Variant report

Variant nsv4842
Chromosome Location chr5:57653257-57694850
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:57649400-57655000 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr5:57650200-57655600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr5:57650200-57655800 Weak transcription H1 Cell Line embryonic stem cell
4 chr5:57650400-57655800 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr5:57650400-57656000 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr5:57651800-57656400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr5:57653200-57655200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:57653600-57655000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
9 chr5:57655600-57656400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
10 chr5:57655800-57656800 Enhancers iPS-18 Cell Line embryonic stem cell
11 chr5:57655800-57657200 Enhancers H1 Cell Line embryonic stem cell
12 chr5:57656000-57656800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr5:57656000-57657400 Enhancers iPS-20b Cell Line embryonic stem cell
14 chr5:57656400-57657000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr5:57656400-57657000 Enhancers HUES6 Cell Line embryonic stem cell
16 chr5:57656400-57657000 Enhancers Fetal Heart heart
17 chr5:57656600-57657000 Enhancers Left Ventricle heart
18 chr5:57656600-57657200 Enhancers HUES48 Cell Line embryonic stem cell
19 chr5:57656600-57657400 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr5:57656800-57657200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
21 chr5:57657000-57657400 Enhancers HUES64 Cell Line embryonic stem cell
22 chr5:57657000-57661600 Weak transcription Fetal Heart heart
23 chr5:57657200-57657400 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr5:57658400-57658600 Weak transcription Adipose Nuclei Adipose
25 chr5:57658600-57658800 Enhancers Adipose Nuclei Adipose
26 chr5:57658800-57662400 Weak transcription Adipose Nuclei Adipose
27 chr5:57661600-57664000 Enhancers Fetal Heart heart
28 chr5:57661800-57662600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr5:57661800-57662600 Enhancers Skeletal Muscle Female skeletal muscle
30 chr5:57661800-57663000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:57662400-57662800 Enhancers Adipose Nuclei Adipose
32 chr5:57662400-57663000 Enhancers HSMMtube muscle
33 chr5:57664000-57664400 Weak transcription Fetal Heart heart
34 chr5:57664400-57666400 Enhancers Fetal Heart heart
35 chr5:57665600-57666400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr5:57665600-57666400 Enhancers Right Ventricle heart
37 chr5:57665600-57666600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr5:57665600-57667200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr5:57665800-57666400 Enhancers Brain Germinal Matrix brain
40 chr5:57666000-57666800 Enhancers iPS-20b Cell Line embryonic stem cell
41 chr5:57666000-57667000 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr5:57666000-57667200 Enhancers Fetal Brain Male brain
43 chr5:57666200-57666400 Enhancers ES-WA7 Cell Line embryonic stem cell
44 chr5:57666400-57666800 Flanking Active TSS ES-WA7 Cell Line embryonic stem cell
45 chr5:57666400-57667000 Enhancers iPS-15b Cell Line embryonic stem cell
46 chr5:57666400-57667000 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr5:57666400-57667200 Active TSS Brain Germinal Matrix brain
48 chr5:57666400-57667200 Enhancers Fetal Brain Female brain
49 chr5:57666600-57667000 Enhancers Pancreatic Islets Pancreatic Islet
50 chr5:57673200-57676000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell

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