Variant report

Variant	nsv517906
Chromosome Location	chr8:34661096-34669532
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 362 )
Associated
traits (count: 117 )

Variant overlapped rSNPs/rCNVs (count:362 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2685603	chr8:34661096-34661097	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs530063599	chr8:34661148-34661149	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs181031463	chr8:34661159-34661160	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs561034709	chr8:34661202-34661203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs531539304	chr8:34661204-34661205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs373764896	chr8:34661205-34661206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs2685602	chr8:34661254-34661255	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs570473424	chr8:34661260-34661261	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs538328790	chr8:34661288-34661289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs547188535	chr8:34661295-34661296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs537499681	chr8:34661301-34661302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs73576130	chr8:34661310-34661311	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs535881636	chr8:34661323-34661324	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs554593242	chr8:34661326-34661327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs528010332	chr8:34661328-34661329	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs576808529	chr8:34661358-34661359	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs187298627	chr8:34661368-34661369	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs61642213	chr8:34661383-34661384	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs528903763	chr8:34661386-34661387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs577530528	chr8:34661404-34661405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs541510193	chr8:34661427-34661428	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs370608107	chr8:34661434-34661435	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs374350016	chr8:34661517-34661518	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs559595578	chr8:34661519-34661520	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs113993201	chr8:34661523-34661524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs574735047	chr8:34661545-34661546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs141377777	chr8:34661546-34661547	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs35734669	chr8:34661560-34661561	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs113771386	chr8:34661574-34661575	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs375641246	chr8:34661611-34661612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs190494535	chr8:34661622-34661623	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs563748748	chr8:34661628-34661629	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs73671589	chr8:34661648-34661649	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs181952657	chr8:34661650-34661651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs564701165	chr8:34661673-34661674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs532195097	chr8:34661704-34661705	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs185730268	chr8:34661715-34661716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs565631596	chr8:34661775-34661776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs547040477	chr8:34661784-34661785	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs148908192	chr8:34661797-34661798	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs112149291	chr8:34661819-34661820	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs140705651	chr8:34661822-34661823	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs182378768	chr8:34661825-34661826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs537707373	chr8:34661830-34661831	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs143583630	chr8:34661927-34661928	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs370983518	chr8:34661944-34661945	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs2687548	chr8:34661961-34661962	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs2685601	chr8:34661971-34661972	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs553570558	chr8:34661997-34661998	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs552404525	chr8:34662064-34662065	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:117)

Disease	PMID	Source
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Colorectal cancer	16272173	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Multiple myeloma	16616336	CNVD
Melanoma	20688739	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	21806811	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hepatocellular carcinoma	16750200	CNVD
Bladder cancer	19088036	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	20459607	CNVD
Renal cell carcinoma	18765545	CNVD
Colorectal cancer	16912164	CNVD
Neuroticism	17667963	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	17001308	CNVD
Breast cancer	17157792	CNVD
Cancer	17001308	CNVD
Cancer	18840272	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	18382360	CNVD
Ductal carcinoma	18381933	CNVD
Breast cancer	21328542	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Intellectual disability	22045946	CNVD
Lung cancer	17925434	CNVD
Uveal melanoma	20484589	CNVD
Breast cancer	16608533	CNVD
Breast cancer	21364760	CNVD
Ewing''s sarcoma	17952124	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34657400-34663000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:34663000-34663200	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr8:34663200-34673000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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