Variant report

Variant nsv508691
Chromosome Location chr1:212998319-213028392
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:201 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212976200-212998800 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr1:212979600-213001000 Weak transcription Brain Inferior Temporal Lobe brain
3 chr1:212980800-213001000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:212988400-212998800 Weak transcription Adipose Nuclei Adipose
5 chr1:212988600-212998400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:212990800-212998600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr1:212991000-212998800 Weak transcription Stomach Mucosa stomach
8 chr1:212994000-212999000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:212996400-212998600 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr1:212997000-212998600 Weak transcription HepG2 liver
11 chr1:212997200-213000200 ZNF genes & repeats Fetal Intestine Small intestine
12 chr1:212997400-212999600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:212998600-212998800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:212998600-212999200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:212998600-212999400 Enhancers ES-WA7 Cell Line embryonic stem cell
16 chr1:212998600-212999600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:212998600-212999600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr1:212998600-212999800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
19 chr1:212998600-212999800 ZNF genes & repeats HepG2 liver
20 chr1:212998600-212999800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
21 chr1:212998800-212999800 ZNF genes & repeats Adipose Nuclei Adipose
22 chr1:212998800-212999800 ZNF genes & repeats Stomach Mucosa stomach
23 chr1:212999000-212999400 ZNF genes & repeats Duodenum Mucosa Duodenum
24 chr1:212999000-212999800 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
25 chr1:212999200-212999600 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:212999400-212999600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:212999400-213009400 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr1:212999800-213000400 Weak transcription HepG2 liver
29 chr1:212999800-213000600 Weak transcription Stomach Mucosa stomach
30 chr1:212999800-213003600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr1:212999800-213005000 Weak transcription Adipose Nuclei Adipose
32 chr1:212999800-213005000 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr1:213000200-213000400 Weak transcription Fetal Intestine Small intestine
34 chr1:213000400-213000800 Enhancers HepG2 liver
35 chr1:213000400-213002800 Enhancers Fetal Intestine Small intestine
36 chr1:213000600-213001000 Enhancers Rectal Mucosa Donor 29 rectum
37 chr1:213000600-213001800 Enhancers Stomach Mucosa stomach
38 chr1:213000600-213002200 Enhancers Rectal Mucosa Donor 31 rectum
39 chr1:213000600-213002600 Enhancers Duodenum Mucosa Duodenum
40 chr1:213000600-213002800 Enhancers Fetal Intestine Large intestine
41 chr1:213000800-213001000 Enhancers Sigmoid Colon Sigmoid Colon
42 chr1:213000800-213002400 Flanking Active TSS HepG2 liver
43 chr1:213001000-213001400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:213001000-213001400 Enhancers A549 lung
45 chr1:213001000-213001600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr1:213001000-213005800 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr1:213001400-213004600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:213001400-213005800 Weak transcription A549 lung
49 chr1:213001600-213002200 Enhancers Sigmoid Colon Sigmoid Colon
50 chr1:213001800-213008400 Weak transcription Stomach Mucosa stomach

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