Variant report

Variant	nsv508615
Chromosome Location	chr1:152724155-152787503
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:448)
CpG islands
(count:2689)
Chromatin interactive
region (count:21)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:448 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BCL3	chr1:152724829-152725066	GM12878	blood:	n/a	n/a
2	CEBPB	chr1:152752036-152752272	HepG2	liver:	n/a	chr1:152752194-152752205
3	CEBPB	chr1:152741706-152741942	K562	blood:	n/a	chr1:152741819-152741830 chr1:152741818-152741829 chr1:152741818-152741831
4	CEBPB	chr1:152724832-152725032	HepG2	liver:	n/a	n/a
5	CEBPB	chr1:152736423-152736598	A549	lung:	n/a	chr1:152736523-152736534
6	CEBPB	chr1:152741694-152741984	A549	lung:	n/a	chr1:152741819-152741830 chr1:152741818-152741829 chr1:152741818-152741831
7	CEBPB	chr1:152741467-152742184	HCT-116	colon:	n/a	chr1:152741819-152741830 chr1:152741818-152741829 chr1:152741818-152741831
8	CEBPB	chr1:152736359-152736676	HepG2	liver:	n/a	chr1:152736523-152736534
9	CEBPB	chr1:152741735-152741946	K562	blood:	n/a	chr1:152741819-152741830 chr1:152741818-152741829 chr1:152741818-152741831
10	CEBPB	chr1:152751552-152751774	HepG2	liver:	n/a	chr1:152751690-152751701
11	CEBPB	chr1:152741642-152741982	HepG2	liver:	n/a	chr1:152741819-152741830 chr1:152741818-152741829 chr1:152741818-152741831
12	CEBPB	chr1:152741613-152742048	Hela-S3	cervix:	n/a	chr1:152741819-152741830 chr1:152741818-152741829 chr1:152741818-152741831
13	CEBPB	chr1:152752164-152752209	K562	blood:	n/a	chr1:152752194-152752205
14	CEBPB	chr1:152741514-152742064	HCT-116	colon:	n/a	chr1:152741819-152741830 chr1:152741818-152741829 chr1:152741818-152741831
15	CEBPB	chr1:152741680-152741957	IMR90	lung:	n/a	chr1:152741819-152741830 chr1:152741818-152741829 chr1:152741818-152741831
16	CEBPB	chr1:152724775-152725154	IMR90	lung:	n/a	n/a
17	CHD1	chr1:152724614-152725396	IMR90	lung:	n/a	n/a
18	CTCF	chr1:152747420-152747570	GM12865	blood:	n/a	n/a
19	CTCF	chr1:152749820-152749970	GM12871	blood:	n/a	n/a
20	CTCF	chr1:152747400-152747550	GM12872	blood:	n/a	n/a
21	CTCF	chr1:152758620-152758770	SAEC	small airway:	n/a	n/a
22	CTCF	chr1:152750120-152750270	GM12868	blood:	n/a	n/a
23	CTCF	chr1:152747420-152747570	NHEK	skin:	n/a	n/a
24	CTCF	chr1:152750140-152750290	HCT-116	colon:	n/a	n/a
25	CTCF	chr1:152750314-152750315	GM10248	blood:	n/a	n/a
26	CTCF	chr1:152750100-152750250	GM12872	blood:	n/a	n/a
27	CTCF	chr1:152734559-152734823	IMR90	lung:	n/a	n/a
28	CTCF	chr1:152747440-152747590	A549	lung:	n/a	chr1:152747561-152747574
29	CTCF	chr1:152750080-152750230	GM12872	blood:	n/a	n/a
30	CTCF	chr1:152747480-152747630	NB4	blood:	n/a	chr1:152747561-152747574
31	CTCF	chr1:152750180-152750330	Hela-S3	cervix:	n/a	n/a
32	CTCF	chr1:152750154-152750330	GM19239	blood:	n/a	n/a
33	CTCF	chr1:152750120-152750270	RPTEC	kidney:	n/a	n/a
34	CTCF	chr1:152750140-152750290	Hela-S3	cervix:	n/a	n/a
35	CTCF	chr1:152734600-152734750	HMF	breast:	n/a	n/a
36	CTCF	chr1:152750120-152750270	HPF	lung:	n/a	n/a
37	CTCF	chr1:152750123-152750331	MCF-7	breast:	n/a	n/a
38	CTCF	chr1:152747520-152747670	GM12872	blood:	n/a	chr1:152747561-152747574
39	CTCF	chr1:152750094-152750339	Gliobla	brain:	n/a	n/a
40	CTCF	chr1:152750069-152750288	HepG2	liver:	n/a	n/a
41	CTCF	chr1:152772992-152773083	GM10266	blood:	n/a	n/a
42	CTCF	chr1:152747431-152747659	NHEK	skin:	n/a	chr1:152747561-152747574
43	CTCF	chr1:152747520-152747670	GM12873	blood:	n/a	chr1:152747561-152747574
44	CTCF	chr1:152750223-152750240	LNCaP	prostate:	n/a	n/a
45	CTCF	chr1:152750100-152750250	GM12868	blood:	n/a	n/a
46	CTCF	chr1:152747480-152747630	NHEK	skin:	n/a	chr1:152747561-152747574
47	CTCF	chr1:152750030-152750397	K562	blood:	n/a	n/a
48	CTCF	chr1:152750120-152750270	HEK293	kidney:	n/a	n/a
49	CTCF	chr1:152750140-152750290	GM12864	blood:	n/a	n/a
50	CTCF	chr1:152750080-152750230	GM12873	blood:	n/a	n/a

(count:2689 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:152757464-152757514	CMK	blood:	n/a
2	chr1:152760341-152760391	HAEpiC	amniotic membrane:	n/a
3	chr1:152780139-152780189	PrEC	prostate:	n/a
4	chr1:152731590-152731640	Jurkat	blood:	n/a
5	chr1:152769896-152769946	SK-N-SH_RA	brain:	n/a
6	chr1:152757464-152757514	CMK	blood:	n/a
7	chr1:152760341-152760391	HAEpiC	amniotic membrane:	n/a
8	chr1:152780139-152780189	PrEC	prostate:	n/a
9	chr1:152731590-152731640	Jurkat	blood:	n/a
10	chr1:152769896-152769946	SK-N-SH_RA	brain:	n/a
11	chr1:152747562-152747612	CMK	blood:	n/a
12	chr1:152748838-152748888	NHBE	bronchial:	n/a
13	chr1:152777382-152777432	MCF10A-Er-Src	breast:	n/a
14	chr1:152730426-152730476	Jurkat	blood:	n/a
15	chr1:152748838-152748888	HCM	heart:	n/a
16	chr1:152784305-152784355	NT2-D1	testis:	n/a
17	chr1:152748838-152748888	AG04449	skin:	fetal
18	chr1:152784305-152784355	HEK293	kidney:	embryo
19	chr1:152735835-152735885	HAEpiC	amniotic membrane:	n/a
20	chr1:152730231-152730281	HCT-116	colon:	n/a
21	chr1:152758755-152758805	GM12891	blood:	n/a
22	chr1:152758453-152758503	A549	lung:	n/a
23	chr1:152758755-152758805	GM12892	blood:	n/a
24	chr1:152730231-152730281	BE2_C	brain:	n/a
25	chr1:152783674-152783724	PFSK-1	brain:	n/a
26	chr1:152747501-152747551	BE2_C	brain:	n/a
27	chr1:152783674-152783724	NHDF-neo	bronchial:	n/a
28	chr1:152770502-152770552	LNCaP	prostate:	n/a
29	chr1:152783137-152783187	Jurkat	blood:	n/a
30	chr1:152777382-152777432	K562	blood:	n/a
31	chr1:152730361-152730411	GM06990	blood:	n/a
32	chr1:152768267-152768317	IMR90	lung:	fetal
33	chr1:152758453-152758503	Hepatocyte	liver:	n/a
34	chr1:152735835-152735885	NB4	blood:	n/a
35	chr1:152770502-152770552	ProgFib	skin:	n/a
36	chr1:152731590-152731640	HCM	heart:	n/a
37	chr1:152757464-152757514	SK-N-SH_RA	brain:	n/a
38	chr1:152729200-152729250	CMK	blood:	n/a
39	chr1:152783674-152783724	HIPEpiC	eye:	n/a
40	chr1:152780139-152780189	AG09309	skin:	n/a
41	chr1:152768476-152768526	H1-hESC	embryonic stem cell:	embryo
42	chr1:152778580-152778630	PANC-1	pancreas:	n/a
43	chr1:152733140-152733190	HNPCEpiC	eye:	n/a
44	chr1:152730426-152730476	HepG2	liver:	n/a
45	chr1:152759772-152759822	HAEpiC	amniotic membrane:	n/a
46	chr1:152757464-152757514	GM12892	blood:	n/a
47	chr1:152730426-152730476	NT2-D1	testis:	n/a
48	chr1:152730027-152730077	BE2_C	brain:	n/a
49	chr1:152770502-152770552	NHBE	bronchial:	n/a
50	chr1:152730718-152730768	NHDF-neo	bronchial:	n/a

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:152733924..152735488-chr1:152736776..152739020,2	MCF-7	breast:
2	chr1:152775301..152777562-chr1:152781297..152783006,2	K562	blood:
3	chr1:152633504..152636346-chr1:152743964..152745780,2	K562	blood:
4	chr1:152711224..152713888-chr1:152737781..152739633,2	MCF-7	breast:
5	chr1:152733924..152735488-chr1:152736776..152739020,2	MCF-7	breast:
6	chr1:152715699..152717723-chr1:152736198..152738131,2	MCF-7	breast:
7	chr1:152723383..152725427-chr1:152727579..152730521,2	K562	blood:
8	chr1:152718102..152720118-chr1:152722194..152725146,2	K562	blood:
9	chr1:152626242..152627151-chr1:152734184..152735164,3	MCF-7	breast:
10	chr1:152716869..152720481-chr1:152722647..152727810,6	MCF-7	breast:
11	chr1:152715187..152719235-chr1:152774123..152777725,4	MCF-7	breast:
12	chr1:152716371..152718669-chr1:152739081..152740588,2	MCF-7	breast:
13	chr1:152626437..152627174-chr1:152749824..152750672,3	MCF-7	breast:
14	chr1:152728900..152731516-chr1:152732979..152735193,2	MCF-7	breast:
15	chr1:152741230..152741815-chr16:81212739..81213485,2	MCF-7	breast:
16	chr1:152758579..152760547-chr1:152770579..152772468,2	MCF-7	breast:
17	chr1:152745990..152747904-chr1:152750482..152752734,2	MCF-7	breast:
18	chr1:152775705..152778056-chr1:152780040..152782015,2	MCF-7	breast:
19	chr1:152775301..152777562-chr1:152781297..152783006,2	K562	blood:
20	chr1:152769863..152772434-chr1:152783643..152785689,2	MCF-7	breast:
21	chr1:152745990..152747904-chr1:152750482..152752734,2	MCF-7	breast:

No data

Variant related genes	Relation type
LCE1F	TF binding region
KPRP	TF binding region
LCE1E	TF binding region
LCE1D	TF binding region
LCE1C	TF binding region
LCE1B	TF binding region
LCE1F	CpG island
KPRP	CpG island
LCE1E	CpG island
LCE1D	CpG island
LCE1C	CpG island
LCE1B	CpG island
ENSG00000233819	chromatin interactions
ENSG00000186226	chromatin interactions
ENSG00000196734	chromatin interactions
ENSG00000203786	chromatin interactions
ENSG00000187223	chromatin interactions
ENSG00000197084	chromatin interactions

Extended variants
information (count: 2213 )
Associated
traits (count: 122 )

Variant overlapped rSNPs/rCNVs (count:2213 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs569485833	chr1:152724165-152724166	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs575416378	chr1:152724197-152724198	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs141928184	chr1:152724256-152724257	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs144146816	chr1:152724282-152724283	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs148262562	chr1:152724379-152724380	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs540412736	chr1:152724382-152724383	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs554133546	chr1:152724410-152724411	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs182779536	chr1:152724463-152724464	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs542929128	chr1:152724469-152724470	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs141286569	chr1:152724479-152724480	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs531507089	chr1:152724517-152724518	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs545230654	chr1:152724567-152724568	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs376144569	chr1:152724606-152724607	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs12061326	chr1:152724656-152724657	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs527368695	chr1:152724657-152724658	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs547219624	chr1:152724659-152724660	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs567229504	chr1:152724769-152724770	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs1953057	chr1:152724816-152724817	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs549230359	chr1:152724825-152724826	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs150771304	chr1:152724886-152724887	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs12034091	chr1:152724887-152724888	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs188429741	chr1:152724888-152724889	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs16834444	chr1:152724893-152724894	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs554009442	chr1:152724914-152724915	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs573945814	chr1:152724929-152724930	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs543068212	chr1:152724982-152724983	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs556452735	chr1:152725008-152725009	Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs191271596	chr1:152725062-152725063	Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs577662429	chr1:152725065-152725066	Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs117754423	chr1:152725124-152725125	Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs565084687	chr1:152725127-152725128	Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs527518721	chr1:152725193-152725194	Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs183021405	chr1:152725227-152725228	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs550850994	chr1:152725245-152725246	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs541103176	chr1:152725251-152725252	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs546187342	chr1:152725261-152725262	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs71626729	chr1:152725267-152725268	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs564801874	chr1:152725284-152725285	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs560833682	chr1:152725324-152725325	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs201339032	chr1:152725331-152725332	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs115081925	chr1:152725337-152725338	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs148867588	chr1:152725348-152725349	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs73016703	chr1:152725405-152725406	Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs578226615	chr1:152725417-152725418	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs376612359	chr1:152725418-152725419	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs531841748	chr1:152725419-152725420	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs550335287	chr1:152725435-152725436	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs531874641	chr1:152725488-152725489	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs375357739	chr1:152725556-152725557	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs551685734	chr1:152725573-152725574	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:122)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	21129771	CNVD
Non-small cell lung cancer	21385341	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Ewing''s sarcoma	21437220	CNVD
Liposarcoma	21253554	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Breast cancer	20409316	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	21183584	CNVD
Multiple myeloma	16461302	CNVD
Lung cancer	18438408	CNVD
Rett syndrome	21593744	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Systemic lupus erythematosus	21956041	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Non-small cell lung cancer	21829676	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	17899364	CNVD
Bladder cancer	19088036	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21611746	CNVD
Retinoblastoma	19183342	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Ewing''s sarcoma	17952124	CNVD
Osteosarcoma	17242211	CNVD
Ovarian cancer	17242211	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Schizophrenia	18990708	CNVD
Sudden cardiac death	19188705	CNVD
Plasma-cell dyscrasia	16705089	CNVD
Myeloma	17024118	CNVD
Cancer	17060936	CNVD
Multiple myeloma	16616336	CNVD
Type 2 diabetes	19141583	CNVD
Chordoma	18071362	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Urothelial carcinoma	21177765	CNVD
Burkitt''s lymphoma	19759907	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Follicular lymphoma	18703704	CNVD
Breast cancer	21509527	CNVD
Bladder cancer	21909424	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Testicular germ cell tumor	18059402	CNVD
Trisomy 5 syndrome	21098271	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Gastrointestinal cancer	16790693	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Glioblastoma multiforme	21138945	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:186 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:152718400-152724600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr1:152718400-152724600	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr1:152719200-152725000	Weak transcription	NHLF	lung
4	chr1:152720600-152724600	Weak transcription	HMEC	breast
5	chr1:152720800-152724400	Weak transcription	NHEK	skin
6	chr1:152723200-152724600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr1:152723400-152724400	Enhancers	NHDF-Ad	bronchial
8	chr1:152724400-152724800	Weak transcription	NHDF-Ad	bronchial
9	chr1:152724400-152726200	Enhancers	NHEK	skin
10	chr1:152724600-152724800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
11	chr1:152724600-152725200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr1:152724600-152725400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr1:152724600-152725800	Enhancers	HMEC	breast
14	chr1:152724600-152726200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr1:152724600-152726200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr1:152724800-152725000	Enhancers	Muscle Satellite Cultured Cells	--
17	chr1:152724800-152725200	Enhancers	Ovary	ovary
18	chr1:152724800-152725200	Enhancers	HSMM	muscle
19	chr1:152724800-152725200	Enhancers	NH-A	brain
20	chr1:152724800-152725600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr1:152724800-152726800	Enhancers	NHDF-Ad	bronchial
22	chr1:152725000-152725200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
23	chr1:152725000-152726400	Enhancers	NHLF	lung
24	chr1:152725200-152725600	Enhancers	Muscle Satellite Cultured Cells	--
25	chr1:152725200-152726800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr1:152725600-152729400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr1:152725800-152726200	Weak transcription	HMEC	breast
28	chr1:152726200-152726400	Enhancers	HMEC	breast
29	chr1:152726200-152729200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr1:152726200-152729400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr1:152726200-152729400	Weak transcription	NHEK	skin
32	chr1:152726400-152728800	Weak transcription	NHLF	lung
33	chr1:152726400-152729000	Weak transcription	HMEC	breast
34	chr1:152726800-152729400	Weak transcription	NHDF-Ad	bronchial
35	chr1:152726800-152734200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr1:152728800-152730600	Enhancers	NHLF	lung
37	chr1:152729000-152735000	Enhancers	HMEC	breast
38	chr1:152729200-152729400	Weak transcription	Esophagus	oesophagus
39	chr1:152729200-152735000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr1:152729400-152729600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr1:152729400-152729600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr1:152729400-152729600	Enhancers	Esophagus	oesophagus
43	chr1:152729400-152729600	Enhancers	NHDF-Ad	bronchial
44	chr1:152729400-152730400	Enhancers	HSMMtube	muscle
45	chr1:152729400-152730800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr1:152729400-152731000	Enhancers	NHEK	skin
47	chr1:152729400-152733000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr1:152729600-152730000	Weak transcription	NHDF-Ad	bronchial
49	chr1:152729600-152730600	Weak transcription	Esophagus	oesophagus
50	chr1:152730000-152731000	Enhancers	NHDF-Ad	bronchial

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links