Variant report

Variant nsv517362
Chromosome Location chr19:19846458-19872093
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19844400-19847000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr19:19844400-19848200 Weak transcription K562 blood
3 chr19:19844400-19848600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr19:19847000-19847200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
5 chr19:19848200-19848600 Enhancers K562 blood
6 chr19:19848200-19851200 Weak transcription Stomach Smooth Muscle stomach
7 chr19:19848600-19849000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
8 chr19:19849000-19849800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr19:19849600-19850400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
10 chr19:19849800-19850400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
11 chr19:19850000-19850200 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
12 chr19:19850400-19857000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr19:19852800-19853800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
14 chr19:19853000-19862600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
15 chr19:19853200-19855600 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
16 chr19:19853400-19853600 Bivalent/Poised TSS HepG2 liver
17 chr19:19853600-19853800 Bivalent Enhancer HepG2 liver
18 chr19:19853800-19854000 Flanking Bivalent TSS/Enh HepG2 liver
19 chr19:19854000-19854800 Bivalent Enhancer HepG2 liver
20 chr19:19854600-19854800 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
21 chr19:19856600-19859000 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
22 chr19:19856600-19862200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
23 chr19:19857000-19858000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
24 chr19:19857200-19857400 Bivalent/Poised TSS Fetal Brain Female brain
25 chr19:19857400-19857600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
26 chr19:19858000-19858400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr19:19858400-19863200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
28 chr19:19859000-19859200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr19:19859000-19859600 ZNF genes & repeats Spleen Spleen
30 chr19:19859200-19865000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr19:19859600-19860800 Weak transcription Spleen Spleen
32 chr19:19859800-19870800 Weak transcription Placenta Amnion Placenta Amnion
33 chr19:19860400-19861400 Weak transcription Gastric stomach
34 chr19:19860800-19862400 ZNF genes & repeats Spleen Spleen
35 chr19:19861000-19875000 Weak transcription Brain Angular Gyrus brain
36 chr19:19861400-19862200 Strong transcription Gastric stomach
37 chr19:19862200-19862800 Enhancers Pancreas Pancrea
38 chr19:19862200-19869200 Weak transcription Gastric stomach
39 chr19:19862400-19862800 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
40 chr19:19862400-19869000 Weak transcription Spleen Spleen
41 chr19:19862800-19874000 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr19:19862800-19886400 Weak transcription Pancreas Pancrea
43 chr19:19865200-19865600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
44 chr19:19865200-19886400 Weak transcription Right Ventricle heart
45 chr19:19865400-19873800 Weak transcription Ovary ovary
46 chr19:19865600-19879000 Weak transcription Brain Substantia Nigra brain
47 chr19:19865800-19866200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
48 chr19:19866200-19868600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr19:19866200-19886000 Weak transcription Brain Hippocampus Middle brain
50 chr19:19866600-19868400 Weak transcription Brain Cingulate Gyrus brain

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