Variant report

Variant	nsv519053
Chromosome Location	chr12:49065727-49079470
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:651)
CpG islands
(count:976)
Chromatin interactive
region (count:42)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:651 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:49069482-49069483	K562	blood:	n/a	n/a
2	ARID3A	chr12:49075682-49076445	HepG2	liver:	n/a	n/a
3	ARID3A	chr12:49075828-49076213	K562	blood:	n/a	n/a
4	ATF2	chr12:49075624-49076131	GM12878	blood:	n/a	n/a
5	ATF2	chr12:49075519-49076104	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr12:49075720-49076131	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr12:49075573-49076254	GM12878	blood:	n/a	n/a
8	ATF3	chr12:49075673-49076231	A549	lung:	n/a	n/a
9	BACH1	chr12:49075801-49075985	K562	blood:	n/a	n/a
10	BACH1	chr12:49075519-49075708	H1-hESC	embryonic stem cell:	n/a	n/a
11	BCL3	chr12:49075494-49076352	A549	lung:	n/a	chr12:49075550-49075563 chr12:49075998-49076011
12	BCL3	chr12:49075274-49076465	A549	lung:	n/a	chr12:49075550-49075563 chr12:49075998-49076011
13	BCLAF1	chr12:49075185-49076142	GM12878	blood:	n/a	chr12:49075550-49075563 chr12:49075998-49076011
14	BCLAF1	chr12:49075622-49076130	GM12878	blood:	n/a	chr12:49075998-49076011
15	BHLHE40	chr12:49075656-49076224	GM12878	blood:	n/a	n/a
16	BHLHE40	chr12:49075646-49076214	K562	blood:	n/a	n/a
17	BRCA1	chr12:49075827-49076180	GM12878	blood:	n/a	n/a
18	BRCA1	chr12:49075778-49076332	Hela-S3	cervix:	n/a	n/a
19	BRCA1	chr12:49075804-49076209	HepG2	liver:	n/a	n/a
20	CBX3	chr12:49075516-49076511	K562	blood:	n/a	n/a
21	CCNT2	chr12:49075569-49076272	K562	blood:	n/a	n/a
22	CEBPB	chr12:49075685-49076301	K562	blood:	n/a	chr12:49076073-49076081
23	CEBPB	chr12:49075848-49076260	HepG2	liver:	n/a	chr12:49076073-49076081
24	CEBPB	chr12:49071586-49071866	IMR90	lung:	n/a	n/a
25	CEBPB	chr12:49073180-49073484	Hela-S3	cervix:	n/a	chr12:49073346-49073357
26	CEBPB	chr12:49075941-49076239	K562	blood:	n/a	chr12:49076073-49076081
27	CEBPB	chr12:49075451-49076271	GM12878	blood:	n/a	chr12:49076073-49076081
28	CEBPB	chr12:49075828-49076339	Hela-S3	cervix:	n/a	chr12:49076073-49076081
29	CEBPD	chr12:49075702-49076234	K562	blood:	n/a	n/a
30	CEBPD	chr12:49075782-49076408	HepG2	liver:	n/a	n/a
31	CEBPD	chr12:49075811-49076072	HepG2	liver:	n/a	n/a
32	CHD1	chr12:49075043-49076041	H1-hESC	embryonic stem cell:	n/a	n/a
33	CHD1	chr12:49075079-49076305	IMR90	lung:	n/a	chr12:49076043-49076053
34	CHD1	chr12:49075588-49076068	GM12878	blood:	n/a	chr12:49076043-49076053
35	CHD2	chr12:49075499-49075561	Hela-S3	cervix:	n/a	n/a
36	CHD2	chr12:49075776-49076388	Hela-S3	cervix:	n/a	chr12:49076043-49076053
37	CHD2	chr12:49075717-49075737	HepG2	liver:	n/a	n/a
38	CHD2	chr12:49075942-49076207	HepG2	liver:	n/a	chr12:49076043-49076053
39	CHD2	chr12:49075622-49076400	GM12878	blood:	n/a	chr12:49076043-49076053
40	CHD2	chr12:49075714-49076296	H1-hESC	embryonic stem cell:	n/a	chr12:49076043-49076053
41	CHD2	chr12:49075696-49076295	K562	blood:	n/a	chr12:49076043-49076053
42	CREB1	chr12:49075396-49076463	GM12878	blood:	n/a	n/a
43	CREB1	chr12:49075416-49076529	HepG2	liver:	n/a	n/a
44	CREB1	chr12:49075888-49076223	A549	lung:	n/a	n/a
45	CREB1	chr12:49075592-49076415	A549	lung:	n/a	n/a
46	CREB1	chr12:49075771-49076385	ECC-1	luminal epithelium:	n/a	n/a
47	CTCF	chr12:49075840-49075990	SAEC	small airway:	n/a	n/a
48	CTCF	chr12:49075932-49076031	Lung_OC	lung:	n/a	n/a
49	CTCF	chr12:49075820-49075970	Caco-2	colon:	n/a	n/a
50	CTCF	chr12:49075981-49075984	GM12878	blood:	n/a	n/a

(count:976 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:49075221-49075271	NB4	blood:	n/a
2	chr12:49076058-49076108	HMEC	breast:	n/a
3	chr12:49076387-49076437	NHBE	bronchial:	n/a
4	chr12:49071788-49071838	U87	brain:	n/a
5	chr12:49076253-49076303	HL-60	blood:	n/a
6	chr12:49076253-49076303	HCT-116	colon:	n/a
7	chr12:49076300-49076350	HCT-116	colon:	n/a
8	chr12:49075643-49075693	HNPCEpiC	eye:	n/a
9	chr12:49075826-49075876	NH-A	brain:	n/a
10	chr12:49076162-49076212	NHDF-neo	bronchial:	n/a
11	chr12:49076084-49076134	PrEC	prostate:	n/a
12	chr12:49076300-49076350	AG10803	skin:	n/a
13	chr12:49076387-49076437	U87	brain:	n/a
14	chr12:49076084-49076134	HRE	kidney:	n/a
15	chr12:49076253-49076303	T-47D	breast:	n/a
16	chr12:49075538-49075588	U87	brain:	n/a
17	chr12:49076048-49076098	SKMC	muscle:	n/a
18	chr12:49076162-49076212	HCF	heart:	n/a
19	chr12:49076387-49076437	AG04449	skin:	fetal
20	chr12:49075643-49075693	CMK	blood:	n/a
21	chr12:49071788-49071838	ECC-1	luminal epithelium:	n/a
22	chr12:49076058-49076108	AG09309	skin:	n/a
23	chr12:49075826-49075876	HIPEpiC	eye:	n/a
24	chr12:49076203-49076253	Hela-S3	cervix:	n/a
25	chr12:49076048-49076098	HepG2	liver:	n/a
26	chr12:49075826-49075876	PANC-1	pancreas:	n/a
27	chr12:49076300-49076350	MCF10A-Er-Src	breast:	n/a
28	chr12:49076300-49076350	SKMC	muscle:	n/a
29	chr12:49076084-49076134	NHBE	bronchial:	n/a
30	chr12:49076084-49076134	ECC-1	luminal epithelium:	n/a
31	chr12:49076253-49076303	HIPEpiC	eye:	n/a
32	chr12:49075538-49075588	PrEC	prostate:	n/a
33	chr12:49075643-49075693	HEK293	kidney:	embryo
34	chr12:49075643-49075693	GM12878	blood:	n/a
35	chr12:49076300-49076350	AG04449	skin:	fetal
36	chr12:49076149-49076199	BE2_C	brain:	n/a
37	chr12:49074123-49074173	AG04449	skin:	fetal
38	chr12:49075826-49075876	Caco-2	colon:	n/a
39	chr12:49076048-49076098	U87	brain:	n/a
40	chr12:49076387-49076437	HAEpiC	amniotic membrane:	n/a
41	chr12:49075826-49075876	HNPCEpiC	eye:	n/a
42	chr12:49075221-49075271	GM12892	blood:	n/a
43	chr12:49076207-49076257	BJ	skin:	n/a
44	chr12:49075221-49075271	HPAEpiC	pulmonary alveolar:	n/a
45	chr12:49076207-49076257	A549	lung:	n/a
46	chr12:49075826-49075876	BJ	skin:	n/a
47	chr12:49076253-49076303	RPTEC	kidney:	n/a
48	chr12:49076203-49076253	SK-N-SH	brain:	n/a
49	chr12:49074123-49074173	Hepatocyte	liver:	n/a
50	chr12:49076162-49076212	PFSK-1	brain:	n/a

(count:42 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:117907595..117908581-chr12:49075347..49076268,2	MCF-7	breast:
2	chr12:49075418..49076068-chr3:36949235..36950020,2	NB4	blood:
3	chr12:49073439..49079132-chr12:49108039..49112179,15	K562	blood:
4	chr12:49071716..49073261-chr12:49207426..49209393,2	MCF-7	breast:
5	chr12:49075515..49076182-chr7:100209563..100210466,2	Hela-S3	cervix:
6	chr12:49075600..49076194-chr19:16940082..16940653,2	Hela-S3	cervix:
7	chr12:49059501..49061624-chr12:49071853..49074328,2	K562	blood:
8	chr12:49075486..49077748-chr12:49208337..49210735,3	K562	blood:
9	chr12:49078444..49081393-chr12:49097132..49098901,2	MCF-7	breast:
10	chr12:49079263..49083026-chr12:49101907..49104961,3	K562	blood:
11	chr12:49073658..49078597-chr12:49201352..49212442,12	MCF-7	breast:
12	chr12:49075559..49076382-chr9:130341183..130341702,2	Hela-S3	cervix:
13	chr1:211555799..211556573-chr12:49075458..49076102,2	Hela-S3	cervix:
14	chr12:49074245..49078609-chr12:49180778..49182867,4	MCF-7	breast:
15	chr12:49065590..49067167-chr12:49068340..49070785,2	K562	blood:
16	chr12:49072667..49077768-chr12:49107571..49112359,8	MCF-7	breast:
17	chr12:49075639..49076241-chr8:42195484..42196293,2	NB4	blood:
18	chr12:49063053..49065841-chr12:49108552..49110701,2	K562	blood:
19	chr12:49079308..49081077-chr12:49084026..49086019,2	MCF-7	breast:
20	chr12:49052650..49057544-chr12:49071692..49076123,6	K562	blood:
21	chr12:49066447..49069366-chr12:49075089..49076869,2	MCF-7	breast:
22	chr12:49074389..49076545-chr12:49180456..49183753,3	MCF-7	breast:
23	chr12:49072707..49077771-chr12:49103757..49111723,15	MCF-7	breast:
24	chr12:49075477..49077104-chr16:57653013..57654858,2	MCF-7	breast:
25	chr12:49052583..49059422-chr12:49071692..49076510,9	K562	blood:
26	chr12:49078551..49080628-chr12:49085549..49087501,2	MCF-7	breast:
27	chr12:49074430..49078671-chr12:49171491..49175460,5	MCF-7	breast:
28	chr12:49065590..49067167-chr12:49068340..49070785,2	K562	blood:
29	chr12:49075230..49077849-chr12:49244507..49246836,3	MCF-7	breast:
30	chr12:49073851..49077506-chr12:49084529..49091835,9	MCF-7	breast:
31	chr12:49075625..49076327-chr15:75917685..75918191,2	Hela-S3	cervix:
32	chr12:49079132..49081728-chr12:49082778..49085110,2	K562	blood:
33	chr12:48933826..48935713-chr12:49066983..49069233,2	MCF-7	breast:
34	chr12:49075682..49076266-chr17:26988965..26989517,2	Hela-S3	cervix:
35	chr12:49069459..49071260-chr12:49074212..49076184,2	MCF-7	breast:
36	chr12:49072639..49079132-chr12:49108469..49112073,12	K562	blood:
37	chr12:49075684..49076658-chr16:74808184..74809111,2	Hela-S3	cervix:
38	chr12:49071141..49073350-chr12:49108510..49110706,2	K562	blood:
39	chr12:49075769..49076744-chr17:56405737..56406693,2	NB4	blood:
40	chr12:49075650..49076266-chr5:72251743..72252318,2	Hela-S3	cervix:
41	chr12:49079263..49083026-chr12:49101684..49104961,3	K562	blood:
42	chr12:49049997..49051694-chr12:49071950..49074374,2	K562	blood:

No data

Variant related genes	Relation type
SNORA2B	TF binding region
KANSL2	TF binding region
SNORA2B	CpG island
KANSL2	CpG island
ENSG00000139620	chromatin interactions
ENSG00000265148	chromatin interactions
ENSG00000127511	chromatin interactions
ENSG00000169371	chromatin interactions
ENSG00000174233	chromatin interactions
ENSG00000168016	chromatin interactions
ENSG00000257660	chromatin interactions
ENSG00000153363	chromatin interactions
ENSG00000103089	chromatin interactions
ENSG00000174243	chromatin interactions
ENSG00000206612	chromatin interactions
ENSG00000205336	chromatin interactions
ENSG00000157107	chromatin interactions
ENSG00000129315	chromatin interactions
ENSG00000136830	chromatin interactions
ENSG00000005379	chromatin interactions
ENSG00000070501	chromatin interactions
ENSG00000167535	chromatin interactions
ENSG00000207313	chromatin interactions
ENSG00000132581	chromatin interactions
ENSG00000207467	chromatin interactions
ENSG00000109111	chromatin interactions
ENSG00000106330	chromatin interactions
ENSG00000271427	chromatin interactions

Extended variants
information (count: 566 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:566 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7303113	chr12:49065727-49065728	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs529672685	chr12:49065783-49065784	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs375988231	chr12:49065827-49065828	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs553026966	chr12:49065884-49065885	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
5	rs193297162	chr12:49065889-49065890	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
6	rs60638037	chr12:49065912-49065913	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
7	rs185457010	chr12:49065944-49065945	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
8	rs558476953	chr12:49065960-49065961	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
9	rs140947523	chr12:49065994-49065995	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
10	rs543693746	chr12:49066006-49066007	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs563482679	chr12:49066026-49066027	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs573759992	chr12:49066105-49066106	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs189586202	chr12:49066117-49066118	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs191138259	chr12:49066143-49066144	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs184063927	chr12:49066145-49066146	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs199744980	chr12:49066149-49066150	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs113533918	chr12:49066150-49066151	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs551501852	chr12:49066157-49066158	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs34025451	chr12:49066159-49066160	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs564854368	chr12:49066178-49066179	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs530462811	chr12:49066189-49066190	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs10622680	chr12:49066192-49066193	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs34556019	chr12:49066193-49066194	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs12424884	chr12:49066194-49066195	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs372159988	chr12:49066212-49066213	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
26	rs200878675	chr12:49066214-49066215	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
27	rs371918890	chr12:49066216-49066217	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
28	rs71080136	chr12:49066217-49066218	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
29	rs4760738	chr12:49066218-49066219	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
30	rs114122491	chr12:49066239-49066240	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
31	rs115128782	chr12:49066292-49066293	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
32	rs138530062	chr12:49066301-49066302	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
33	rs575180579	chr12:49066302-49066303	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
34	rs538706877	chr12:49066316-49066317	Strong transcription Weak transcription Genic enhancers	TF binding region	2 gene(s)	Overlapped CNVs	n/a
35	rs558667729	chr12:49066388-49066389	Strong transcription Weak transcription Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs576801693	chr12:49066468-49066469	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs575593207	chr12:49066487-49066488	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs542862795	chr12:49066530-49066531	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs557207210	chr12:49066541-49066542	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs201032909	chr12:49066550-49066551	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs541008016	chr12:49066551-49066552	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs74529390	chr12:49066561-49066562	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs76200369	chr12:49066562-49066563	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs368031328	chr12:49066566-49066567	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs112466156	chr12:49066574-49066575	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs187131483	chr12:49066582-49066583	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs140214206	chr12:49066628-49066629	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs111435623	chr12:49066695-49066696	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs71464917	chr12:49066730-49066731	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs71464918	chr12:49066749-49066750	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Neurodevelopmental disorder	22521361	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16272173	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	18632612	CNVD
Follicular lymphoma	20505157	CNVD
Hepatocellular carcinoma	16750200	CNVD
Melanoma	18172304	CNVD
Metanephric adenoma	20802469	CNVD
Glioblastoma multiforme	17387387	CNVD
liposarcomas	17372913	CNVD
Non-small cell lung cancer	24170126	CNVD
Cancer	16751803	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	16616336	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	17661082	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21785460	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Intracranial ependymoma	16609018	CNVD

Chromatin state (count:1024 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:49036800-49072000	Strong transcription	Liver	Liver
2	chr12:49037800-49072400	Strong transcription	Placenta	Placenta
3	chr12:49038200-49070800	Strong transcription	Monocytes-CD14+_RO01746	blood
4	chr12:49038800-49071800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr12:49039000-49072200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr12:49039400-49068800	Weak transcription	Right Atrium	heart
7	chr12:49039400-49071800	Strong transcription	HUES48 Cell Line	embryonic stem cell
8	chr12:49039800-49071000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr12:49039800-49071000	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr12:49040000-49072600	Strong transcription	HUES6 Cell Line	embryonic stem cell
11	chr12:49040400-49072800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr12:49041000-49071800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr12:49041200-49068200	Strong transcription	Stomach Smooth Muscle	stomach
14	chr12:49041800-49070800	Strong transcription	Primary T helper cells fromperipheralblood	blood
15	chr12:49041800-49071000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
16	chr12:49041800-49072400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr12:49041800-49073800	Strong transcription	Fetal Intestine Large	intestine
18	chr12:49042400-49072800	Strong transcription	Fetal Muscle Leg	muscle
19	chr12:49043800-49068800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr12:49044000-49068200	Strong transcription	Duodenum Mucosa	Duodenum
21	chr12:49044200-49071000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
22	chr12:49044200-49072400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
23	chr12:49044200-49072800	Strong transcription	Fetal Thymus	thymus
24	chr12:49044400-49071000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr12:49044400-49071400	Strong transcription	Thymus	Thymus
26	chr12:49044400-49072400	Strong transcription	HUES64 Cell Line	embryonic stem cell
27	chr12:49044600-49072400	Strong transcription	Rectal Mucosa Donor 29	rectum
28	chr12:49044800-49068000	Strong transcription	Primary T cells fromperipheralblood	blood
29	chr12:49044800-49071200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr12:49045000-49067600	Strong transcription	Left Ventricle	heart
31	chr12:49045000-49071600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr12:49045200-49068200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr12:49045200-49069400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr12:49045200-49070400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
35	chr12:49045400-49072600	Strong transcription	Primary B cells from peripheral blood	blood
36	chr12:49045600-49071800	Strong transcription	Rectal Mucosa Donor 31	rectum
37	chr12:49045600-49072400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr12:49045600-49073400	Strong transcription	H1 Cell Line	embryonic stem cell
39	chr12:49046200-49067400	Strong transcription	Primary T helper cells PMA-I stimulated	--
40	chr12:49046200-49072600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
41	chr12:49046400-49071000	Strong transcription	HUVEC	blood vessel
42	chr12:49046800-49069200	Strong transcription	Lung	lung
43	chr12:49047400-49069200	Strong transcription	Primary T helper naive cells from peripheral blood	blood
44	chr12:49055800-49070400	Strong transcription	Fetal Stomach	stomach
45	chr12:49057200-49072400	Strong transcription	Cortex derived primary cultured neurospheres	brain
46	chr12:49057600-49068400	Strong transcription	Primary neutrophils fromperipheralblood	blood
47	chr12:49057600-49069400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr12:49057600-49069800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
49	chr12:49057800-49066200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr12:49057800-49071400	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

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