Variant report

Variant	nsv516351
Chromosome Location	chr12:10759489-10764045
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:153)
CpG islands
(count:61)
Chromatin interactive
region (count:18)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:153 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr12:10762839-10762990	HepG2	liver:	n/a	n/a
2	CTCF	chr12:10760459-10760784	A549	lung:	n/a	n/a
3	CTCF	chr12:10760614-10760700	GM12878	blood:	n/a	n/a
4	CTCF	chr12:10760479-10760975	HCT-116	colon:	n/a	n/a
5	CTCF	chr12:10760600-10760750	GM12866	blood:	n/a	n/a
6	CTCF	chr12:10760484-10760748	HepG2	liver:	n/a	n/a
7	CTCF	chr12:10760560-10760710	HMF	breast:	n/a	n/a
8	CTCF	chr12:10760580-10760730	AoAF	blood vessel:	n/a	n/a
9	CTCF	chr12:10760560-10760710	Hela-S3	cervix:	n/a	n/a
10	CTCF	chr12:10760600-10760750	AG04449	skin:	n/a	n/a
11	CTCF	chr12:10760560-10760710	AG09309	skin:	n/a	n/a
12	CTCF	chr12:10760577-10760702	LNCaP	prostate:	n/a	n/a
13	CTCF	chr12:10760580-10760730	BE2_C	brain:	n/a	n/a
14	CTCF	chr12:10760560-10760710	AoAF	blood vessel:	n/a	n/a
15	CTCF	chr12:10760580-10760730	RPTEC	kidney:	n/a	n/a
16	CTCF	chr12:10760181-10761174	A549	lung:	n/a	n/a
17	CTCF	chr12:10760540-10760690	HAc	cerebellar:	n/a	n/a
18	CTCF	chr12:10760540-10760804	MCF-7	breast:	n/a	n/a
19	CTCF	chr12:10760580-10760730	HCT-116	colon:	n/a	n/a
20	CTCF	chr12:10760540-10760690	AG10803	skin:	n/a	n/a
21	CTCF	chr12:10760560-10760710	RPTEC	kidney:	n/a	n/a
22	CTCF	chr12:10760622-10760666	LNCaP	prostate:	n/a	n/a
23	CTCF	chr12:10760540-10760690	HFF-Myc	foreskin:	n/a	n/a
24	CTCF	chr12:10760560-10760710	AG04450	lung:	n/a	n/a
25	CTCF	chr12:10760498-10760772	MCF-7	breast:	n/a	n/a
26	CTCF	chr12:10760612-10760692	Kidney_OC	kidney:	n/a	n/a
27	CTCF	chr12:10760620-10760770	GM12870	blood:	n/a	n/a
28	CTCF	chr12:10760592-10760669	GM10248	blood:	n/a	n/a
29	CTCF	chr12:10760540-10760690	GM12865	blood:	n/a	n/a
30	CTCF	chr12:10760580-10760730	MCF-7	breast:	n/a	n/a
31	CTCF	chr12:10760560-10760710	HVMF	connective:	n/a	n/a
32	CTCF	chr12:10760440-10760590	HFF-Myc	foreskin:	n/a	n/a
33	CTCF	chr12:10760560-10760710	HBMEC	blood vessel:	n/a	n/a
34	CTCF	chr12:10760580-10760730	BJ	skin:	n/a	n/a
35	CTCF	chr12:10760580-10760730	HA-sp	spinal cord:	n/a	n/a
36	CTCF	chr12:10760540-10760690	HMF	breast:	n/a	n/a
37	CTCF	chr12:10760920-10761070	AG10803	skin:	n/a	n/a
38	CTCF	chr12:10760600-10760750	HAc	cerebellar:	n/a	n/a
39	CTCF	chr12:10760580-10760730	Caco-2	colon:	n/a	n/a
40	CTCF	chr12:10760596-10760712	Gliobla	brain:	n/a	n/a
41	CTCF	chr12:10760605-10760690	GM10266	blood:	n/a	n/a
42	CTCF	chr12:10760540-10760690	NHEK	skin:	n/a	n/a
43	CTCF	chr12:10760700-10760850	A549	lung:	n/a	n/a
44	CTCF	chr12:10760620-10760770	AG09309	skin:	n/a	n/a
45	CTCF	chr12:10760540-10760690	WI-38	lung:	n/a	n/a
46	CTCF	chr12:10760920-10761070	GM12873	blood:	n/a	n/a
47	CTCF	chr12:10760580-10760730	NHDF-neo	bronchial:	n/a	n/a
48	CTCF	chr12:10760443-10760910	A549	lung:	n/a	n/a
49	CTCF	chr12:10760585-10760708	Medullo	brain:	n/a	n/a
50	CTCF	chr12:10760548-10760725	Spleen_OC	spleen:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:10763670-10763720	HNPCEpiC	eye:	n/a
2	chr12:10763670-10763720	NHBE	bronchial:	n/a
3	chr12:10763670-10763720	A549	lung:	n/a
4	chr12:10763670-10763720	BJ	skin:	n/a
5	chr12:10763670-10763720	HRCEpiC	kidney:	n/a
6	chr12:10763670-10763720	SK-N-MC	brain:	n/a
7	chr12:10763670-10763720	PFSK-1	brain:	n/a
8	chr12:10763670-10763720	T-47D	breast:	n/a
9	chr12:10763670-10763720	SK-N-SH	brain:	n/a
10	chr12:10763670-10763720	HL-60	blood:	n/a
11	chr12:10763670-10763720	AG09319	gingival:	n/a
12	chr12:10763670-10763720	HEEpiC	esophagus:	n/a
13	chr12:10763670-10763720	RPTEC	kidney:	n/a
14	chr12:10763670-10763720	NHDF-neo	bronchial:	n/a
15	chr12:10763670-10763720	NT2-D1	testis:	n/a
16	chr12:10763670-10763720	HUVEC	blood vessel:	n/a
17	chr12:10763670-10763720	PrEC	prostate:	n/a
18	chr12:10763670-10763720	GM06990	blood:	n/a
19	chr12:10763670-10763720	SKMC	muscle:	n/a
20	chr12:10763670-10763720	ECC-1	luminal epithelium:	n/a
21	chr12:10763670-10763720	GM12878	blood:	n/a
22	chr12:10763670-10763720	U87	brain:	n/a
23	chr12:10763670-10763720	ovcar-3	ovarian:	n/a
24	chr12:10763670-10763720	Jurkat	blood:	n/a
25	chr12:10763670-10763720	NB4	blood:	n/a
26	chr12:10763670-10763720	AG04449	skin:	fetal
27	chr12:10763670-10763720	MCF-7	breast:	n/a
28	chr12:10763670-10763720	HIPEpiC	eye:	n/a
29	chr12:10763670-10763720	AoSMC	blood vessel:	n/a
30	chr12:10763670-10763720	K562	blood:	n/a
31	chr12:10763670-10763720	PANC-1	pancreas:	n/a
32	chr12:10763670-10763720	Hela-S3	cervix:	n/a
33	chr12:10763670-10763720	Hepatocyte	liver:	n/a
34	chr12:10763670-10763720	HPAEpiC	pulmonary alveolar:	n/a
35	chr12:10763670-10763720	CMK	blood:	n/a
36	chr12:10763670-10763720	ProgFib	skin:	n/a
37	chr12:10763670-10763720	AG09309	skin:	n/a
38	chr12:10763670-10763720	BE2_C	brain:	n/a
39	chr12:10763670-10763720	HepG2	liver:	n/a
40	chr12:10763670-10763720	GM19239	blood:	n/a
41	chr12:10763670-10763720	LNCaP	prostate:	n/a
42	chr12:10763670-10763720	GM12891	blood:	n/a
43	chr12:10763670-10763720	HEK293	kidney:	embryo
44	chr12:10763670-10763720	HRPEpiC	eye:	n/a
45	chr12:10763670-10763720	MCF10A-Er-Src	breast:	n/a
46	chr12:10763670-10763720	AG10803	skin:	n/a
47	chr12:10763670-10763720	GM12892	blood:	n/a
48	chr12:10763670-10763720	HMEC	breast:	n/a
49	chr12:10763670-10763720	Caco-2	colon:	n/a
50	chr12:10763670-10763720	SAEC	small airway:	n/a

(count:18 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:10763668..10768180-chr12:10873034..10877438,4	K562	blood:
2	chr12:10761406..10764167-chr12:10764893..10767913,5	MCF-7	breast:
3	chr12:10760140..10761082-chr12:10826372..10827064,4	MCF-7	breast:
4	chr12:10753471..10755289-chr12:10762745..10764723,2	MCF-7	breast:
5	chr12:10758501..10762466-chr12:10825549..10828463,4	MCF-7	breast:
6	chr12:10752173..10753763-chr12:10760040..10762966,2	MCF-7	breast:
7	chr12:10528733..10530247-chr12:10762165..10764402,2	K562	blood:
8	chr12:10753486..10755683-chr12:10758710..10760560,2	MCF-7	breast:
9	chr12:10760446..10762203-chr12:11323888..11325802,2	K562	blood:
10	chr12:10754715..10757719-chr12:10762132..10766161,5	MCF-7	breast:
11	chr12:10759828..10762348-chr12:10763400..10769792,9	K562	blood:
12	chr12:10759828..10762348-chr12:10763400..10769792,9	K562	blood:
13	chr12:10763668..10768484-chr12:10873757..10876876,5	K562	blood:
14	chr12:10760650..10763319-chr12:10825265..10828061,2	K562	blood:
15	chr12:10713530..10716257-chr12:10762530..10764410,2	MCF-7	breast:
16	chr12:10757768..10761323-chr12:10763648..10767654,5	MCF-7	breast:
17	chr12:10757768..10761323-chr12:10763648..10767654,5	MCF-7	breast:
18	chr12:10752498..10759716-chr12:10759735..10767266,16	K562	blood:

No data

Variant related genes	Relation type
MAGOHB	TF binding region
MAGOHB	CpG island
ENSG00000060138	chromatin interactions
ENSG00000111196	chromatin interactions
ENSG00000111215	chromatin interactions
ENSG00000212127	chromatin interactions
ENSG00000256712	chromatin interactions
ENSG00000256667	chromatin interactions
ENSG00000256537	chromatin interactions
ENSG00000060140	chromatin interactions

Extended variants
information (count: 175 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:175 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10845179	chr12:10759489-10759490	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs575012486	chr12:10759491-10759492	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs537762021	chr12:10759512-10759513	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs554668658	chr12:10759530-10759531	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs10772334	chr12:10759573-10759574	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs577023410	chr12:10759579-10759580	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs7976279	chr12:10759611-10759612	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs370232338	chr12:10759627-10759628	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs573033851	chr12:10759660-10759661	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs144941535	chr12:10759662-10759663	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs562133930	chr12:10759723-10759724	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs552898929	chr12:10759749-10759750	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs368875334	chr12:10759760-10759761	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs530683095	chr12:10759800-10759801	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs550860762	chr12:10759816-10759817	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs146819636	chr12:10759946-10759947	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs564227378	chr12:10760033-10760034	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs533160500	chr12:10760050-10760051	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs573091595	chr12:10760064-10760065	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs138721380	chr12:10760085-10760086	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs566560810	chr12:10760096-10760097	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs546763899	chr12:10760097-10760098	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs73257978	chr12:10760131-10760132	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs548666030	chr12:10760132-10760133	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs149362161	chr12:10760171-10760172	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs143699987	chr12:10760172-10760173	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs2125091	chr12:10760180-10760181	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs577157173	chr12:10760231-10760232	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs539629655	chr12:10760234-10760235	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs148120352	chr12:10760280-10760281	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs368024779	chr12:10760285-10760286	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs564884904	chr12:10760287-10760288	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs573227568	chr12:10760301-10760302	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs2290718	chr12:10760305-10760306	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs561894354	chr12:10760306-10760307	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs184434348	chr12:10760327-10760328	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs3947920	chr12:10760328-10760329	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs2125090	chr12:10760335-10760336	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs2125089	chr12:10760380-10760381	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs547169299	chr12:10760386-10760387	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs544221143	chr12:10760392-10760393	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs376809682	chr12:10760428-10760429	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs540410003	chr12:10760440-10760441	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs115740958	chr12:10760443-10760444	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs35870539	chr12:10760467-10760468	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs112563893	chr12:10760476-10760477	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs202176328	chr12:10760480-10760481	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
48	rs369360533	chr12:10760576-10760577	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
49	rs111419124	chr12:10760597-10760598	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
50	rs10845180	chr12:10760624-10760625	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:89)

Disease	PMID	Source
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21611746	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Squamous cell cancer	19607727	CNVD
Prostate cancer	16573809	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute myeloid leukemia	17268525	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16461572	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung adenocarcinoma	21935476	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD

Chromatin state (count:302 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10725600-10765000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr12:10725800-10761400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr12:10726400-10759800	Weak transcription	NHLF	lung
4	chr12:10730000-10762000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr12:10730600-10764800	Weak transcription	Lung	lung
6	chr12:10731600-10760800	Weak transcription	Fetal Brain Female	brain
7	chr12:10732000-10759600	Weak transcription	Fetal Intestine Large	intestine
8	chr12:10732000-10759800	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr12:10732200-10759600	Weak transcription	Left Ventricle	heart
10	chr12:10732200-10761400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
11	chr12:10732200-10764800	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr12:10732400-10759600	Weak transcription	Colon Smooth Muscle	Colon
13	chr12:10732400-10764200	Weak transcription	Pancreas	Pancrea
14	chr12:10732600-10759600	Weak transcription	HMEC	breast
15	chr12:10732800-10759600	Weak transcription	Brain Hippocampus Middle	brain
16	chr12:10733400-10759600	Weak transcription	HUVEC	blood vessel
17	chr12:10733600-10759800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr12:10733800-10760000	Weak transcription	Fetal Brain Male	brain
19	chr12:10734000-10764000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr12:10734000-10764600	Weak transcription	Thymus	Thymus
21	chr12:10734200-10759600	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr12:10734200-10762200	Weak transcription	Fetal Muscle Leg	muscle
23	chr12:10734200-10764000	Weak transcription	Fetal Stomach	stomach
24	chr12:10734400-10764600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr12:10735200-10759600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr12:10735200-10764600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr12:10735400-10764000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr12:10738800-10764000	Weak transcription	Fetal Intestine Small	intestine
29	chr12:10739400-10761400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
30	chr12:10742000-10761200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
31	chr12:10742600-10764600	Weak transcription	Small Intestine	intestine
32	chr12:10742800-10764800	Weak transcription	Psoas Muscle	Psoas
33	chr12:10743400-10759600	Weak transcription	Brain Angular Gyrus	brain
34	chr12:10743400-10759600	Weak transcription	Brain Anterior Caudate	brain
35	chr12:10743400-10765400	Weak transcription	Gastric	stomach
36	chr12:10744000-10765200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr12:10744000-10765400	Weak transcription	Aorta	Aorta
38	chr12:10744200-10759600	Weak transcription	Muscle Satellite Cultured Cells	--
39	chr12:10744200-10759600	Weak transcription	Sigmoid Colon	Sigmoid Colon
40	chr12:10744200-10764000	Weak transcription	Ovary	ovary
41	chr12:10744200-10764600	Weak transcription	HSMMtube	muscle
42	chr12:10744200-10765400	Weak transcription	Esophagus	oesophagus
43	chr12:10745000-10759600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
44	chr12:10747000-10764800	Weak transcription	Right Ventricle	heart
45	chr12:10748000-10762400	Weak transcription	Hela-S3	cervix
46	chr12:10748200-10760000	Weak transcription	Stomach Smooth Muscle	stomach
47	chr12:10748400-10764600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
48	chr12:10748600-10759800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr12:10749400-10764800	Weak transcription	Primary neutrophils fromperipheralblood	blood
50	chr12:10750200-10761400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links