Variant report

Variant	nsv516516
Chromosome Location	chr6:86234835-86278691
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:86246818-86247127	HepG2	liver:	n/a	n/a
2	CCNT2	chr6:86248658-86248776	K562	blood:	n/a	n/a
3	CEBPB	chr6:86278204-86278358	H1-hESC	embryonic stem cell:	n/a	n/a
4	CEBPB	chr6:86278171-86278479	K562	blood:	n/a	n/a
5	CEBPB	chr6:86257726-86258057	IMR90	lung:	n/a	chr6:86257898-86257909
6	CEBPB	chr6:86278173-86278463	K562	blood:	n/a	n/a
7	CEBPB	chr6:86257737-86258093	HepG2	liver:	n/a	chr6:86257898-86257909
8	CEBPB	chr6:86278142-86278586	A549	lung:	n/a	n/a
9	CEBPB	chr6:86278161-86278480	Hela-S3	cervix:	n/a	n/a
10	CEBPB	chr6:86271489-86271780	IMR90	lung:	n/a	n/a
11	CEBPB	chr6:86246980-86247026	H1-hESC	embryonic stem cell:	n/a	n/a
12	CEBPB	chr6:86278090-86278502	A549	lung:	n/a	n/a
13	CEBPB	chr6:86278177-86278481	HepG2	liver:	n/a	n/a
14	CEBPB	chr6:86257775-86257998	A549	lung:	n/a	chr6:86257898-86257909
15	CHD2	chr6:86261130-86261183	Hela-S3	cervix:	n/a	n/a
16	CTCF	chr6:86246580-86246730	HMEC	breast:	n/a	n/a
17	CTCF	chr6:86246860-86247010	BJ	skin:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
18	CTCF	chr6:86236164-86236234	Kidney_OC	kidney:	n/a	n/a
19	CTCF	chr6:86246829-86247080	Spleen_OC	spleen:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
20	CTCF	chr6:86246880-86247030	HA-sp	spinal cord:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
21	CTCF	chr6:86246900-86247050	AG04450	lung:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
22	CTCF	chr6:86246877-86247061	Kidney_OC	kidney:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
23	CTCF	chr6:86246980-86247130	AG09309	skin:	n/a	n/a
24	CTCF	chr6:86247060-86247210	GM12869	blood:	n/a	n/a
25	CTCF	chr6:86246660-86246810	HVMF	connective:	n/a	n/a
26	CTCF	chr6:86246920-86247070	HRPEpiC	eye:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
27	CTCF	chr6:86246880-86247030	GM12868	blood:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
28	CTCF	chr6:86266249-86266323	Fibrobl	skin:	n/a	n/a
29	CTCF	chr6:86247220-86247370	GM12868	blood:	n/a	n/a
30	CTCF	chr6:86246740-86246890	AG09309	skin:	n/a	n/a
31	CTCF	chr6:86246508-86246533	GM13977	blood:	n/a	n/a
32	CTCF	chr6:86246880-86247030	HPF	lung:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
33	CTCF	chr6:86247220-86247370	HCPEpiC	choroid plexus:	n/a	n/a
34	CTCF	chr6:86246880-86247030	AG10803	skin:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
35	CTCF	chr6:86246920-86247070	HCM	heart:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
36	CTCF	chr6:86247220-86247370	HEK293	kidney:	n/a	n/a
37	CTCF	chr6:86246260-86246410	AoAF	blood vessel:	n/a	n/a
38	CTCF	chr6:86246860-86247010	HVMF	connective:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
39	CTCF	chr6:86246840-86246990	GM12873	blood:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
40	CTCF	chr6:86246540-86246690	HCFaa	heart:	n/a	n/a
41	CTCF	chr6:86254402-86254444	GM13977	blood:	n/a	n/a
42	CTCF	chr6:86246860-86247010	HCPEpiC	choroid plexus:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
43	CTCF	chr6:86246742-86247147	GM12878	blood:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
44	CTCF	chr6:86246880-86247030	GM12874	blood:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
45	CTCF	chr6:86246580-86246730	AoAF	blood vessel:	n/a	n/a
46	CTCF	chr6:86246900-86247050	HL-60	blood:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
47	CTCF	chr6:86246880-86247030	SK-N-SH_RA	brain:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
48	CTCF	chr6:86247100-86247250	HCT-116	colon:	n/a	n/a
49	CTCF	chr6:86246880-86247030	GM12872	blood:	n/a	chr6:86246941-86246962 chr6:86246947-86246963 chr6:86246946-86246964 chr6:86246952-86246961 chr6:86246948-86246961
50	CTCF	chr6:86247120-86247270	GM12872	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:86244402..86246705-chr6:86351828..86353927,2	K562	blood:
2	chr6:86246140..86247926-chr6:86387829..86390203,2	K562	blood:
3	chr6:86278096..86280709-chr6:86299065..86302030,2	K562	blood:
4	chr6:86230515..86233270-chr6:86240880..86242983,2	MCF-7	breast:
5	chr6:86244360..86246151-chr6:86281101..86282612,2	K562	blood:
6	chr6:86256251..86258999-chr6:86261062..86262660,2	K562	blood:
7	chr6:86262845..86265792-chr6:86354340..86355847,2	K562	blood:
8	chr6:86246870..86249179-chr6:86250224..86253982,4	K562	blood:
9	chr6:86258544..86261104-chr6:86387142..86389153,2	K562	blood:
10	chr6:86249376..86250949-chr6:86302957..86305018,2	MCF-7	breast:
11	chr1:121483913..121485978-chr6:86260101..86262043,2	MCF-7	breast:
12	chr6:86246106..86247862-chr6:86386298..86390203,3	K562	blood:
13	chr6:86260582..86262333-chr6:86283688..86285782,2	K562	blood:
14	chr6:86268112..86269653-chr6:86301871..86303765,2	MCF-7	breast:
15	chr6:86256251..86258999-chr6:86261062..86262660,2	K562	blood:
16	chr6:86274096..86275733-chr6:86301959..86304370,2	MCF-7	breast:
17	chr6:86264055..86265860-chr6:86266095..86267988,2	MCF-7	breast:
18	chr6:86272075..86276621-chr6:86278796..86281589,4	K562	blood:
19	chr6:86277967..86280027-chr6:86387160..86389820,3	K562	blood:
20	chr6:86264055..86265860-chr6:86266095..86267988,2	MCF-7	breast:
21	chr6:86245425..86248526-chr6:86302419..86304294,3	MCF-7	breast:
22	chr6:86259058..86261534-chr6:86261647..86264216,2	MCF-7	breast:
23	chr6:86258616..86262862-chr6:86386972..86389770,3	K562	blood:
24	chr6:86254209..86255785-chr6:86263781..86265838,2	K562	blood:
25	chr6:86252970..86257934-chr6:86299533..86304034,5	K562	blood:
26	chr6:86252068..86253967-chr6:86254803..86256985,2	MCF-7	breast:
27	chr6:86263461..86265279-chr6:86276918..86279076,2	K562	blood:
28	chr6:86230797..86232766-chr6:86233829..86236046,2	K562	blood:
29	chr6:86227398..86231196-chr6:86231483..86235507,4	K562	blood:
30	chr6:86253602..86255869-chr6:86388137..86389916,2	K562	blood:
31	chr6:86254209..86255785-chr6:86263781..86265838,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM165A-1	chr6:86270792-86270928	ENSG00000223998.1
2	lnc-FAM165A-1	chr6:86270033-86270491	ENSG00000223998.1

Variant related genes	Relation type
SNX14	TF binding region
ENSG00000135316	chromatin interactions
ENSG00000203875	chromatin interactions
ENSG00000135317	chromatin interactions

Extended variants
information (count: 1472 )
Associated
traits (count: 106 )

Variant overlapped rSNPs/rCNVs (count:1472 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs17440806	chr6:86234835-86234836	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs9450291	chr6:86234888-86234889	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs572954574	chr6:86234889-86234890	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs72905350	chr6:86234975-86234976	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs574329025	chr6:86235025-86235026	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs180682332	chr6:86235041-86235042	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs565218167	chr6:86235044-86235045	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs541437178	chr6:86235075-86235076	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs34898046	chr6:86235088-86235089	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs146488425	chr6:86235119-86235120	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs371679263	chr6:86235125-86235126	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs141052796	chr6:86235152-86235153	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs113148797	chr6:86235301-86235302	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs561208070	chr6:86235351-86235352	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs183961536	chr6:86235380-86235381	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs564665427	chr6:86235381-86235382	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs112040794	chr6:86235411-86235412	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs528298320	chr6:86235490-86235491	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs369712360	chr6:86235541-86235542	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs138608611	chr6:86235543-86235544	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs562249890	chr6:86235548-86235549	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs529654144	chr6:86235578-86235579	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs550990812	chr6:86235592-86235593	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs189804185	chr6:86235596-86235597	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs533448275	chr6:86235634-86235635	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs530173482	chr6:86235659-86235660	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs570597985	chr6:86235681-86235682	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs534521214	chr6:86235743-86235744	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs181408834	chr6:86235754-86235755	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs140176719	chr6:86235783-86235784	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs375136586	chr6:86235820-86235821	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs200507495	chr6:86235857-86235858	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs368928892	chr6:86235934-86235935	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs567689466	chr6:86235944-86235945	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs560412878	chr6:86235975-86235976	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs535408665	chr6:86235993-86235994	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs369491134	chr6:86236002-86236003	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs186873008	chr6:86236114-86236115	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs545462860	chr6:86236138-86236139	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs557567943	chr6:86236155-86236156	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs150300551	chr6:86236156-86236157	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs9344533	chr6:86236188-86236189	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs562354322	chr6:86236226-86236227	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs529589007	chr6:86236228-86236229	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs567015365	chr6:86236238-86236239	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs62443333	chr6:86236251-86236252	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs370042600	chr6:86236261-86236262	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs562837811	chr6:86236299-86236300	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs115865365	chr6:86236352-86236353	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs137878648	chr6:86236369-86236370	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:106)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	20823134	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
craniofacial dysmorphism	21918468	CNVD
Myelofibrosis	22110671	CNVD
Neurodevelopmental disorder	22521361	CNVD
abnormal development	18461090	CNVD
Myelodysplastic syndrome	18508791	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	21364760	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD

Chromatin state (count:1099 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:86176800-86242600	Weak transcription	Gastric	stomach
2	chr6:86207200-86238400	Weak transcription	Esophagus	oesophagus
3	chr6:86208800-86284600	Weak transcription	Small Intestine	intestine
4	chr6:86208800-86289200	Weak transcription	Pancreas	Pancrea
5	chr6:86211400-86246400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr6:86212000-86246600	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr6:86218000-86260200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr6:86218400-86266200	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr6:86219200-86246200	Strong transcription	Primary T helper cells fromperipheralblood	blood
10	chr6:86220200-86252400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr6:86220200-86257200	Weak transcription	Fetal Heart	heart
12	chr6:86221000-86245600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr6:86221400-86242800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr6:86221800-86285800	Weak transcription	Fetal Brain Male	brain
15	chr6:86222200-86249800	Weak transcription	Aorta	Aorta
16	chr6:86222600-86243800	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr6:86222600-86289400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr6:86223000-86242600	Weak transcription	Right Ventricle	heart
19	chr6:86223200-86235400	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr6:86223200-86242200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr6:86223200-86242200	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr6:86223200-86242600	Weak transcription	Psoas Muscle	Psoas
23	chr6:86223200-86242600	Weak transcription	Thymus	Thymus
24	chr6:86223200-86243000	Weak transcription	Brain Angular Gyrus	brain
25	chr6:86223200-86260200	Weak transcription	Lung	lung
26	chr6:86223400-86262800	Weak transcription	Stomach Mucosa	stomach
27	chr6:86223400-86285000	Weak transcription	Brain Substantia Nigra	brain
28	chr6:86223800-86235800	Weak transcription	HMEC	breast
29	chr6:86223800-86262600	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr6:86224000-86235200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
31	chr6:86224000-86235800	Weak transcription	K562	blood
32	chr6:86224000-86243000	Weak transcription	Brain Anterior Caudate	brain
33	chr6:86224000-86252600	Weak transcription	Brain Germinal Matrix	brain
34	chr6:86224000-86255800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr6:86224000-86279000	Weak transcription	NHLF	lung
36	chr6:86224200-86242000	Weak transcription	NHEK	skin
37	chr6:86224200-86302600	Weak transcription	Colonic Mucosa	Colon
38	chr6:86224400-86252600	Weak transcription	Colon Smooth Muscle	Colon
39	chr6:86225000-86241400	Weak transcription	Left Ventricle	heart
40	chr6:86227200-86242600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr6:86227400-86243000	Weak transcription	A549	lung
42	chr6:86227600-86235200	Weak transcription	HUES64 Cell Line	embryonic stem cell
43	chr6:86227600-86237200	Weak transcription	HepG2	liver
44	chr6:86227800-86252400	Weak transcription	HUES6 Cell Line	embryonic stem cell
45	chr6:86228600-86246400	Strong transcription	Primary T cells fromperipheralblood	blood
46	chr6:86229800-86236000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
47	chr6:86229800-86239200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr6:86229800-86246400	Strong transcription	Primary monocytes fromperipheralblood	blood
49	chr6:86230000-86263000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
50	chr6:86230400-86236600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links