Variant report

Variant	nsv482884
Chromosome Location	chr9:98530027-98691937
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2344)
CpG islands
(count:1221)
Chromatin interactive
region (count:191)
LncRNA
region (count:37)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2344 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:98615314-98615385	K562	blood:	n/a	n/a
2	ARID3A	chr9:98596697-98597409	K562	blood:	n/a	n/a
3	ARID3A	chr9:98569726-98569949	HepG2	liver:	n/a	n/a
4	ARID3A	chr9:98533630-98534090	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:98638723-98639221	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:98686091-98686500	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:98670150-98670415	HepG2	liver:	n/a	n/a
8	ARID3A	chr9:98535101-98535184	HepG2	liver:	n/a	n/a
9	ATF1	chr9:98596672-98597148	K562	blood:	n/a	n/a
10	ATF1	chr9:98638947-98639306	K562	blood:	n/a	n/a
11	ATF1	chr9:98637308-98638493	K562	blood:	n/a	n/a
12	ATF1	chr9:98577431-98577795	K562	blood:	n/a	n/a
13	ATF1	chr9:98614950-98615150	K562	blood:	n/a	n/a
14	ATF1	chr9:98642340-98642637	K562	blood:	n/a	n/a
15	ATF2	chr9:98637199-98638494	GM12878	blood:	n/a	n/a
16	ATF2	chr9:98637525-98638539	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr9:98532916-98533400	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF2	chr9:98637554-98638668	GM12878	blood:	n/a	n/a
19	ATF2	chr9:98584851-98585628	GM12878	blood:	n/a	n/a
20	ATF2	chr9:98584953-98585578	GM12878	blood:	n/a	n/a
21	ATF2	chr9:98614751-98615325	GM12878	blood:	n/a	n/a
22	ATF2	chr9:98637418-98638460	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr9:98614594-98615515	GM12878	blood:	n/a	n/a
24	ATF3	chr9:98637744-98638589	A549	lung:	n/a	n/a
25	ATF3	chr9:98637628-98638564	A549	lung:	n/a	n/a
26	ATF3	chr9:98531831-98532092	K562	blood:	n/a	n/a
27	ATF3	chr9:98577504-98577699	K562	blood:	n/a	n/a
28	BACH1	chr9:98637726-98638563	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr9:98533905-98534148	H1-hESC	embryonic stem cell:	n/a	n/a
30	BACH1	chr9:98533097-98533203	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr9:98532395-98532416	H1-hESC	embryonic stem cell:	n/a	n/a
32	BATF	chr9:98584742-98585578	GM12878	blood:	n/a	n/a
33	BATF	chr9:98614808-98615340	GM12878	blood:	n/a	n/a
34	BATF	chr9:98627533-98627743	GM12878	blood:	n/a	n/a
35	BATF	chr9:98614800-98615296	GM12878	blood:	n/a	n/a
36	BATF	chr9:98638169-98638509	GM12878	blood:	n/a	n/a
37	BATF	chr9:98584963-98585500	GM12878	blood:	n/a	n/a
38	BCL11A	chr9:98614870-98615170	GM12878	blood:	n/a	chr9:98615016-98615025
39	BCL11A	chr9:98614786-98615293	GM12878	blood:	n/a	chr9:98615016-98615025
40	BCL11A	chr9:98585004-98585381	GM12878	blood:	n/a	chr9:98585306-98585315 chr9:98585233-98585242
41	BCL11A	chr9:98584881-98585432	GM12878	blood:	n/a	chr9:98585306-98585315 chr9:98585233-98585242
42	BCL3	chr9:98584928-98585388	GM12878	blood:	n/a	chr9:98585306-98585315 chr9:98585233-98585242
43	BCL3	chr9:98584923-98585456	GM12878	blood:	n/a	chr9:98585306-98585315 chr9:98585233-98585242
44	BCL3	chr9:98637587-98638543	GM12878	blood:	n/a	chr9:98638264-98638273
45	BCL3	chr9:98637283-98638657	A549	lung:	n/a	chr9:98638264-98638273
46	BCL3	chr9:98614808-98615282	GM12878	blood:	n/a	chr9:98615016-98615025
47	BCL3	chr9:98614809-98615216	GM12878	blood:	n/a	chr9:98615016-98615025
48	BCL3	chr9:98637518-98638673	A549	lung:	n/a	chr9:98638264-98638273
49	BCLAF1	chr9:98584754-98585589	GM12878	blood:	n/a	chr9:98585306-98585315 chr9:98585233-98585242
50	BCLAF1	chr9:98614814-98615328	GM12878	blood:	n/a	chr9:98615016-98615025

(count:1221 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:98548141-98548191	AoSMC	blood vessel:	n/a
2	chr9:98548141-98548191	AoSMC	blood vessel:	n/a
3	chr9:98636898-98636948	AG09319	gingival:	n/a
4	chr9:98637794-98637844	NHDF-neo	bronchial:	n/a
5	chr9:98545297-98545347	SK-N-SH	brain:	n/a
6	chr9:98545297-98545347	K562	blood:	n/a
7	chr9:98637794-98637844	GM06990	blood:	n/a
8	chr9:98534327-98534377	HIPEpiC	eye:	n/a
9	chr9:98637332-98637382	Jurkat	blood:	n/a
10	chr9:98638211-98638261	NHBE	bronchial:	n/a
11	chr9:98636898-98636948	LNCaP	prostate:	n/a
12	chr9:98636898-98636948	PrEC	prostate:	n/a
13	chr9:98637794-98637844	PFSK-1	brain:	n/a
14	chr9:98550966-98551016	HCPEpiC	choroid plexus:	n/a
15	chr9:98639872-98639922	SK-N-MC	brain:	n/a
16	chr9:98534327-98534377	HPAEpiC	pulmonary alveolar:	n/a
17	chr9:98550966-98551016	HIPEpiC	eye:	n/a
18	chr9:98537451-98537501	HRCEpiC	kidney:	n/a
19	chr9:98637884-98637934	SK-N-SH_RA	brain:	n/a
20	chr9:98544579-98544629	SK-N-SH_RA	brain:	n/a
21	chr9:98636898-98636948	AG09309	skin:	n/a
22	chr9:98637884-98637934	GM12878	blood:	n/a
23	chr9:98638211-98638261	MCF-7	breast:	n/a
24	chr9:98637454-98637504	PANC-1	pancreas:	n/a
25	chr9:98619666-98619716	NHBE	bronchial:	n/a
26	chr9:98546838-98546888	GM12892	blood:	n/a
27	chr9:98534327-98534377	HCF	heart:	n/a
28	chr9:98537451-98537501	ovcar-3	ovarian:	n/a
29	chr9:98585586-98585636	IMR90	lung:	fetal
30	chr9:98637454-98637504	GM12878	blood:	n/a
31	chr9:98544579-98544629	HPAEpiC	pulmonary alveolar:	n/a
32	chr9:98638211-98638261	ovcar-3	ovarian:	n/a
33	chr9:98638211-98638261	ECC-1	luminal epithelium:	n/a
34	chr9:98548141-98548191	MCF-7	breast:	n/a
35	chr9:98585586-98585636	NHBE	bronchial:	n/a
36	chr9:98637332-98637382	HMEC	breast:	n/a
37	chr9:98546838-98546888	Hela-S3	cervix:	n/a
38	chr9:98585586-98585636	K562	blood:	n/a
39	chr9:98637794-98637844	Hela-S3	cervix:	n/a
40	chr9:98637534-98637584	NHDF-neo	bronchial:	n/a
41	chr9:98637332-98637382	K562	blood:	n/a
42	chr9:98637332-98637382	SKMC	muscle:	n/a
43	chr9:98546838-98546888	HCPEpiC	choroid plexus:	n/a
44	chr9:98534327-98534377	LNCaP	prostate:	n/a
45	chr9:98548141-98548191	NH-A	brain:	n/a
46	chr9:98637454-98637504	BJ	skin:	n/a
47	chr9:98546936-98546986	RPTEC	kidney:	n/a
48	chr9:98534327-98534377	HAEpiC	amniotic membrane:	n/a
49	chr9:98534327-98534377	HepG2	liver:	n/a
50	chr9:98534327-98534377	GM12878	blood:	n/a

(count:191 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr9:98602627..98604199-chr9:98606124..98609102,2	K562	blood:
2	chr9:98636399..98639007-chr9:98649744..98652920,3	MCF-7	breast:
3	chr1:155657851..155658412-chr9:98637639..98638211,2	Hela-S3	cervix:
4	chr9:98569719..98571881-chr9:98585000..98587559,2	MCF-7	breast:
5	chr9:98571797..98574683-chr9:98583300..98586661,3	MCF-7	breast:
6	chr9:98636561..98638222-chr9:98688892..98691285,2	K562	blood:
7	chr3:143689788..143691376-chr9:98631114..98634044,2	MCF-7	breast:
8	chr9:98078160..98080305-chr9:98637483..98639375,2	MCF-7	breast:
9	chr9:98636333..98639771-chr9:98650158..98652405,3	MCF-7	breast:
10	chr20:60877800..60878543-chr9:98637869..98638479,2	Hela-S3	cervix:
11	chr9:98566028..98568952-chr9:98582785..98584307,2	MCF-7	breast:
12	chr9:98638841..98641088-chr9:98696754..98699064,2	K562	blood:
13	chr9:98666764..98669288-chr9:98669709..98671840,2	MCF-7	breast:
14	chr9:98583856..98586047-chr9:98617880..98619976,2	MCF-7	breast:
15	chr9:98268741..98271457-chr9:98649620..98651244,2	MCF-7	breast:
16	chr9:98618433..98621075-chr9:98635041..98638347,3	K562	blood:
17	chr9:98582540..98585042-chr9:98586577..98588192,2	MCF-7	breast:
18	chr9:98681098..98682813-chr9:98750330..98752671,2	K562	blood:
19	chr9:98276862..98280186-chr9:98636651..98639407,3	K562	blood:
20	chr9:98649131..98651473-chr9:98655917..98657431,2	K562	blood:
21	chr9:98640806..98643055-chr9:98646394..98647992,2	K562	blood:
22	chr6:26056066..26056962-chr9:98637905..98638564,2	Hela-S3	cervix:
23	chr9:98576423..98578313-chr9:98583202..98584976,2	K562	blood:
24	chr9:98591198..98593705-chr9:98595465..98597908,2	K562	blood:
25	chr9:98636168..98638789-chr9:98670448..98673046,3	MCF-7	breast:
26	chr9:98592959..98594768-chr9:98635758..98637895,2	MCF-7	breast:
27	chr9:98599925..98602235-chr9:98637374..98639294,2	MCF-7	breast:
28	chr9:98594615..98596489-chr9:98611453..98613393,2	K562	blood:
29	chr9:98531848..98533634-chr9:98635544..98637181,2	MCF-7	breast:
30	chr9:98277796..98280674-chr9:98636940..98639822,3	K562	blood:
31	chr9:98637024..98638791-chr9:98682127..98684213,2	MCF-7	breast:
32	chr9:98187335..98191305-chr9:98637767..98639481,3	MCF-7	breast:
33	chr9:98611430..98613498-chr9:98617563..98619978,2	MCF-7	breast:
34	chr9:98530888..98533284-chr9:98539147..98541445,2	K562	blood:
35	chr9:98640806..98643055-chr9:98646394..98647992,2	K562	blood:
36	chr9:98571684..98573454-chr9:98577064..98579753,2	MCF-7	breast:
37	chr9:98600432..98602813-chr9:98612011..98614211,4	MCF-7	breast:
38	chr7:30518092..30518790-chr9:98637529..98638155,2	MCF-7	breast:
39	chr9:98563811..98565847-chr9:98577723..98580063,2	MCF-7	breast:
40	chr9:98540410..98542743-chr9:98568688..98571195,2	MCF-7	breast:
41	chr9:98666802..98669304-chr9:98670282..98671938,2	K562	blood:
42	chr9:98603000..98605899-chr9:98606221..98608449,2	MCF-7	breast:
43	chr9:98627050..98630496-chr9:98631101..98634293,4	K562	blood:
44	chr9:98583596..98587083-chr9:98587311..98591492,4	MCF-7	breast:
45	chr9:98270649..98275167-chr9:98636318..98639773,5	MCF-7	breast:
46	chr9:98686572..98689249-chr9:98695203..98698057,2	MCF-7	breast:
47	chr9:98603406..98605287-chr9:98635998..98638339,2	MCF-7	breast:
48	chr9:98657048..98659286-chr9:98663988..98665978,2	MCF-7	breast:
49	chr9:98636376..98639087-chr9:98667887..98670748,3	MCF-7	breast:
50	chr9:98594615..98596489-chr9:98611453..98613393,2	K562	blood:

(count:37 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PTCH1-3	chr9:98638147-98638259	ENSG00000175611
2	lnc-C9orf102-7	chr9:98575836-98576850	NONHSAT133395
3	lnc-PTCH1-7	chr9:98628393-98628625	NONHSAT133399
4	lnc-PTCH1-3	chr9:98637262-98637552	ENSG00000175611
5	lnc-PTCH1-3	chr9:98638147-98638259	NONHSAT133392
6	lnc-PTCH1-3	chr9:98636791-98636830	ENSG00000175611
7	lnc-PTCH1-3	chr9:98636791-98636904	NONHSAT133402
8	lnc-PTCH1-3	chr9:98637262-98637352	ENSG00000175611
9	lnc-PTCH1-3	chr9:98636791-98636904	ENSG00000175611
10	lnc-PTCH1-3	chr9:98568370-98576204	NONHSAT133392
11	lnc-PTCH1-3	chr9:98637262-98637762	ENSG00000175611.7
12	lnc-PTCH1-3	chr9:98612509-98612574	NONHSAT133392
13	lnc-C9orf102-3	chr9:98537058-98537376	XLOC_007475
14	lnc-PTCH1-3	chr9:98632566-98632723	ENSG00000175611
15	lnc-PTCH1-3	chr9:98632565-98632723	ENSG00000175611
16	lnc-PTCH1-3	chr9:98612509-98612574	ENSG00000175611
17	lnc-PTCH1-3	chr9:98637262-98638394	NONHSAT133403
18	lnc-PTCH1-3	chr9:98575575-98576204	ENSG00000175611
19	lnc-PTCH1-3	chr9:98602882-98605032	ENSG00000175611
20	lnc-PTCH1-3	chr9:98568376-98570719	NONHSAT133393
21	lnc-PTCH1-3	chr9:98637262-98637869	ENSG00000175611
22	lnc-PTCH1-3	chr9:98632676-98632723	NONHSAT133403
23	lnc-PTCH1-3	chr9:98637262-98637465	NONHSAT133390
24	lnc-PTCH1-3	chr9:98612509-98612574	ENSG00000175611
25	lnc-PTCH1-8	chr9:98630174-98630835	NONHSAT133400
26	lnc-PTCH1-3	chr9:98569493-98569998	NONHSAT133394
27	lnc-PTCH1-3	chr9:98632122-98632723	ENSG00000175611
28	lnc-PTCH1-3	chr9:98632566-98632723	NONHSAT133402
29	lnc-PTCH1-3	chr9:98536170-98536299	ENSG00000175611.7
30	lnc-PTCH1-3	chr9:98536170-98536299	ENSG00000175611
31	lnc-PTCH1-3	chr9:98637279-98637436	NONHSAT133404
32	lnc-PTCH1-3	chr9:98637508-98638366	NONHSAT133404
33	lnc-PTCH1-3	chr9:98576126-98576205	NONHSAT133394
34	lnc-PTCH1-3	chr9:98637262-98638258	ENSG00000175611
35	lnc-PTCH1-3	chr9:98637262-98638259	NONHSAT133402
36	lnc-PTCH1-3	chr9:98637262-98637762	ENSG00000175611
37	lnc-C9orf102-3	chr9:98532335-98532391	XLOC_007475

No data

Variant related genes	Relation type
ENSG00000237631	TF binding region
ERCC6L2	TF binding region
RNA5SP289	TF binding region
LINC00476	TF binding region
RNU2-46P	TF binding region
ENSG00000268926	TF binding region
ENSG00000237631	CpG island
ERCC6L2	CpG island
RNA5SP289	CpG island
LINC00476	CpG island
RNU2-46P	CpG island
ENSG00000268926	CpG island
ENSG00000237631	chromatin interactions
ENSG00000142864	chromatin interactions
ENSG00000167182	chromatin interactions
ENSG00000185920	chromatin interactions
ENSG00000187837	chromatin interactions
ENSG00000181744	chromatin interactions
ENSG00000077458	chromatin interactions
ENSG00000259332	chromatin interactions
ENSG00000138594	chromatin interactions
ENSG00000271155	chromatin interactions
ENSG00000163633	chromatin interactions
ENSG00000130706	chromatin interactions
ENSG00000163374	chromatin interactions
ENSG00000175611	chromatin interactions
ENSG00000106100	chromatin interactions
ENSG00000268926	chromatin interactions
ENSG00000197208	chromatin interactions
ENSG00000237857	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000252847	chromatin interactions
ENSG00000182150	chromatin interactions
ENSG00000166037	chromatin interactions
ENSG00000158169	chromatin interactions
ENSG00000172493	chromatin interactions
ENSG00000225194	chromatin interactions
ENSG00000050426	chromatin interactions
ENSG00000137203	chromatin interactions
ENSG00000005022	chromatin interactions
ENSG00000199202	chromatin interactions
TMCC1	miRNA target sites
STAT3	miRNA target sites
SEPT6	miRNA target sites
CSDE1	miRNA target sites
LMO7	miRNA target sites
CASP9	miRNA target sites
ZNF567	miRNA target sites
CDC42EP4	miRNA target sites
ZNF828	miRNA target sites
MAPK9	miRNA target sites
MAX	miRNA target sites
EIF3H	miRNA target sites
SLC6A9	miRNA target sites
KLF4	miRNA target sites

Extended variants
information (count: 5819 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:5819 , 50 per page) page: 1 2 3 4 5 6 7 ... 117

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs111567447	chr9:98530170-98530171	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs561688073	chr9:98530186-98530187	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs562334107	chr9:98530203-98530204	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs114990914	chr9:98530233-98530234	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs7860168	chr9:98530249-98530250	Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs180830891	chr9:98530255-98530256	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs531048104	chr9:98530282-98530283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs118127829	chr9:98530297-98530298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs75124227	chr9:98530298-98530299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs75824075	chr9:98530308-98530309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs527290883	chr9:98530329-98530330	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs138827325	chr9:98530331-98530332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs568765055	chr9:98530345-98530346	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs535747841	chr9:98530373-98530374	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs557546917	chr9:98530374-98530375	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs35351737	chr9:98530429-98530430	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs552010545	chr9:98530454-98530455	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs149107634	chr9:98530475-98530476	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs372568243	chr9:98530485-98530486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs570431504	chr9:98530517-98530518	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs539150446	chr9:98530518-98530519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs537625397	chr9:98530524-98530525	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs557476074	chr9:98530573-98530574	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs150468662	chr9:98530604-98530605	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs569650928	chr9:98530605-98530606	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs143192821	chr9:98530666-98530667	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs539874676	chr9:98530758-98530759	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs554919947	chr9:98530776-98530777	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs573899382	chr9:98530800-98530801	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs75317651	chr9:98530823-98530824	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs562708793	chr9:98530872-98530873	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs148238434	chr9:98530890-98530891	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs141258583	chr9:98530898-98530899	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs73528850	chr9:98530900-98530901	Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs528577820	chr9:98530962-98530963	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs7045260	chr9:98530983-98530984	Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs561900646	chr9:98530994-98530995	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs75181986	chr9:98530995-98530996	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs111337064	chr9:98531003-98531004	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs550947061	chr9:98531059-98531060	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs569531474	chr9:98531068-98531069	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs187657374	chr9:98531080-98531081	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs539683652	chr9:98531082-98531083	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs534998527	chr9:98531088-98531089	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs150733916	chr9:98531089-98531090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs535568986	chr9:98531107-98531108	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs566258067	chr9:98531108-98531109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs533614550	chr9:98531121-98531122	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs555354826	chr9:98531137-98531138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs373120429	chr9:98531202-98531203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Biliary cancer	19435499	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Breast cancer	17133270	CNVD
Basal cell nevus syndrome	21572526	CNVD
Mental retardation	19951919	CNVD
Retinoblastoma	22278416	CNVD
9q22.3 microdeletion syndrome	22283845	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
overgrowth syndrome	16570072	CNVD
Effusion lymphoma	18079361	CNVD
Pancreatic cancer	17952125	CNVD
Neurodevelopmental disorder	22521361	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:3475 , 50 per page) page: 1 2 3 4 5 6 7 ... 70

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:98526200-98530200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
2	chr9:98527000-98532200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr9:98527600-98531800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr9:98527600-98532600	Weak transcription	Ovary	ovary
5	chr9:98527600-98533000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr9:98527600-98533800	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr9:98527800-98532400	Weak transcription	Fetal Stomach	stomach
8	chr9:98528000-98530600	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr9:98528000-98531400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr9:98528000-98532000	Weak transcription	HepG2	liver
11	chr9:98528000-98533200	Weak transcription	Fetal Intestine Large	intestine
12	chr9:98528000-98533600	Weak transcription	Rectal Smooth Muscle	rectum
13	chr9:98528200-98532400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr9:98529200-98532400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr9:98529600-98531800	Weak transcription	Fetal Lung	lung
16	chr9:98529600-98532200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr9:98529600-98532400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr9:98529600-98532400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
19	chr9:98529800-98532000	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr9:98529800-98533800	Weak transcription	Brain Anterior Caudate	brain
21	chr9:98529800-98534000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr9:98530200-98533000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
23	chr9:98530600-98530800	Enhancers	Rectal Mucosa Donor 29	rectum
24	chr9:98531400-98533000	Weak transcription	Colonic Mucosa	Colon
25	chr9:98531600-98534000	Enhancers	Placenta	Placenta
26	chr9:98531800-98532000	Enhancers	Stomach Smooth Muscle	stomach
27	chr9:98531800-98532600	Enhancers	Fetal Lung	lung
28	chr9:98531800-98532800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
29	chr9:98531800-98535600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr9:98532000-98532200	Enhancers	Lung	lung
31	chr9:98532000-98532600	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
32	chr9:98532000-98532600	Weak transcription	Stomach Smooth Muscle	stomach
33	chr9:98532000-98532800	Enhancers	HUES6 Cell Line	embryonic stem cell
34	chr9:98532000-98532800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
35	chr9:98532000-98533400	Enhancers	HepG2	liver
36	chr9:98532200-98533000	Weak transcription	Lung	lung
37	chr9:98532200-98534600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr9:98532200-98535400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr9:98532200-98535800	Enhancers	Fetal Intestine Small	intestine
40	chr9:98532400-98532600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr9:98532400-98532800	Enhancers	ES-I3 Cell Line	embryonic stem cell
42	chr9:98532400-98532800	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
43	chr9:98532400-98532800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
44	chr9:98532400-98533000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
45	chr9:98532400-98533000	Enhancers	Fetal Stomach	stomach
46	chr9:98532400-98533200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
47	chr9:98532400-98533200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr9:98532400-98533200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
49	chr9:98532400-98533200	Enhancers	Gastric	stomach
50	chr9:98532400-98533800	Enhancers	Fetal Kidney	kidney

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