Variant report

Variant	nsv518584
Chromosome Location	chr16:76356395-76367186
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 597 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:597 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6564316	chr16:76356395-76356396	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs186644847	chr16:76356421-76356422	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs141550412	chr16:76356450-76356451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs191441719	chr16:76356456-76356457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs559981769	chr16:76356461-76356462	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs74026706	chr16:76356479-76356480	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs551949592	chr16:76356480-76356481	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs150907151	chr16:76356563-76356564	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs115321467	chr16:76356571-76356572	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs538052916	chr16:76356627-76356628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs77019916	chr16:76356640-76356641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs75354295	chr16:76356641-76356642	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs72794950	chr16:76356648-76356649	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs6564317	chr16:76356661-76356662	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs374049998	chr16:76356718-76356719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs564524066	chr16:76356729-76356730	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs139658967	chr16:76356732-76356733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs35671026	chr16:76356741-76356742	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs397855225	chr16:76356751-76356752	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs553762028	chr16:76356779-76356780	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs142975515	chr16:76356805-76356806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs199611309	chr16:76356807-76356808	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs386792259	chr16:76356809-76356810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs6564319	chr16:76356810-76356811	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs374122933	chr16:76356835-76356836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs367661652	chr16:76356841-76356842	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs6564320	chr16:76356854-76356855	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs542414572	chr16:76356869-76356870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs115547799	chr16:76356878-76356879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs6564321	chr16:76356879-76356880	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs541052288	chr16:76356884-76356885	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs6564322	chr16:76356894-76356895	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs532265501	chr16:76356907-76356908	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs372798606	chr16:76356910-76356911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs531203491	chr16:76356934-76356935	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs560207457	chr16:76356945-76356946	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs545651917	chr16:76356954-76356955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs146205841	chr16:76357086-76357087	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs377048564	chr16:76357092-76357093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs531375122	chr16:76357096-76357097	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs191069807	chr16:76357099-76357100	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs182175387	chr16:76357104-76357105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs527406566	chr16:76357137-76357138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs547416682	chr16:76357165-76357166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs141419989	chr16:76357184-76357185	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs386385104	chr16:76357185-76357186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs34847610	chr16:76357186-76357187	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs80347492	chr16:76357187-76357188	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs570505778	chr16:76357229-76357230	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs554876198	chr16:76357238-76357239	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16702952	CNVD
Medulloblastoma	16968546	CNVD
Prostate cancer	19242612	CNVD
Cancer	22429812	CNVD
Ewing''s sarcoma	21437220	CNVD
Ewing''s sarcoma	22429812	CNVD
Melanoma	18172304	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Multiple myeloma	21628407	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	17001317	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17603634	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	17245344	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21806811	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Melanoma	22183965	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Poland''s syndrome	22110015	CNVD
Neuroblastoma	21899760	CNVD
Liver carcinoma	19366792	CNVD
Prostate cancer	21965145	CNVD
Cancer	21183584	CNVD
Ovarian cancer	20844748	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	19156837	CNVD
Acute myeloid leukemia	17377590	CNVD
Breast cancer	20409316	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	21509527	CNVD
Schizophrenia	23813976	CNVD
Lung cancer	24585490	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:76338400-76368600	Weak transcription	Brain Hippocampus Middle	brain
2	chr16:76342600-76368800	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr16:76344600-76368400	Weak transcription	Brain Substantia Nigra	brain
4	chr16:76360000-76360400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr16:76360200-76368400	Weak transcription	Brain Cingulate Gyrus	brain
6	chr16:76360400-76368600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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