Variant report

Variant	nsv517459
Chromosome Location	chr5:180133616-180210656
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:350)
CpG islands
(count:366)
Chromatin interactive
region (count:34)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:350 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr5:180144959-180145359	GM12878	blood:	n/a	n/a
2	BATF	chr5:180169789-180169977	GM12878	blood:	n/a	n/a
3	BATF	chr5:180145061-180145379	GM12878	blood:	n/a	chr5:180145207-180145218
4	BATF	chr5:180145040-180145312	GM12878	blood:	n/a	chr5:180145207-180145218
5	BCL11A	chr5:180145000-180145348	GM12878	blood:	n/a	chr5:180145235-180145244
6	BCL11A	chr5:180145100-180145299	GM12878	blood:	n/a	chr5:180145235-180145244
7	CBX3	chr5:180198766-180199290	K562	blood:	n/a	n/a
8	CBX3	chr5:180208965-180209392	K562	blood:	n/a	n/a
9	CBX3	chr5:180198844-180199194	K562	blood:	n/a	n/a
10	CBX3	chr5:180208858-180209504	K562	blood:	n/a	n/a
11	CEBPB	chr5:180208882-180209430	K562	blood:	n/a	n/a
12	CEBPB	chr5:180209005-180209250	K562	blood:	n/a	n/a
13	CEBPD	chr5:180208780-180209396	K562	blood:	n/a	n/a
14	CEBPD	chr5:180208777-180209303	K562	blood:	n/a	n/a
15	CREB1	chr5:180144836-180145451	GM12878	blood:	n/a	n/a
16	CREB1	chr5:180144917-180145413	GM12878	blood:	n/a	n/a
17	CTCF	chr5:180209860-180210010	HepG2	liver:	n/a	n/a
18	CTCF	chr5:180145740-180145890	RPTEC	kidney:	n/a	n/a
19	CTCF	chr5:180145792-180146066	A549	lung:	n/a	n/a
20	CTCF	chr5:180194365-180194384	GM10248	blood:	n/a	n/a
21	CTCF	chr5:180145840-180145990	HUVEC	blood vessel:	n/a	n/a
22	CTCF	chr5:180145820-180145970	HCT-116	colon:	n/a	n/a
23	CTCF	chr5:180146260-180146410	GM12867	blood:	n/a	n/a
24	CTCF	chr5:180145860-180146010	HCM	heart:	n/a	n/a
25	CTCF	chr5:180145788-180146006	H1-hESC	embryonic stem cell:	n/a	n/a
26	CTCF	chr5:180146200-180146350	HMEC	breast:	n/a	n/a
27	CTCF	chr5:180145820-180145970	AG10803	skin:	n/a	n/a
28	CTCF	chr5:180145820-180145970	GM12875	blood:	n/a	n/a
29	CTCF	chr5:180145858-180145965	GM19239	blood:	n/a	n/a
30	CTCF	chr5:180145615-180146209	HCT-116	colon:	n/a	n/a
31	CTCF	chr5:180180440-180180590	HepG2	liver:	n/a	n/a
32	CTCF	chr5:180145876-180145984	NHEK	skin:	n/a	n/a
33	CTCF	chr5:180145810-180145980	A549	lung:	n/a	n/a
34	CTCF	chr5:180146205-180146218	K562	blood:	n/a	n/a
35	CTCF	chr5:180145820-180145970	HMEC	breast:	n/a	n/a
36	CTCF	chr5:180146240-180146390	NHLF	lung:	n/a	n/a
37	CTCF	chr5:180146100-180146250	AG09309	skin:	n/a	n/a
38	CTCF	chr5:180145820-180145970	HEK293	kidney:	n/a	n/a
39	CTCF	chr5:180145665-180146176	MCF-7	breast:	n/a	n/a
40	CTCF	chr5:180145820-180145970	SAEC	small airway:	n/a	n/a
41	CTCF	chr5:180145810-180146034	GM10266	blood:	n/a	n/a
42	CTCF	chr5:180145820-180145970	NB4	blood:	n/a	n/a
43	CTCF	chr5:180145810-180146053	Pancreas_OC	pancreas:	n/a	n/a
44	CTCF	chr5:180146200-180146350	HEK293	kidney:	n/a	n/a
45	CTCF	chr5:180146220-180146370	GM12865	blood:	n/a	n/a
46	CTCF	chr5:180145794-180146044	LNCaP	prostate:	n/a	n/a
47	CTCF	chr5:180145856-180145998	Fibrobl	skin:	n/a	n/a
48	CTCF	chr5:180147639-180147714	H1-hESC	embryonic stem cell:	n/a	n/a
49	CTCF	chr5:180145788-180146037	Medullo	brain:	n/a	n/a
50	CTCF	chr5:180145429-180145493	GM13977	blood:	n/a	n/a

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:180166492-180166542	ProgFib	skin:	n/a
2	chr5:180167724-180167774	K562	blood:	n/a
3	chr5:180167965-180168015	HCT-116	colon:	n/a
4	chr5:180166694-180166744	H1-hESC	embryonic stem cell:	embryo
5	chr5:180166694-180166744	Hepatocyte	liver:	n/a
6	chr5:180166694-180166744	RPTEC	kidney:	n/a
7	chr5:180167724-180167774	Hela-S3	cervix:	n/a
8	chr5:180167724-180167774	HEEpiC	esophagus:	n/a
9	chr5:180167724-180167774	H1-hESC	embryonic stem cell:	embryo
10	chr5:180167566-180167616	PFSK-1	brain:	n/a
11	chr5:180167724-180167774	HPAEpiC	pulmonary alveolar:	n/a
12	chr5:180167965-180168015	U87	brain:	n/a
13	chr5:180167965-180168015	HCM	heart:	n/a
14	chr5:180166694-180166744	HRE	kidney:	n/a
15	chr5:180167724-180167774	HEK293	kidney:	embryo
16	chr5:180166492-180166542	SAEC	small airway:	n/a
17	chr5:180166694-180166744	HEK293	kidney:	embryo
18	chr5:180167566-180167616	HCF	heart:	n/a
19	chr5:180167965-180168015	RPTEC	kidney:	n/a
20	chr5:180167132-180167182	GM12891	blood:	n/a
21	chr5:180166694-180166744	AG10803	skin:	n/a
22	chr5:180167724-180167774	HAEpiC	amniotic membrane:	n/a
23	chr5:180167566-180167616	AG09309	skin:	n/a
24	chr5:180166492-180166542	HNPCEpiC	eye:	n/a
25	chr5:180166694-180166744	SK-N-SH	brain:	n/a
26	chr5:180166694-180166744	HL-60	blood:	n/a
27	chr5:180167132-180167182	AG04449	skin:	fetal
28	chr5:180166492-180166542	AoSMC	blood vessel:	n/a
29	chr5:180166694-180166744	LNCaP	prostate:	n/a
30	chr5:180167965-180168015	SAEC	small airway:	n/a
31	chr5:180167132-180167182	Hela-S3	cervix:	n/a
32	chr5:180167566-180167616	ECC-1	luminal epithelium:	n/a
33	chr5:180167132-180167182	BE2_C	brain:	n/a
34	chr5:180167965-180168015	AG09319	gingival:	n/a
35	chr5:180167965-180168015	BJ	skin:	n/a
36	chr5:180167132-180167182	BJ	skin:	n/a
37	chr5:180167132-180167182	PANC-1	pancreas:	n/a
38	chr5:180166694-180166744	GM06990	blood:	n/a
39	chr5:180166492-180166542	HCF	heart:	n/a
40	chr5:180166492-180166542	AG09319	gingival:	n/a
41	chr5:180167965-180168015	K562	blood:	n/a
42	chr5:180167724-180167774	SK-N-SH	brain:	n/a
43	chr5:180167566-180167616	MCF-7	breast:	n/a
44	chr5:180167132-180167182	HAEpiC	amniotic membrane:	n/a
45	chr5:180167965-180168015	HUVEC	blood vessel:	n/a
46	chr5:180167724-180167774	PFSK-1	brain:	n/a
47	chr5:180166694-180166744	HAEpiC	amniotic membrane:	n/a
48	chr5:180167132-180167182	NB4	blood:	n/a
49	chr5:180167724-180167774	ovcar-3	ovarian:	n/a
50	chr5:180166492-180166542	HL-60	blood:	n/a

(count:34 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:180208714..180211260-chr5:180212096..180214924,3	K562	blood:
2	chr5:180171538..180174150-chr5:180179388..180180987,2	K562	blood:
3	chr5:180210430..180214631-chr5:180286463..180290673,6	MCF-7	breast:
4	chr5:180158275..180159905-chr5:180163258..180165205,2	K562	blood:
5	chr5:180168390..180170515-chr5:180204872..180207367,2	K562	blood:
6	chr5:180202113..180204208-chr5:180208493..180210882,2	K562	blood:
7	chr5:180147687..180149481-chr5:180151717..180153867,2	K562	blood:
8	chr5:180168390..180170515-chr5:180204872..180207367,2	K562	blood:
9	chr5:180146148..180147851-chr5:180235768..180238086,2	K562	blood:
10	chr5:180097643..180098351-chr5:180145367..180146387,3	MCF-7	breast:
11	chr5:180209019..180210957-chr5:180453882..180456380,2	K562	blood:
12	chr5:180202113..180204208-chr5:180208493..180210882,2	K562	blood:
13	chr5:180147687..180149481-chr5:180151717..180153867,2	K562	blood:
14	chr5:180202321..180205166-chr5:180643152..180645917,2	K562	blood:
15	chr5:180171538..180174150-chr5:180179388..180180987,2	K562	blood:
16	chr5:180037911..180038640-chr5:180145288..180145999,2	MCF-7	breast:
17	chr5:180170663..180173512-chr5:180175093..180176860,2	K562	blood:
18	chr5:180170663..180173512-chr5:180175093..180176860,2	K562	blood:
19	chr5:180130605..180132994-chr5:180134010..180136773,2	MCF-7	breast:
20	chr5:180207628..180210924-chr5:180228309..180230947,5	MCF-7	breast:
21	chr5:180210073..180212750-chr5:180649135..180651698,2	MCF-7	breast:
22	chr5:180136617..180138276-chr5:180153652..180155749,2	K562	blood:
23	chr5:180154735..180156600-chr5:180159240..180161653,2	MCF-7	breast:
24	chr5:180153993..180156519-chr5:180159947..180161759,2	K562	blood:
25	chr5:180158275..180159905-chr5:180163258..180165205,2	K562	blood:
26	chr5:180208930..180211085-chr5:180226767..180229407,2	K562	blood:
27	chr5:180136617..180138276-chr5:180153652..180155749,2	K562	blood:
28	chr5:180168086..180169925-chr5:180190599..180192805,2	K562	blood:
29	chr5:180172009..180174376-chr5:180240608..180243076,2	MCF-7	breast:
30	chr5:180153993..180156519-chr5:180159947..180161759,2	K562	blood:
31	chr5:180207548..180210211-chr5:180589188..180591545,3	K562	blood:
32	chr5:180168086..180169925-chr5:180190599..180192805,2	K562	blood:
33	chr5:180143140..180144948-chr5:180229622..180231793,2	K562	blood:
34	chr5:180208714..180211702-chr5:180212096..180213803,2	K562	blood:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-OR2Y1-2	chr5:180189565-180191201	ucscGeneNc_uc003mmj_1
2	lnc-BTNL8-8	chr5:180193918-180195284	ucscGeneNc_uc003mmk_2
3	lnc-BTNL8-8	chr5:180192279-180192466	ucscGeneNc_uc003mmk_2
4	lnc-BTNL8-8	chr5:180190563-180190835	ucscGeneNc_uc003mmk_2
5	lnc-OR2Y1-1	chr5:180155280-180155484	expReg_chr5_11028_-

No data

Variant related genes	Relation type
RNU1-17P	TF binding region
OR2Y1	TF binding region
RNU1-17P	CpG island
OR2Y1	CpG island
ENSG00000199892	chromatin interactions
ENSG00000264732	chromatin interactions
ENSG00000260841	chromatin interactions
ENSG00000196670	chromatin interactions
ENSG00000131446	chromatin interactions
ENSG00000146063	chromatin interactions

Extended variants
information (count: 1506 )
Associated
traits (count: 108 )

Variant overlapped rSNPs/rCNVs (count:1506 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10903266	chr5:180133616-180133617	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs188757956	chr5:180133637-180133638	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs181093590	chr5:180133645-180133646	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs185985169	chr5:180133677-180133678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs138309753	chr5:180133731-180133732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs559496070	chr5:180133737-180133738	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs546531853	chr5:180133807-180133808	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs551610730	chr5:180133820-180133821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs565151482	chr5:180133838-180133839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs530898108	chr5:180133854-180133855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs563067589	chr5:180133869-180133870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs56932815	chr5:180133875-180133876	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs567792594	chr5:180133889-180133890	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs374372802	chr5:180133898-180133899	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs546922589	chr5:180133920-180133921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs190984879	chr5:180133921-180133922	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs538981836	chr5:180133925-180133926	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs531849106	chr5:180133956-180133957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs542291922	chr5:180133976-180133977	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs114420330	chr5:180133984-180133985	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs536685679	chr5:180133986-180133987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs556530224	chr5:180133987-180133988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs562067733	chr5:180134054-180134055	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs542268934	chr5:180134068-180134069	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs375888951	chr5:180134078-180134079	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs182342724	chr5:180134079-180134080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs572959495	chr5:180134087-180134088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs142814438	chr5:180134088-180134089	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs527806657	chr5:180134089-180134090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs112142002	chr5:180134091-180134092	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs530808711	chr5:180134101-180134102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs551033679	chr5:180134114-180134115	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs146054148	chr5:180134131-180134132	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs376323979	chr5:180134132-180134133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs530218687	chr5:180134156-180134157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs547039680	chr5:180134164-180134165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs566976038	chr5:180134172-180134173	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs369596407	chr5:180134176-180134177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs576757014	chr5:180134184-180134185	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs539250696	chr5:180134185-180134186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs10074624	chr5:180134223-180134224	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs186180630	chr5:180134225-180134226	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs35916525	chr5:180134227-180134228	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs547352295	chr5:180134234-180134235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs556542347	chr5:180134255-180134256	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs573261632	chr5:180134266-180134267	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs190642451	chr5:180134279-180134280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs553004269	chr5:180134287-180134288	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs572827575	chr5:180134294-180134295	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs10068008	chr5:180134301-180134302	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:108)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	16751803	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Glioma	20126413	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Thyroid cancer	19087340	CNVD
Acute myeloid leukemia	20729466	CNVD
lymphocytic leukemia	21291569	CNVD
Multiple myeloma	17550852	CNVD
Salivary gland tumor	18059337	CNVD
Renal cell carcinoma	19377443	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Renal cell carcinoma	18592004	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Prostate cancer	18632612	CNVD
epilepsy	18472482	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Sotos syndrome	21572526	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Sotos syndrome	17561922	CNVD
Sotos syndrome	16773131	CNVD
Mental retardation	16773131	CNVD
Sotos syndrome	22470819	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Acute myeloid leukemia	18000384	CNVD
Sudden cardiac death	19188705	CNVD
Basal cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Olfactory neuroblastoma	18408657	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Lung cancer	17297452	CNVD
Cancer	20164920	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Sotos syndrome	22283845	CNVD
Breast cancer	16272173	CNVD
Sotos syndrome	20503325	CNVD
Lung adenocarcinoma	17086460	CNVD
Congenital Hypertrichosis Syndrome	21636067	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	19181860	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Ehlers-danlos syndrome	17576883	CNVD
Lung cancer	17086460	CNVD
Autism	19246517	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Autism	22543975	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Schizophrenia	23813976	CNVD
early-passage human iPS cells	21368824	CNVD
Cancer	17440070	CNVD
Schizophrenia	21346763	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Melanoma	20877625	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:118 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:180127200-180134800	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr5:180131600-180134800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr5:180131600-180134800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr5:180131600-180135000	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr5:180134800-180135200	Enhancers	H1 Cell Line	embryonic stem cell
6	chr5:180134800-180135200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr5:180134800-180137200	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr5:180134800-180138000	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr5:180135000-180135200	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr5:180135200-180135600	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr5:180135200-180137200	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr5:180135200-180137200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr5:180135200-180137400	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr5:180135600-180137400	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr5:180136000-180136200	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr5:180136200-180138200	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr5:180136400-180137400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr5:180137200-180137400	Active TSS	iPS-20b Cell Line	embryonic stem cell
19	chr5:180137200-180138000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
20	chr5:180137200-180138600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr5:180137400-180137600	Enhancers	H1 Cell Line	embryonic stem cell
22	chr5:180137400-180137600	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
23	chr5:180137400-180137800	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
24	chr5:180137400-180138000	Enhancers	ES-I3 Cell Line	embryonic stem cell
25	chr5:180137400-180138000	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr5:180137600-180139600	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr5:180137800-180138400	Enhancers	HUES48 Cell Line	embryonic stem cell
28	chr5:180138000-180140000	Enhancers	iPS-18 Cell Line	embryonic stem cell
29	chr5:180144600-180145400	Bivalent Enhancer	Primary T cells from cord blood	blood
30	chr5:180144600-180146600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
31	chr5:180144800-180146200	Enhancers	Primary T helper naive cells from peripheral blood	blood
32	chr5:180144800-180146200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
33	chr5:180144800-180146400	Enhancers	Primary T helper cells PMA-I stimulated	--
34	chr5:180144800-180146400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
35	chr5:180144800-180146400	Enhancers	Fetal Thymus	thymus
36	chr5:180144800-180146400	Enhancers	Dnd41	blood
37	chr5:180144800-180146800	Enhancers	GM12878-XiMat	blood
38	chr5:180145000-180146200	Enhancers	Primary T killer memory cells from peripheral blood	blood
39	chr5:180145200-180146200	Enhancers	Primary T helper cells fromperipheralblood	blood
40	chr5:180146000-180146200	Enhancers	Fetal Kidney	kidney
41	chr5:180146000-180146400	Enhancers	H1 Cell Line	embryonic stem cell
42	chr5:180146200-180147800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
43	chr5:180147600-180147800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr5:180147600-180147800	Enhancers	Fetal Thymus	thymus
45	chr5:180148000-180148200	Enhancers	Primary T helper naive cells from peripheral blood	blood
46	chr5:180150000-180150400	Active TSS	Spleen	Spleen
47	chr5:180151000-180151200	Enhancers	Dnd41	blood
48	chr5:180153200-180154000	Enhancers	Primary T cells from cord blood	blood
49	chr5:180153400-180153800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
50	chr5:180153400-180154000	Enhancers	Primary T helper naive cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links