Variant report

Variant	nsv518477
Chromosome Location	chr6:79700159-79850427
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1802)
CpG islands
(count:1283)
Chromatin interactive
region (count:142)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1802 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:79758443-79758593	K562	blood:	n/a	n/a
2	ARID3A	chr6:79798292-79798492	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:79747882-79748056	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:79763860-79763928	K562	blood:	n/a	n/a
5	ARID3A	chr6:79787796-79789130	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:79787980-79790015	K562	blood:	n/a	n/a
7	ARID3A	chr6:79785879-79787060	K562	blood:	n/a	chr6:79786434-79786450 chr6:79786435-79786451
8	ARID3A	chr6:79786574-79787086	HepG2	liver:	n/a	n/a
9	ATF1	chr6:79787882-79788609	K562	blood:	n/a	n/a
10	ATF1	chr6:79794433-79794633	K562	blood:	n/a	n/a
11	ATF1	chr6:79821427-79821567	K562	blood:	n/a	n/a
12	ATF1	chr6:79791466-79791689	K562	blood:	n/a	n/a
13	ATF2	chr6:79744467-79744938	GM12878	blood:	n/a	n/a
14	ATF2	chr6:79787696-79788797	GM12878	blood:	n/a	n/a
15	ATF2	chr6:79779886-79780423	GM12878	blood:	n/a	n/a
16	ATF2	chr6:79749772-79750117	GM12878	blood:	n/a	n/a
17	ATF2	chr6:79787761-79788749	GM12878	blood:	n/a	n/a
18	ATF2	chr6:79787781-79788183	H1-hESC	embryonic stem cell:	n/a	n/a
19	ATF2	chr6:79782402-79782936	GM12878	blood:	n/a	n/a
20	ATF2	chr6:79786619-79787074	GM12878	blood:	n/a	n/a
21	ATF2	chr6:79752115-79752615	GM12878	blood:	n/a	n/a
22	ATF2	chr6:79749673-79750282	GM12878	blood:	n/a	n/a
23	ATF2	chr6:79782316-79782849	GM12878	blood:	n/a	n/a
24	BACH1	chr6:79786788-79786970	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr6:79718377-79718449	K562	blood:	n/a	n/a
26	BACH1	chr6:79787848-79788777	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr6:79768361-79768363	K562	blood:	n/a	n/a
28	BACH1	chr6:79758317-79758687	K562	blood:	n/a	n/a
29	BACH1	chr6:79787886-79788612	K562	blood:	n/a	n/a
30	BACH1	chr6:79758324-79758720	H1-hESC	embryonic stem cell:	n/a	n/a
31	BATF	chr6:79744622-79744923	GM12878	blood:	n/a	n/a
32	BATF	chr6:79749835-79750113	GM12878	blood:	n/a	n/a
33	BATF	chr6:79752196-79752463	GM12878	blood:	n/a	chr6:79752363-79752372
34	BATF	chr6:79782569-79782809	GM12878	blood:	n/a	n/a
35	BATF	chr6:79788158-79788563	GM12878	blood:	n/a	n/a
36	BATF	chr6:79787841-79788097	GM12878	blood:	n/a	n/a
37	BATF	chr6:79782513-79782920	GM12878	blood:	n/a	n/a
38	BCL11A	chr6:79788198-79788601	GM12878	blood:	n/a	n/a
39	BCL11A	chr6:79749837-79750104	GM12878	blood:	n/a	n/a
40	BCL11A	chr6:79782471-79782847	GM12878	blood:	n/a	n/a
41	BCL3	chr6:79787745-79788775	A549	lung:	n/a	chr6:79787820-79787833 chr6:79787985-79787994 chr6:79788000-79788009
42	BCLAF1	chr6:79752159-79752620	GM12878	blood:	n/a	n/a
43	BCLAF1	chr6:79787634-79788755	GM12878	blood:	n/a	chr6:79787820-79787833 chr6:79787985-79787994 chr6:79787725-79787738 chr6:79788000-79788009 chr6:79787721-79787734 chr6:79787716-79787729
44	BCLAF1	chr6:79787828-79788379	K562	blood:	n/a	chr6:79787985-79787994 chr6:79788000-79788009
45	BCLAF1	chr6:79786541-79787064	GM12878	blood:	n/a	chr6:79786962-79786975 chr6:79786817-79786830 chr6:79786823-79786832 chr6:79786820-79786833
46	BCLAF1	chr6:79779972-79780529	GM12878	blood:	n/a	chr6:79780094-79780103
47	BCLAF1	chr6:79787741-79788657	GM12878	blood:	n/a	chr6:79787820-79787833 chr6:79787985-79787994 chr6:79788000-79788009
48	BCLAF1	chr6:79786508-79786930	GM12878	blood:	n/a	chr6:79786817-79786830 chr6:79786823-79786832 chr6:79786820-79786833
49	BHLHE40	chr6:79787645-79788678	K562	blood:	n/a	chr6:79788334-79788350
50	BHLHE40	chr6:79787734-79788924	GM12878	blood:	n/a	chr6:79788334-79788350

(count:1283 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:79788069-79788119	HPAEpiC	pulmonary alveolar:	n/a
2	chr6:79786963-79787013	AG09309	skin:	n/a
3	chr6:79788069-79788119	HPAEpiC	pulmonary alveolar:	n/a
4	chr6:79786963-79787013	AG09309	skin:	n/a
5	chr6:79792291-79792341	Hela-S3	cervix:	n/a
6	chr6:79785773-79785823	SAEC	small airway:	n/a
7	chr6:79788446-79788496	AG10803	skin:	n/a
8	chr6:79788099-79788149	NH-A	brain:	n/a
9	chr6:79765976-79766026	GM06990	blood:	n/a
10	chr6:79788063-79788113	HepG2	liver:	n/a
11	chr6:79785773-79785823	HRCEpiC	kidney:	n/a
12	chr6:79788069-79788119	AG10803	skin:	n/a
13	chr6:79788234-79788284	HIPEpiC	eye:	n/a
14	chr6:79788107-79788157	Hela-S3	cervix:	n/a
15	chr6:79787561-79787611	GM06990	blood:	n/a
16	chr6:79788069-79788119	NHDF-neo	bronchial:	n/a
17	chr6:79786675-79786725	SK-N-SH_RA	brain:	n/a
18	chr6:79758654-79758704	GM19239	blood:	n/a
19	chr6:79788573-79788623	HIPEpiC	eye:	n/a
20	chr6:79787561-79787611	HCT-116	colon:	n/a
21	chr6:79788573-79788623	K562	blood:	n/a
22	chr6:79792291-79792341	NHDF-neo	bronchial:	n/a
23	chr6:79788573-79788623	NHDF-neo	bronchial:	n/a
24	chr6:79787561-79787611	HCF	heart:	n/a
25	chr6:79787807-79787857	PANC-1	pancreas:	n/a
26	chr6:79788336-79788386	GM06990	blood:	n/a
27	chr6:79788061-79788111	PrEC	prostate:	n/a
28	chr6:79787698-79787748	HCT-116	colon:	n/a
29	chr6:79788573-79788623	HCPEpiC	choroid plexus:	n/a
30	chr6:79788076-79788126	HRCEpiC	kidney:	n/a
31	chr6:79787698-79787748	SAEC	small airway:	n/a
32	chr6:79758654-79758704	SK-N-MC	brain:	n/a
33	chr6:79788446-79788496	HCM	heart:	n/a
34	chr6:79788446-79788496	PFSK-1	brain:	n/a
35	chr6:79787561-79787611	BJ	skin:	n/a
36	chr6:79788234-79788284	HCF	heart:	n/a
37	chr6:79765976-79766026	Hela-S3	cervix:	n/a
38	chr6:79788099-79788149	SK-N-SH_RA	brain:	n/a
39	chr6:79788336-79788386	Jurkat	blood:	n/a
40	chr6:79787561-79787611	NT2-D1	testis:	n/a
41	chr6:79786675-79786725	Caco-2	colon:	n/a
42	chr6:79785773-79785823	HCT-116	colon:	n/a
43	chr6:79788481-79788531	Hela-S3	cervix:	n/a
44	chr6:79788061-79788111	RPTEC	kidney:	n/a
45	chr6:79788107-79788157	NB4	blood:	n/a
46	chr6:79792291-79792341	NHBE	bronchial:	n/a
47	chr6:79787698-79787748	HepG2	liver:	n/a
48	chr6:79788481-79788531	HPAEpiC	pulmonary alveolar:	n/a
49	chr6:79788502-79788552	HL-60	blood:	n/a
50	chr6:79786963-79787013	HCPEpiC	choroid plexus:	n/a

(count:142 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr6:79715998..79718423-chr6:79786608..79788657,2	K562	blood:
2	chr6:79802468..79803976-chr6:79804321..79807213,2	K562	blood:
3	chr6:79721662..79723988-chr6:79780005..79781950,2	K562	blood:
4	chr6:79780917..79783210-chr6:79805611..79807685,2	K562	blood:
5	chr6:79764144..79766429-chr6:79768254..79771136,3	K562	blood:
6	chr6:79813406..79815631-chr6:79824618..79827244,2	MCF-7	breast:
7	chr6:79762644..79765120-chr6:79785950..79787996,2	K562	blood:
8	chr6:79710026..79712564-chr6:79720572..79723552,2	K562	blood:
9	chr6:79789634..79791337-chr6:80176211..80178981,2	K562	blood:
10	chr6:79793555..79797386-chr6:79799912..79802613,3	K562	blood:
11	chr6:79780063..79782220-chr6:79942614..79944561,2	K562	blood:
12	chr6:79733598..79735343-chr6:79785922..79787786,2	MCF-7	breast:
13	chr19:47776842..47777558-chr6:79786410..79787079,2	Hela-S3	cervix:
14	chr6:79768855..79771844-chr6:79773378..79775039,2	K562	blood:
15	chr6:79736665..79739309-chr6:79785204..79787971,2	K562	blood:
16	chr3:155588737..155589548-chr6:79787120..79787910,2	Hela-S3	cervix:
17	chr6:79748247..79750934-chr6:79754578..79757318,2	K562	blood:
18	chr6:79720377..79723032-chr6:79723737..79726706,2	K562	blood:
19	chr6:79766914..79769296-chr6:79770475..79773266,2	K562	blood:
20	chr6:79764915..79767501-chr6:79771426..79773646,2	MCF-7	breast:
21	chr6:79757654..79762707-chr6:79762801..79766405,4	K562	blood:
22	chr6:79764144..79766429-chr6:79768254..79771136,3	K562	blood:
23	chr15:66584739..66585732-chr6:79786578..79787569,2	Hela-S3	cervix:
24	chr6:79757003..79760013-chr6:79760325..79763644,4	K562	blood:
25	chr6:79784764..79788097-chr6:80246158..80249987,4	MCF-7	breast:
26	chr20:46130306..46130939-chr6:79787773..79788663,2	MCF-7	breast:
27	chr6:79786661..79789498-chr6:79795729..79799585,7	MCF-7	breast:
28	chr6:79786321..79788665-chr6:79827363..79828888,2	MCF-7	breast:
29	chr6:79759623..79761788-chr6:79773682..79776640,2	K562	blood:
30	chr6:79757003..79760013-chr6:79760325..79763644,4	K562	blood:
31	chr6:79793555..79797386-chr6:79799912..79802613,3	K562	blood:
32	chr6:79793888..79796607-chr6:79798630..79801708,3	K562	blood:
33	chr6:79752412..79754559-chr6:79755981..79758600,2	K562	blood:
34	chr6:79800437..79802708-chr6:79814576..79817076,2	K562	blood:
35	chr6:79705477..79707613-chr6:79708103..79710185,2	K562	blood:
36	chr6:79815142..79817932-chr6:79824976..79828157,3	MCF-7	breast:
37	chr6:79785426..79789037-chr6:79798518..79801923,3	MCF-7	breast:
38	chr6:79802468..79803976-chr6:79804321..79807213,2	K562	blood:
39	chr6:79762969..79765630-chr6:79788155..79789824,2	MCF-7	breast:
40	chr6:79706595..79709353-chr6:79719320..79721938,2	K562	blood:
41	chr1:150208197..150208796-chr6:79787867..79788515,2	NB4	blood:
42	chr6:79786974..79789353-chr6:80246033..80249654,3	K562	blood:
43	chr6:79710026..79712564-chr6:79720572..79723552,2	K562	blood:
44	chr6:79764915..79767501-chr6:79771426..79773646,2	MCF-7	breast:
45	chr1:111505822..111506430-chr6:79787850..79788573,2	Hela-S3	cervix:
46	chr6:79712764..79715566-chr6:79719156..79721327,2	K562	blood:
47	chr6:79813406..79815631-chr6:79824618..79827244,2	MCF-7	breast:
48	chr6:79780063..79782941-chr6:79943061..79945739,2	K562	blood:
49	chr6:79757174..79759129-chr6:79777129..79780838,3	K562	blood:
50	chr6:79812794..79815583-chr6:79817631..79820610,3	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HMGN3-6	chr6:79777409-79777855	NONHSAT113676
2	lnc-IRAK1BP1-3	chr6:79787562-79790141	NONHSAT113677

No data

Variant related genes	Relation type
ENSG00000217512	TF binding region
PHIP	TF binding region
ENSG00000217512	CpG island
PHIP	CpG island
ENSG00000143401	chromatin interactions
ENSG00000111737	chromatin interactions
ENSG00000270362	chromatin interactions
ENSG00000146243	chromatin interactions
ENSG00000101040	chromatin interactions
ENSG00000135338	chromatin interactions
ENSG00000124151	chromatin interactions
ENSG00000217512	chromatin interactions
ENSG00000261318	chromatin interactions
ENSG00000203875	chromatin interactions
ENSG00000118418	chromatin interactions
ENSG00000267737	chromatin interactions
ENSG00000143333	chromatin interactions
ENSG00000156508	chromatin interactions
ENSG00000166938	chromatin interactions
ENSG00000184640	chromatin interactions
ENSG00000146247	chromatin interactions
ENSG00000254004	chromatin interactions
ENSG00000135486	chromatin interactions
ENSG00000228629	chromatin interactions
ENSG00000112701	chromatin interactions
ENSG00000273010	chromatin interactions

Extended variants
information (count: 4551 )
Associated
traits (count: 105 )

Variant overlapped rSNPs/rCNVs (count:4551 , 50 per page) page: 1 2 3 4 5 6 7 ... 92

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1415863	chr6:79700159-79700160	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs141495963	chr6:79700189-79700190	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs572618194	chr6:79700222-79700223	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs3818839	chr6:79700325-79700326	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs558195795	chr6:79700352-79700353	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs577961360	chr6:79700361-79700362	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs543847405	chr6:79700405-79700406	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs563725238	chr6:79700432-79700433	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs34665480	chr6:79700434-79700435	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs75024354	chr6:79700438-79700439	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs147039091	chr6:79700442-79700443	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs138190548	chr6:79700447-79700448	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs370090645	chr6:79700456-79700457	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs527520348	chr6:79700518-79700519	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs547664187	chr6:79700539-79700540	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs570700521	chr6:79700563-79700564	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs149171291	chr6:79700648-79700649	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs367594581	chr6:79700696-79700697	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs182237717	chr6:79700730-79700731	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs369385212	chr6:79700732-79700733	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs200061416	chr6:79700744-79700745	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs187336569	chr6:79700750-79700751	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs35828088	chr6:79700761-79700762	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs143305170	chr6:79700788-79700789	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs548840925	chr6:79700795-79700796	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs566243425	chr6:79700818-79700819	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs190018980	chr6:79700832-79700833	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs148030786	chr6:79700838-79700839	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs578189514	chr6:79700853-79700854	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs141756875	chr6:79700864-79700865	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs112016063	chr6:79700866-79700867	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs556074136	chr6:79700872-79700873	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs114458355	chr6:79700873-79700874	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs138762777	chr6:79700893-79700894	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs9359359	chr6:79700980-79700981	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs180871680	chr6:79701009-79701010	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs112185025	chr6:79701019-79701020	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs201744715	chr6:79701024-79701025	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs3841156	chr6:79701065-79701066	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs147346038	chr6:79701070-79701071	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs369618829	chr6:79701071-79701072	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs540880579	chr6:79701079-79701080	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs112330008	chr6:79701109-79701110	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs533081827	chr6:79701143-79701144	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs549332714	chr6:79701144-79701145	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs139054071	chr6:79701159-79701160	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs185127362	chr6:79701187-79701188	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs190286511	chr6:79701242-79701243	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs3841155	chr6:79701277-79701278	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs183137639	chr6:79701323-79701324	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:105)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Developmental delay	21147756	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Salivary gland tumor	18059337	CNVD
Lung cancer	16773561	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial cell carcinoma	18451213	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	20823134	CNVD
Ductal carcinoma	22052326	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:3041 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:79648800-79714400	Weak transcription	Gastric	stomach
2	chr6:79649000-79715200	Weak transcription	Stomach Mucosa	stomach
3	chr6:79659200-79702800	Weak transcription	Psoas Muscle	Psoas
4	chr6:79659400-79702400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr6:79659400-79707000	Weak transcription	Esophagus	oesophagus
6	chr6:79659600-79704000	Weak transcription	Lung	lung
7	chr6:79659600-79707000	Weak transcription	Spleen	Spleen
8	chr6:79659800-79702600	Weak transcription	Right Ventricle	heart
9	chr6:79659800-79703400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr6:79659800-79704000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr6:79659800-79707000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr6:79664200-79702400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr6:79669800-79707000	Weak transcription	Aorta	Aorta
14	chr6:79672800-79702600	Weak transcription	Placenta Amnion	Placenta Amnion
15	chr6:79675200-79702200	Weak transcription	Brain Angular Gyrus	brain
16	chr6:79675200-79704600	Weak transcription	Small Intestine	intestine
17	chr6:79675800-79706800	Weak transcription	NHEK	skin
18	chr6:79676000-79703600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
19	chr6:79679800-79702600	Weak transcription	Brain Cingulate Gyrus	brain
20	chr6:79680000-79702200	Weak transcription	Stomach Smooth Muscle	stomach
21	chr6:79687000-79709400	Strong transcription	Duodenum Mucosa	Duodenum
22	chr6:79687000-79714400	Strong transcription	Liver	Liver
23	chr6:79687000-79715800	Strong transcription	Primary T cells fromperipheralblood	blood
24	chr6:79687000-79715800	Strong transcription	Primary T helper cells fromperipheralblood	blood
25	chr6:79687000-79736000	Strong transcription	HUES6 Cell Line	embryonic stem cell
26	chr6:79687000-79736200	Strong transcription	Primary monocytes fromperipheralblood	blood
27	chr6:79687200-79701000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr6:79687200-79701000	Strong transcription	Adipose Nuclei	Adipose
29	chr6:79687200-79701200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr6:79687200-79702800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr6:79687200-79702800	Strong transcription	Primary hematopoietic stem cells	blood
32	chr6:79687200-79703000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr6:79687200-79703400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr6:79687200-79703400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr6:79687200-79709400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr6:79687200-79709400	Strong transcription	Fetal Intestine Large	intestine
37	chr6:79687200-79714400	Strong transcription	Duodenum Smooth Muscle	Duodenum
38	chr6:79687200-79714600	Strong transcription	H1 Cell Line	embryonic stem cell
39	chr6:79687200-79714600	Strong transcription	Rectal Mucosa Donor 29	rectum
40	chr6:79687200-79714800	Strong transcription	Rectal Mucosa Donor 31	rectum
41	chr6:79687200-79715000	Strong transcription	Primary neutrophils fromperipheralblood	blood
42	chr6:79687200-79715400	Strong transcription	Primary B cells from peripheral blood	blood
43	chr6:79687200-79715600	Strong transcription	Primary B cells from cord blood	blood
44	chr6:79687200-79715600	Strong transcription	Fetal Thymus	thymus
45	chr6:79687200-79716000	Strong transcription	Primary T helper cells PMA-I stimulated	--
46	chr6:79687200-79717600	Strong transcription	HUES48 Cell Line	embryonic stem cell
47	chr6:79687200-79735400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
48	chr6:79687200-79741600	Strong transcription	Monocytes-CD14+_RO01746	blood
49	chr6:79687600-79702400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr6:79687600-79718600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood

The 2.0 version of rSNPBase

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