Variant report
Variant | nsv491784 |
---|---|
Chromosome Location | chr1:79146141-79853482 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3430)
- CpG islands (count:1408)
- Chromatin interactive region (count:36)
- LncRNA region (count:29)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr1:79305459-79305734 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr1:79305438-79305769 | HepG2 | liver: | n/a | n/a |
3 | ATF1 | chr1:79259668-79259884 | K562 | blood: | n/a | n/a |
4 | ATF2 | chr1:79507719-79508191 | GM12878 | blood: | n/a | n/a |
5 | ATF2 | chr1:79506114-79506881 | GM12878 | blood: | n/a | n/a |
6 | ATF2 | chr1:79507696-79508185 | GM12878 | blood: | n/a | n/a |
7 | ATF2 | chr1:79658867-79659458 | H1-hESC | embryonic stem cell: | n/a | n/a |
8 | ATF2 | chr1:79505821-79506890 | GM12878 | blood: | n/a | n/a |
9 | ATF2 | chr1:79350690-79350993 | H1-hESC | embryonic stem cell: | n/a | n/a |
10 | ATF2 | chr1:79728345-79728782 | H1-hESC | embryonic stem cell: | n/a | n/a |
11 | BACH1 | chr1:79507950-79508076 | K562 | blood: | n/a | n/a |
12 | BACH1 | chr1:79508075-79508122 | H1-hESC | embryonic stem cell: | n/a | n/a |
13 | BACH1 | chr1:79658878-79659483 | H1-hESC | embryonic stem cell: | n/a | chr1:79659052-79659066 |
14 | BACH1 | chr1:79472315-79472519 | H1-hESC | embryonic stem cell: | n/a | n/a |
15 | BACH1 | chr1:79545497-79545905 | H1-hESC | embryonic stem cell: | n/a | chr1:79545669-79545683 |
16 | BATF | chr1:79186923-79187193 | GM12878 | blood: | n/a | chr1:79187031-79187042 |
17 | BATF | chr1:79507758-79508057 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr1:79320756-79321223 | GM12878 | blood: | n/a | chr1:79320825-79320834 |
19 | BATF | chr1:79507747-79508138 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr1:79506304-79506770 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr1:79658862-79659246 | GM12878 | blood: | n/a | chr1:79659055-79659066 |
22 | BATF | chr1:79186827-79187216 | GM12878 | blood: | n/a | chr1:79187031-79187042 |
23 | BATF | chr1:79658879-79659230 | GM12878 | blood: | n/a | chr1:79659055-79659066 |
24 | BATF | chr1:79506383-79506726 | GM12878 | blood: | n/a | n/a |
25 | BCL11A | chr1:79659126-79659356 | H1-hESC | embryonic stem cell: | n/a | n/a |
26 | BCL11A | chr1:79506346-79506753 | GM12878 | blood: | n/a | n/a |
27 | BCL11A | chr1:79728386-79728591 | H1-hESC | embryonic stem cell: | n/a | n/a |
28 | BCL11A | chr1:79300086-79300356 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr1:79603898-79604245 | H1-hESC | embryonic stem cell: | n/a | n/a |
30 | BCL11A | chr1:79507862-79508010 | GM12878 | blood: | n/a | n/a |
31 | BCL11A | chr1:79604022-79604167 | H1-hESC | embryonic stem cell: | n/a | n/a |
32 | BCL11A | chr1:79262911-79263285 | H1-hESC | embryonic stem cell: | n/a | n/a |
33 | BCL11A | chr1:79507836-79508150 | GM12878 | blood: | n/a | n/a |
34 | BCL3 | chr1:79158093-79158327 | GM12878 | blood: | n/a | n/a |
35 | BCL3 | chr1:79507766-79508061 | GM12878 | blood: | n/a | n/a |
36 | BCL3 | chr1:79506306-79506801 | GM12878 | blood: | n/a | n/a |
37 | BCLAF1 | chr1:79507869-79508207 | GM12878 | blood: | n/a | n/a |
38 | BCLAF1 | chr1:79506260-79506789 | GM12878 | blood: | n/a | n/a |
39 | BHLHE40 | chr1:79655568-79655570 | GM12878 | blood: | n/a | n/a |
40 | BHLHE40 | chr1:79405513-79405527 | GM12878 | blood: | n/a | n/a |
41 | BHLHE40 | chr1:79297522-79297765 | GM12878 | blood: | n/a | n/a |
42 | BHLHE40 | chr1:79158440-79158519 | HepG2 | liver: | n/a | n/a |
43 | BHLHE40 | chr1:79320988-79321254 | GM12878 | blood: | n/a | n/a |
44 | BRCA1 | chr1:79617796-79617801 | Hela-S3 | cervix: | n/a | n/a |
45 | BRCA1 | chr1:79459804-79459831 | Hela-S3 | cervix: | n/a | n/a |
46 | BRCA1 | chr1:79415111-79415262 | Hela-S3 | cervix: | n/a | n/a |
47 | BRCA1 | chr1:79509475-79509505 | Hela-S3 | cervix: | n/a | n/a |
48 | BRCA1 | chr1:79262865-79262987 | H1-hESC | embryonic stem cell: | n/a | n/a |
49 | CBX3 | chr1:79297275-79297897 | HCT-116 | colon: | n/a | n/a |
50 | CBX3 | chr1:79658842-79659475 | HCT-116 | colon: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:79594960-79595010 | AG09319 | gingival: | n/a |
2 | chr1:79350918-79350968 | LNCaP | prostate: | n/a |
3 | chr1:79726633-79726683 | AoSMC | blood vessel: | n/a |
4 | chr1:79472408-79472458 | PFSK-1 | brain: | n/a |
5 | chr1:79726633-79726683 | HepG2 | liver: | n/a |
6 | chr1:79594960-79595010 | AG09319 | gingival: | n/a |
7 | chr1:79350918-79350968 | LNCaP | prostate: | n/a |
8 | chr1:79726633-79726683 | AoSMC | blood vessel: | n/a |
9 | chr1:79472408-79472458 | PFSK-1 | brain: | n/a |
10 | chr1:79726633-79726683 | HepG2 | liver: | n/a |
11 | chr1:79830414-79830464 | HL-60 | blood: | n/a |
12 | chr1:79472532-79472582 | NT2-D1 | testis: | n/a |
13 | chr1:79726633-79726683 | IMR90 | lung: | fetal |
14 | chr1:79472408-79472458 | ECC-1 | luminal epithelium: | n/a |
15 | chr1:79726633-79726683 | SAEC | small airway: | n/a |
16 | chr1:79726633-79726683 | MCF-7 | breast: | n/a |
17 | chr1:79801791-79801841 | Hepatocyte | liver: | n/a |
18 | chr1:79307043-79307093 | BJ | skin: | n/a |
19 | chr1:79627622-79627672 | SK-N-SH_RA | brain: | n/a |
20 | chr1:79472361-79472411 | HCT-116 | colon: | n/a |
21 | chr1:79473783-79473833 | SAEC | small airway: | n/a |
22 | chr1:79726633-79726683 | K562 | blood: | n/a |
23 | chr1:79472643-79472693 | GM12891 | blood: | n/a |
24 | chr1:79471984-79472034 | GM06990 | blood: | n/a |
25 | chr1:79472643-79472693 | NB4 | blood: | n/a |
26 | chr1:79472532-79472582 | Hepatocyte | liver: | n/a |
27 | chr1:79728608-79728658 | AG04449 | skin: | fetal |
28 | chr1:79594960-79595010 | H1-hESC | embryonic stem cell: | embryo |
29 | chr1:79472532-79472582 | HCT-116 | colon: | n/a |
30 | chr1:79472282-79472332 | GM19239 | blood: | n/a |
31 | chr1:79658903-79658953 | K562 | blood: | n/a |
32 | chr1:79472643-79472693 | T-47D | breast: | n/a |
33 | chr1:79474718-79474768 | HIPEpiC | eye: | n/a |
34 | chr1:79472452-79472502 | HCPEpiC | choroid plexus: | n/a |
35 | chr1:79627622-79627672 | PrEC | prostate: | n/a |
36 | chr1:79658903-79658953 | Jurkat | blood: | n/a |
37 | chr1:79307043-79307093 | HepG2 | liver: | n/a |
38 | chr1:79728608-79728658 | Hela-S3 | cervix: | n/a |
39 | chr1:79830414-79830464 | HPAEpiC | pulmonary alveolar: | n/a |
40 | chr1:79658903-79658953 | HAEpiC | amniotic membrane: | n/a |
41 | chr1:79801791-79801841 | A549 | lung: | n/a |
42 | chr1:79472643-79472693 | NHBE | bronchial: | n/a |
43 | chr1:79350918-79350968 | AG09319 | gingival: | n/a |
44 | chr1:79350918-79350968 | AoSMC | blood vessel: | n/a |
45 | chr1:79472558-79472608 | GM06990 | blood: | n/a |
46 | chr1:79728608-79728658 | AG10803 | skin: | n/a |
47 | chr1:79726633-79726683 | SK-N-MC | brain: | n/a |
48 | chr1:79471984-79472034 | A549 | lung: | n/a |
49 | chr1:79472452-79472502 | U87 | brain: | n/a |
50 | chr1:79307043-79307093 | HRPEpiC | eye: | n/a |
(count:36 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:79484446..79486654-chr1:79486860..79488839,2 | MCF-7 | breast: | |
2 | chr1:79717844..79719500-chr13:74206627..74209123,2 | MCF-7 | breast: | |
3 | chr1:79304951..79305958-chr1:79662942..79663752,3 | MCF-7 | breast: | |
4 | chr1:79812849..79814988-chr1:79816549..79819262,2 | MCF-7 | breast: | |
5 | chr1:79299275..79301209-chr1:79305174..79307511,2 | K562 | blood: | |
6 | chr1:79536026..79538535-chr1:79539899..79541790,2 | K562 | blood: | |
7 | chr1:79702123..79704938-chr10:125479865..125482682,2 | MCF-7 | breast: | |
8 | chr1:79810637..79813588-chr1:79825621..79828347,3 | MCF-7 | breast: | |
9 | chr1:79744482..79747181-chr12:54772744..54775487,2 | MCF-7 | breast: | |
10 | chr1:79154179..79155005-chr1:79663219..79663974,2 | MCF-7 | breast: | |
11 | chr1:79826260..79828689-chr6:111008268..111010656,2 | MCF-7 | breast: | |
12 | chr1:79281703..79284146-chr1:79308021..79310225,2 | K562 | blood: | |
13 | chr1:79728080..79730865-chr1:79731789..79734341,2 | K562 | blood: | |
14 | chr1:79410821..79413576-chr1:79414533..79416679,2 | K562 | blood: | |
15 | chr1:79725343..79726033-chr1:79818640..79819391,2 | MCF-7 | breast: | |
16 | chr1:79411840..79414575-chr1:79858123..79860401,2 | K562 | blood: | |
17 | chr1:79370114..79372345-chr1:79443530..79445892,2 | K562 | blood: | |
18 | chr1:79370114..79372345-chr1:79443530..79445892,2 | K562 | blood: | |
19 | chr1:79410821..79413576-chr1:79414533..79416679,2 | K562 | blood: | |
20 | chr1:79616451..79619205-chr1:79639296..79641396,2 | MCF-7 | breast: | |
21 | chr1:79356582..79358429-chr1:79361774..79364231,2 | MCF-7 | breast: | |
22 | chr1:79728080..79730865-chr1:79731789..79734341,2 | K562 | blood: | |
23 | chr1:79536026..79538535-chr1:79539899..79541790,2 | K562 | blood: | |
24 | chr1:79281703..79284146-chr1:79308021..79310225,2 | K562 | blood: | |
25 | chr1:79304951..79305958-chr1:79662942..79663752,3 | MCF-7 | breast: | |
26 | chr1:79266346..79267150-chr1:79858034..79858765,3 | MCF-7 | breast: | |
27 | chr1:79812849..79814988-chr1:79816549..79819262,2 | MCF-7 | breast: | |
28 | chr1:79154179..79155005-chr1:79663219..79663974,2 | MCF-7 | breast: | |
29 | chr1:79527063..79529337-chr1:79533334..79535055,2 | K562 | blood: | |
30 | chr1:79484446..79486654-chr1:79486860..79488839,2 | MCF-7 | breast: | |
31 | chr1:79356582..79358429-chr1:79361774..79364231,2 | MCF-7 | breast: | |
32 | chr1:79299275..79301209-chr1:79305174..79307511,2 | K562 | blood: | |
33 | chr1:79527063..79529337-chr1:79533334..79535055,2 | K562 | blood: | |
34 | chr1:79725343..79726033-chr1:79818640..79819391,2 | MCF-7 | breast: | |
35 | chr1:79810637..79813588-chr1:79825621..79828347,3 | MCF-7 | breast: | |
36 | chr1:79616451..79619205-chr1:79639296..79641396,2 | MCF-7 | breast: |
(count:29 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-IFI44-2 | chr1:79735991-79736371 | NONHSAT004088 |
2 | lnc-IFI44-7 | chr1:79562042-79562232 | NONHSAT004086 |
3 | lnc-IFI44-2 | chr1:79775231-79775405 | XLOC_000266 |
4 | lnc-IFI44-2 | chr1:79775371-79775405 | XLOC_000266 |
5 | lnc-IFI44-1 | chr1:79790385-79790548 | ENSG00000235011.2 |
6 | lnc-ELTD1-4 | chr1:79787090-79787278 | XLOC_000880 |
7 | lnc-IFI44-2 | chr1:79775231-79775346 | XLOC_000266 |
8 | lnc-IFI44-2 | chr1:79775230-79775405 | NONHSAT004088 |
9 | lnc-ELTD1-5 | chr1:79789342-79789745 | XLOC_000881 |
10 | lnc-IFI44-2 | chr1:79842763-79842816 | XLOC_000266 |
11 | lnc-ELTD1-5 | chr1:79789429-79789745 | NONHSAT004093 |
12 | lnc-IFI44-1 | chr1:79789454-79789644 | XLOC_000267 |
13 | lnc-ELTD1-5 | chr1:79790271-79790416 | NONHSAT004093 |
14 | lnc-ELTD1-3 | chr1:79778966-79779074 | XLOC_000879 |
15 | lnc-ELTD1-2 | chr1:79490858-79491009 | XLOC_000877 |
16 | lnc-IFI44-1 | chr1:79789454-79789644 | ENSG00000235011.2 |
17 | lnc-ELTD1-1 | chr1:79351642-79351681 | NONHSAT004083 |
18 | lnc-ELTD1-4 | chr1:79786813-79786877 | XLOC_000880 |
19 | lnc-ELTD1-1 | chr1:79346569-79346750 | NONHSAT004083 |
20 | lnc-IFI44-7 | chr1:79562972-79563122 | NONHSAT004086 |
21 | lnc-ELTD1-2 | chr1:79493775-79493876 | XLOC_000877 |
22 | lnc-IFI44-1 | chr1:79790384-79790534 | XLOC_000267 |
23 | lnc-ELTD1-5 | chr1:79790271-79790552 | XLOC_000881 |
24 | lnc-ELTD1-5 | chr1:79788603-79788631 | NONHSAT004093 |
25 | lnc-ELTD1-3 | chr1:79775130-79775346 | XLOC_000879 |
26 | lnc-IFI44-1 | chr1:79790270-79790552 | NONHSAT004094 |
27 | lnc-IFI44-2 | chr1:79735992-79736371 | XLOC_000266 |
28 | lnc-IFI44-1 | chr1:79789341-79789745 | NONHSAT004094 |
29 | lnc-IFI44-2 | chr1:79736086-79736371 | XLOC_000266 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000266388 | TF binding region |
ENSG00000235011 | TF binding region |
ENSG00000221683 | TF binding region |
ENSG00000235400 | TF binding region |
ELTD1 | TF binding region |
PSAT1P3 | TF binding region |
ENSG00000266388 | CpG island |
ENSG00000235011 | CpG island |
ENSG00000221683 | CpG island |
ENSG00000235400 | CpG island |
ELTD1 | CpG island |
PSAT1P3 | CpG island |
ENSG00000161642 | chromatin interactions |
DYRK2 | miRNA target sites |
RELA | miRNA target sites |
BCL11A | miRNA target sites |
IGSF1 | miRNA target sites |
C9orf5 | miRNA target sites |
TCF7L2 | miRNA target sites |
ZNF652 | miRNA target sites |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs187577012 | chr1:79146151-79146152 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs75712493 | chr1:79146184-79146185 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs375337107 | chr1:79146224-79146225 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs566810406 | chr1:79146233-79146234 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs547576275 | chr1:79146351-79146352 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs572568118 | chr1:79146416-79146417 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs142955309 | chr1:79146417-79146418 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs1547181 | chr1:79146434-79146435 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
9 | rs578120930 | chr1:79146457-79146458 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs192791807 | chr1:79146481-79146482 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs563966961 | chr1:79146495-79146496 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs538664497 | chr1:79146513-79146514 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs549363020 | chr1:79146517-79146518 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs368392363 | chr1:79146552-79146553 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs528525075 | chr1:79146577-79146578 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs182914203 | chr1:79146578-79146579 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs151121298 | chr1:79146583-79146584 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs538787783 | chr1:79146593-79146594 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs113858080 | chr1:79146596-79146597 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs569103055 | chr1:79146613-79146614 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs77496307 | chr1:79146655-79146656 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs554476118 | chr1:79146689-79146690 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs377251475 | chr1:79146698-79146699 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs12755937 | chr1:79146699-79146700 | Weak transcription | n/a | n/a | Overlapped CNVs | mRNA abundance |
25 | rs146796321 | chr1:79146709-79146710 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs541168692 | chr1:79146718-79146719 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs113638719 | chr1:79146748-79146749 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs140603320 | chr1:79146774-79146775 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs375748174 | chr1:79146808-79146809 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs145738091 | chr1:79146840-79146841 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs146711362 | chr1:79146873-79146874 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs563745510 | chr1:79146878-79146879 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs111716197 | chr1:79146893-79146894 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs6695058 | chr1:79146909-79146910 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
35 | rs561616278 | chr1:79146921-79146922 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs528487310 | chr1:79146928-79146929 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs188157245 | chr1:79146961-79146962 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs565336170 | chr1:79146971-79146972 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs375968453 | chr1:79146984-79146985 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs556279864 | chr1:79147003-79147004 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs550713067 | chr1:79147032-79147033 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs191754425 | chr1:79147057-79147058 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs536067307 | chr1:79147058-79147059 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs199941617 | chr1:79147102-79147103 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs377593301 | chr1:79147130-79147131 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs548075071 | chr1:79147166-79147167 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs566469815 | chr1:79147189-79147190 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs370564081 | chr1:79147194-79147195 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs377396044 | chr1:79147195-79147196 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs374327936 | chr1:79147199-79147200 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Medulloblastoma | 21979893 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Wilms tumour | 21544195 | CNVD |
Coronary Disease | 20032323 | CNVD |
Prostate cancer | 21965145 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Stargardt''s disease | 17277736 | CNVD |
Neuroblastoma | 17897457 | CNVD |
Uveal melanoma | 21693616 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Neuroblastoma | 21484798 | CNVD |
Non-syndromic sensorineural hearing loss | 22290220 | CNVD |
Liposarcoma | 21253554 | CNVD |
Breast cancer | 21264507 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Cancer | 21499728 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
Papillary thyroid carcinoma | 21436994 | CNVD |
Neuroblastoma | 17535989 | CNVD |
Pheochromocytoma | 17535989 | CNVD |
Prostate cancer | 16705090 | CNVD |
Astrocytoma | 17934521 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Multiple myeloma | 17077331 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Breast cancer | 17603634 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
HIV/AIDS | 22032296 | CNVD |
Schizophrenia | 19415332 | CNVD |
Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Autism | 22495311 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Chordoma | 21602918 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
Melanoma | 18172304 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Melanoma | 17363583 | CNVD |
Cancer | 21129771 | CNVD |
Autosomal dominant nocturnal frontal lobe epilepsy | 18472482 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Non-small cell lung cancer | 20864512 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Thrombocytopenia-absent radius syndrome | 21933853 | CNVD |
Psychiatric disorder | 22848183 | CNVD |
Diffuse large b-cell lymphoma | 18287131 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Breast cancer | 20409316 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Breast cancer | 17393978 | CNVD |
Cervical cancer | 21062161 | CNVD |
Cancer | 21183584 | CNVD |
Breast cancer | 21785460 | CNVD |
Breast cancer | 21364760 | CNVD |
Rett syndrome | 21593744 | CNVD |
Prostate cancer | 16573809 | CNVD |
Breast cancer | 16608533 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Breast cancer | 17133270 | CNVD |
Type 2 diabetes | 21956041 | CNVD |
Uveal melanoma | 20484589 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Intellectual disability | 22102821 | CNVD |
Cancer | 20164919 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Poland''s syndrome | 22110015 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Glioblastoma multiforme | 21922591 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Cancer | 22429812 | CNVD |
Effusion lymphoma | 18079361 | CNVD |
Non-muscle invasive bladder neoplasm | 19445696 | CNVD |
Malignant mesothelioma | 18160781 | CNVD |
Pleural malignant mesothelioma | 18160781 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:79117600-79153000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
2 | chr1:79126600-79148000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
3 | chr1:79138600-79148200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
4 | chr1:79143600-79151200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
5 | chr1:79144200-79148000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
6 | chr1:79144200-79148000 | Weak transcription | Osteobl | bone |
7 | chr1:79144400-79148200 | Weak transcription | HSMM | muscle |
8 | chr1:79148000-79148400 | Enhancers | Osteobl | bone |
9 | chr1:79148000-79148600 | Enhancers | NHDF-Ad | bronchial |
10 | chr1:79148000-79149000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
11 | chr1:79148000-79149000 | Enhancers | Muscle Satellite Cultured Cells | -- |
12 | chr1:79148000-79149200 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
13 | chr1:79148200-79148400 | Enhancers | HMEC | breast |
14 | chr1:79148200-79148600 | Enhancers | HSMM | muscle |
15 | chr1:79148200-79149000 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
16 | chr1:79148200-79149000 | Enhancers | NHLF | lung |
17 | chr1:79148200-79149800 | Enhancers | HUVEC | blood vessel |
18 | chr1:79148400-79153000 | Weak transcription | Osteobl | bone |
19 | chr1:79148600-79153000 | Weak transcription | HSMM | muscle |
20 | chr1:79148600-79153000 | Weak transcription | NHDF-Ad | bronchial |
21 | chr1:79149000-79152800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
22 | chr1:79149000-79153200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
23 | chr1:79149000-79153400 | Weak transcription | NHLF | lung |
24 | chr1:79149200-79152800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
25 | chr1:79149600-79149800 | Enhancers | Right Atrium | heart |
26 | chr1:79149800-79153400 | Weak transcription | HUVEC | blood vessel |
27 | chr1:79150000-79152600 | Weak transcription | Liver | Liver |
28 | chr1:79150800-79151400 | Enhancers | Brain Germinal Matrix | brain |
29 | chr1:79151200-79156400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
30 | chr1:79152600-79154600 | Enhancers | Liver | Liver |
31 | chr1:79152800-79153400 | Enhancers | Muscle Satellite Cultured Cells | -- |
32 | chr1:79152800-79159000 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
33 | chr1:79153000-79153600 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
34 | chr1:79153000-79155000 | Enhancers | Fetal Brain Male | brain |
35 | chr1:79153000-79155000 | Enhancers | HSMM | muscle |
36 | chr1:79153000-79155200 | Enhancers | Osteobl | bone |
37 | chr1:79153000-79159000 | Enhancers | NHDF-Ad | bronchial |
38 | chr1:79153200-79154200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
39 | chr1:79153200-79158800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
40 | chr1:79153400-79153800 | Enhancers | NHEK | skin |
41 | chr1:79153400-79154000 | Enhancers | HUVEC | blood vessel |
42 | chr1:79153400-79154400 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
43 | chr1:79153400-79154400 | Enhancers | HMEC | breast |
44 | chr1:79153400-79154400 | Enhancers | NHLF | lung |
45 | chr1:79153400-79154600 | Enhancers | NH-A | brain |
46 | chr1:79153400-79155000 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
47 | chr1:79153400-79155000 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
48 | chr1:79153600-79154400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
49 | chr1:79153800-79154400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
50 | chr1:79154200-79154400 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |