Variant report

Variant nsv518888
Chromosome Location chr17:19789453-19804247
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:308 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19787400-19792800 Weak transcription Fetal Heart heart
2 chr17:19792800-19793400 Enhancers Fetal Heart heart
3 chr17:19793600-19794800 Enhancers Placenta Placenta
4 chr17:19793800-19794800 Enhancers Liver Liver
5 chr17:19794400-19794800 Enhancers Spleen Spleen
6 chr17:19794600-19794800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr17:19794800-19800000 Weak transcription Liver Liver
8 chr17:19794800-19800800 Weak transcription Spleen Spleen
9 chr17:19796200-19796400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr17:19796400-19809800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr17:19797600-19800400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr17:19797600-19800600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr17:19797800-19800400 Weak transcription Stomach Smooth Muscle stomach
14 chr17:19798000-19800400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr17:19798200-19798400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr17:19798200-19800800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr17:19798400-19804000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr17:19799200-19799400 Enhancers Thymus Thymus
19 chr17:19799200-19808400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr17:19799400-19803800 Weak transcription Thymus Thymus
21 chr17:19799400-19805000 Weak transcription Fetal Intestine Large intestine
22 chr17:19799600-19800600 Enhancers Primary neutrophils fromperipheralblood blood
23 chr17:19799600-19803800 Weak transcription Primary T cells from cord blood blood
24 chr17:19799800-19805200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr17:19799800-19806800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr17:19799800-19807000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr17:19800000-19800200 Enhancers Hela-S3 cervix
28 chr17:19800000-19800400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr17:19800000-19800800 Enhancers Liver Liver
30 chr17:19800000-19801600 Enhancers Fetal Heart heart
31 chr17:19800000-19802200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr17:19800200-19800400 Weak transcription NHLF lung
33 chr17:19800200-19801600 Enhancers Colon Smooth Muscle Colon
34 chr17:19800200-19802000 Enhancers A549 lung
35 chr17:19800200-19802200 Flanking Active TSS Hela-S3 cervix
36 chr17:19800200-19802200 Enhancers HSMMtube muscle
37 chr17:19800200-19804000 Weak transcription Primary T cells fromperipheralblood blood
38 chr17:19800400-19800600 Enhancers Primary mononuclear cells fromperipheralblood Blood
39 chr17:19800400-19800600 Enhancers Brain Angular Gyrus brain
40 chr17:19800400-19800600 Enhancers Monocytes-CD14+_RO01746 blood
41 chr17:19800400-19800800 Enhancers Skeletal Muscle Male skeletal muscle
42 chr17:19800400-19800800 Enhancers Skeletal Muscle Female skeletal muscle
43 chr17:19800400-19801000 Enhancers Primary monocytes fromperipheralblood blood
44 chr17:19800400-19801000 Enhancers Esophagus oesophagus
45 chr17:19800400-19801000 Enhancers Left Ventricle heart
46 chr17:19800400-19801000 Enhancers Pancreas Pancrea
47 chr17:19800400-19801200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr17:19800400-19801200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
49 chr17:19800400-19801200 Enhancers Rectal Mucosa Donor 31 rectum
50 chr17:19800400-19801400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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