Variant report

Variant nsv511632
Chromosome Location chr21:44963686-44987079
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:44958400-44964400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr21:44962800-44963800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr21:44962800-44963800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
4 chr21:44963000-44963800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr21:44963800-44966200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr21:44964400-44965600 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr21:44965600-44967600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr21:44966200-44966400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr21:44966400-44969600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr21:44967600-44976800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr21:44967800-44968400 Enhancers HSMM muscle
12 chr21:44967800-44968600 Enhancers Muscle Satellite Cultured Cells --
13 chr21:44968000-44970400 Enhancers HSMMtube muscle
14 chr21:44968400-44969400 Weak transcription HSMM muscle
15 chr21:44968600-44969600 Weak transcription Muscle Satellite Cultured Cells --
16 chr21:44968600-44973400 Weak transcription Thymus Thymus
17 chr21:44969000-44970200 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
18 chr21:44969000-44970200 Enhancers Fetal Lung lung
19 chr21:44969000-44970400 Enhancers Fetal Muscle Leg muscle
20 chr21:44969000-44971400 Enhancers Placenta Placenta
21 chr21:44969400-44970000 Enhancers Fetal Stomach stomach
22 chr21:44969400-44970400 Enhancers HSMM muscle
23 chr21:44969600-44969800 Enhancers Muscle Satellite Cultured Cells --
24 chr21:44969600-44970000 Enhancers Fetal Muscle Trunk muscle
25 chr21:44970400-44973200 Weak transcription Fetal Muscle Leg muscle
26 chr21:44970400-44982400 Weak transcription HSMMtube muscle
27 chr21:44973000-44973600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr21:44973200-44973600 Enhancers Fetal Muscle Leg muscle
29 chr21:44973400-44973600 Enhancers Thymus Thymus
30 chr21:44973600-44973800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr21:44973800-44982400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr21:44974600-44975400 Enhancers HepG2 liver
33 chr21:44975000-44975400 Enhancers Spleen Spleen
34 chr21:44975000-44975600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
35 chr21:44975600-44982400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr21:44976800-44980400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr21:44978200-44982200 Weak transcription HMEC breast
38 chr21:44980400-44982200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr21:44980400-44998400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr21:44982000-44984800 Weak transcription A549 lung
41 chr21:44982200-44983200 Enhancers NHEK skin
42 chr21:44982200-44983400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr21:44982200-44983400 Enhancers HMEC breast
44 chr21:44982400-44982600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
45 chr21:44982400-44982600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr21:44982400-44982600 Enhancers HSMM muscle
47 chr21:44982400-44982800 Enhancers Lung lung
48 chr21:44982400-44983000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr21:44982400-44983000 Enhancers Esophagus oesophagus
50 chr21:44982400-44983200 Strong transcription HSMMtube muscle

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