Variant report

Variant nsv511361
Chromosome Location chr7:100548960-100553306
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:165 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:100544800-100550600 Weak transcription Right Atrium heart
2 chr7:100546600-100549600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
3 chr7:100546600-100549800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
4 chr7:100546800-100549600 Enhancers iPS-20b Cell Line embryonic stem cell
5 chr7:100546800-100549800 Enhancers HUES48 Cell Line embryonic stem cell
6 chr7:100547200-100549800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
7 chr7:100547200-100550600 Weak transcription Gastric stomach
8 chr7:100547800-100549000 Weak transcription Spleen Spleen
9 chr7:100547800-100549600 Enhancers ES-I3 Cell Line embryonic stem cell
10 chr7:100547800-100549600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr7:100547800-100549600 Enhancers H9 Cell Line embryonic stem cell
12 chr7:100547800-100549600 Enhancers HUES6 Cell Line embryonic stem cell
13 chr7:100547800-100549600 Enhancers HUES64 Cell Line embryonic stem cell
14 chr7:100548000-100549600 Enhancers ES-WA7 Cell Line embryonic stem cell
15 chr7:100548200-100549800 Enhancers H1 Cell Line embryonic stem cell
16 chr7:100548400-100549000 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
17 chr7:100548400-100549400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr7:100548400-100550600 Weak transcription Liver Liver
19 chr7:100548400-100550600 Weak transcription Colonic Mucosa Colon
20 chr7:100548400-100550600 Strong transcription Rectal Mucosa Donor 31 rectum
21 chr7:100548600-100549200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr7:100548600-100549200 Active TSS Fetal Intestine Small intestine
23 chr7:100548600-100549600 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr7:100548600-100549600 Bivalent Enhancer Duodenum Mucosa Duodenum
25 chr7:100548600-100550000 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr7:100548600-100550600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr7:100548600-100550600 Weak transcription Fetal Intestine Large intestine
28 chr7:100548600-100550600 Weak transcription Fetal Thymus thymus
29 chr7:100548800-100549000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr7:100549000-100549200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr7:100549000-100549400 Enhancers Spleen Spleen
32 chr7:100549200-100549400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr7:100549200-100549400 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
34 chr7:100549400-100549600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
35 chr7:100549400-100550600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr7:100549400-100550600 Strong transcription Fetal Intestine Small intestine
37 chr7:100549600-100549800 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
38 chr7:100549600-100550200 Weak transcription H9 Cell Line embryonic stem cell
39 chr7:100549600-100550400 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr7:100549600-100550600 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr7:100549600-100550600 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr7:100549600-100550600 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr7:100549600-100550600 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
44 chr7:100549600-100550600 Strong transcription Duodenum Mucosa Duodenum
45 chr7:100549600-100551200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr7:100549800-100550200 Weak transcription Spleen Spleen
47 chr7:100549800-100550400 Weak transcription Thymus Thymus
48 chr7:100549800-100550600 Weak transcription H1 Cell Line embryonic stem cell
49 chr7:100549800-100550600 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr7:100549800-100550600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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