weak transcription	HUES48 Cell Line	embryonic stem cell
27	chr3:497800-498000	Enhancers	Fetal Brain Male	brain
28	chr3:497800-500000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
29	chr3:497800-500600	Weak transcription	Fetal Intestine Large	intestine
30	chr3:498000-500400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
31	chr3:498200-499200	Weak transcription	Fetal Brain Male	brain
32	chr3:498200-499400	Weak transcription	Brain Germinal Matrix	brain
33	chr3:498200-500400	Weak transcription	Fetal Intestine Small	intestine
34	chr3:499200-499800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr3:499200-500400	Enhancers	Fetal Brain Male	brain
36	chr3:499400-499600	Flanking Active TSS	Ovary	ovary
37	chr3:499400-499600	Enhancers	Psoas Muscle	Psoas
38	chr3:499400-499800	Enhancers	Brain Germinal Matrix	brain
39	chr3:499600-500200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr3:499600-500200	Active TSS	Ovary	ovary
41	chr3:499600-504400	Weak transcription	Psoas Muscle	Psoas
42	chr3:499800-500000	Enhancers	Brain Hippocampus Middle	brain
43	chr3:499800-500000	Enhancers	Fetal Brain Female	brain
44	chr3:499800-500200	Enhancers	Cortex derived primary cultured neurospheres	brain
45	chr3:499800-500200	Enhancers	Brain Angular Gyrus	brain
46	chr3:499800-500200	Flanking Active TSS	Brain Germinal Matrix	brain
47	chr3:499800-500600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr3:499800-501800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr3:500000-501200	Active TSS	Brain Hippocampus Middle	brain
50	chr3:500000-501400	Flanking Active TSS	Fetal Brain Female	brain

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