Variant report

Variant	nsv519216
Chromosome Location	chr2:46683683-46723219
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1142)
CpG islands
(count:855)
Chromatin interactive
region (count:82)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1142 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr2:46708723-46709083	K562	blood:	n/a	n/a
2	ARID3A	chr2:46691709-46691923	HepG2	liver:	n/a	n/a
3	ARID3A	chr2:46688525-46688835	HepG2	liver:	n/a	n/a
4	ATF1	chr2:46708665-46709104	K562	blood:	n/a	n/a
5	ATF2	chr2:46720481-46721121	GM12878	blood:	n/a	n/a
6	ATF2	chr2:46717670-46718108	GM12878	blood:	n/a	n/a
7	ATF2	chr2:46720531-46721087	GM12878	blood:	n/a	n/a
8	ATF3	chr2:46714867-46715087	K562	blood:	n/a	n/a
9	BATF	chr2:46688997-46689375	GM12878	blood:	n/a	n/a
10	BATF	chr2:46720571-46721001	GM12878	blood:	n/a	n/a
11	BATF	chr2:46720540-46720967	GM12878	blood:	n/a	n/a
12	BCLAF1	chr2:46688470-46688935	GM12878	blood:	n/a	chr2:46688837-46688846
13	BCLAF1	chr2:46720475-46721012	GM12878	blood:	n/a	n/a
14	BHLHE40	chr2:46691705-46691936	K562	blood:	n/a	n/a
15	BHLHE40	chr2:46688450-46689156	K562	blood:	n/a	n/a
16	BHLHE40	chr2:46691638-46691962	HepG2	liver:	n/a	n/a
17	BHLHE40	chr2:46688449-46689277	GM12878	blood:	n/a	n/a
18	BHLHE40	chr2:46709062-46710009	GM12878	blood:	n/a	n/a
19	BHLHE40	chr2:46691659-46691963	GM12878	blood:	n/a	n/a
20	BHLHE40	chr2:46720623-46720994	GM12878	blood:	n/a	n/a
21	BHLHE40	chr2:46709622-46710013	HepG2	liver:	n/a	n/a
22	BRCA1	chr2:46688493-46688867	HepG2	liver:	n/a	n/a
23	BRCA1	chr2:46688250-46688854	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr2:46691645-46691883	HepG2	liver:	n/a	n/a
25	CBX3	chr2:46704602-46705028	K562	blood:	n/a	n/a
26	CBX3	chr2:46688479-46688885	K562	blood:	n/a	n/a
27	CEBPB	chr2:46708640-46709211	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr2:46691682-46691949	HepG2	liver:	n/a	n/a
29	CEBPB	chr2:46720690-46721063	Hela-S3	cervix:	n/a	n/a
30	CEBPB	chr2:46691697-46691965	K562	blood:	n/a	n/a
31	CEBPB	chr2:46720714-46721066	IMR90	lung:	n/a	n/a
32	CEBPB	chr2:46698907-46699063	A549	lung:	n/a	n/a
33	CEBPB	chr2:46719385-46719598	HepG2	liver:	n/a	chr2:46719482-46719493
34	CEBPB	chr2:46684963-46685225	A549	lung:	n/a	chr2:46685083-46685094
35	CEBPB	chr2:46698877-46699146	HepG2	liver:	n/a	n/a
36	CEBPB	chr2:46708603-46709107	IMR90	lung:	n/a	n/a
37	CEBPB	chr2:46719420-46719560	IMR90	lung:	n/a	chr2:46719482-46719493
38	CEBPB	chr2:46698876-46699120	Hela-S3	cervix:	n/a	n/a
39	CEBPB	chr2:46719420-46719542	K562	blood:	n/a	chr2:46719482-46719493
40	CEBPB	chr2:46715203-46715515	Hela-S3	cervix:	n/a	n/a
41	CEBPB	chr2:46691707-46691947	A549	lung:	n/a	n/a
42	CEBPB	chr2:46720773-46721024	A549	lung:	n/a	n/a
43	CEBPB	chr2:46684992-46685238	K562	blood:	n/a	chr2:46685083-46685094
44	CEBPB	chr2:46684939-46685235	HepG2	liver:	n/a	chr2:46685083-46685094
45	CEBPB	chr2:46691619-46691934	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr2:46684960-46685228	IMR90	lung:	n/a	chr2:46685083-46685094
47	CHD2	chr2:46720727-46720985	Hela-S3	cervix:	n/a	n/a
48	CHD2	chr2:46721966-46722006	GM12878	blood:	n/a	n/a
49	CHD2	chr2:46691632-46691826	HepG2	liver:	n/a	n/a
50	CHD2	chr2:46688574-46689395	GM12878	blood:	n/a	n/a

(count:855 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:46706139-46706189	NB4	blood:	n/a
2	chr2:46706139-46706189	NB4	blood:	n/a
3	chr2:46717839-46717889	PrEC	prostate:	n/a
4	chr2:46709125-46709175	GM12878	blood:	n/a
5	chr2:46717839-46717889	T-47D	breast:	n/a
6	chr2:46720801-46720851	HL-60	blood:	n/a
7	chr2:46706709-46706759	AG04450	lung:	fetal
8	chr2:46705350-46705400	NB4	blood:	n/a
9	chr2:46707626-46707676	HL-60	blood:	n/a
10	chr2:46707678-46707728	IMR90	lung:	fetal
11	chr2:46707678-46707728	SK-N-SH_RA	brain:	n/a
12	chr2:46706139-46706189	GM12891	blood:	n/a
13	chr2:46720801-46720851	SK-N-MC	brain:	n/a
14	chr2:46715231-46715281	HRPEpiC	eye:	n/a
15	chr2:46711337-46711387	NT2-D1	testis:	n/a
16	chr2:46707773-46707823	NHDF-neo	bronchial:	n/a
17	chr2:46705350-46705400	HCPEpiC	choroid plexus:	n/a
18	chr2:46711337-46711387	PANC-1	pancreas:	n/a
19	chr2:46711337-46711387	AG09309	skin:	n/a
20	chr2:46715231-46715281	SK-N-SH_RA	brain:	n/a
21	chr2:46707844-46707894	RPTEC	kidney:	n/a
22	chr2:46706709-46706759	GM12892	blood:	n/a
23	chr2:46709125-46709175	SKMC	muscle:	n/a
24	chr2:46711337-46711387	HCPEpiC	choroid plexus:	n/a
25	chr2:46715231-46715281	AG10803	skin:	n/a
26	chr2:46720801-46720851	HRCEpiC	kidney:	n/a
27	chr2:46706709-46706759	SK-N-SH_RA	brain:	n/a
28	chr2:46706139-46706189	PANC-1	pancreas:	n/a
29	chr2:46705989-46706039	HUVEC	blood vessel:	n/a
30	chr2:46706709-46706759	Caco-2	colon:	n/a
31	chr2:46689610-46689660	Caco-2	colon:	n/a
32	chr2:46706709-46706759	HCM	heart:	n/a
33	chr2:46707626-46707676	MCF10A-Er-Src	breast:	n/a
34	chr2:46707626-46707676	GM06990	blood:	n/a
35	chr2:46689610-46689660	HPAEpiC	pulmonary alveolar:	n/a
36	chr2:46711337-46711387	ovcar-3	ovarian:	n/a
37	chr2:46720801-46720851	PANC-1	pancreas:	n/a
38	chr2:46706709-46706759	PrEC	prostate:	n/a
39	chr2:46707678-46707728	MCF-7	breast:	n/a
40	chr2:46707678-46707728	AG04449	skin:	fetal
41	chr2:46720801-46720851	BE2_C	brain:	n/a
42	chr2:46705989-46706039	RPTEC	kidney:	n/a
43	chr2:46711337-46711387	H1-hESC	embryonic stem cell:	embryo
44	chr2:46705350-46705400	HRCEpiC	kidney:	n/a
45	chr2:46707773-46707823	MCF10A-Er-Src	breast:	n/a
46	chr2:46689610-46689660	GM12878	blood:	n/a
47	chr2:46707678-46707728	NHBE	bronchial:	n/a
48	chr2:46705350-46705400	Caco-2	colon:	n/a
49	chr2:46720801-46720851	SK-N-SH_RA	brain:	n/a
50	chr2:46707773-46707823	H1-hESC	embryonic stem cell:	embryo

(count:82 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr2:46709342..46712080-chr2:46908104..46909816,2	K562	blood:
2	chr2:46661594..46664052-chr2:46682018..46683894,2	K562	blood:
3	chr2:46456901..46457866-chr2:46688300..46689178,2	MCF-7	breast:
4	chr2:46690352..46691867-chr2:46842871..46845285,2	K562	blood:
5	chr2:46673194..46677108-chr2:46685172..46689084,4	MCF-7	breast:
6	chr2:46693043..46695866-chr2:46768148..46769721,2	MCF-7	breast:
7	chr2:46691367..46692063-chr2:46877281..46878815,4	MCF-7	breast:
8	chr2:46691531..46694095-chr2:46695293..46698690,3	K562	blood:
9	chr2:46591734..46592648-chr2:46688138..46688776,3	MCF-7	breast:
10	chr2:46561139..46561747-chr2:46688216..46688974,2	MCF-7	breast:
11	chr2:46672833..46675155-chr2:46688573..46690823,2	K562	blood:
12	chr2:46689398..46691303-chr2:46766550..46769344,2	MCF-7	breast:
13	chr2:46694609..46697439-chr2:46813750..46815810,2	MCF-7	breast:
14	chr2:46703332..46705552-chr2:46707048..46709063,2	K562	blood:
15	chr2:46290043..46290623-chr2:46688446..46689207,2	MCF-7	breast:
16	chr2:46712457..46718126-chr2:46724421..46727428,6	K562	blood:
17	chr2:46593059..46594102-chr2:46688159..46689154,5	MCF-7	breast:
18	chr2:46691364..46692337-chr2:46828238..46828952,3	K562	blood:
19	chr2:46691759..46692350-chr2:47003556..47004124,2	K562	blood:
20	chr2:46714508..46716993-chr2:46724518..46727090,2	K562	blood:
21	chr2:46237923..46238577-chr2:46688234..46688787,2	MCF-7	breast:
22	chr2:46636115..46638908-chr2:46687157..46689113,2	MCF-7	breast:
23	chr2:46691709..46692306-chr2:46768561..46769542,2	MCF-7	breast:
24	chr2:46721452..46724242-chr2:46727690..46730244,3	MCF-7	breast:
25	chr2:46237659..46238661-chr2:46688156..46689453,6	K562	blood:
26	chr2:46289850..46290391-chr2:46688641..46689585,2	K562	blood:
27	chr2:46688831..46694095-chr2:46695879..46699021,6	K562	blood:
28	chr2:46691531..46694095-chr2:46695293..46698690,3	K562	blood:
29	chr2:46690181..46690850-chr2:46829044..46829836,2	MCF-7	breast:
30	chr2:46707494..46710484-chr2:46718946..46721502,2	K562	blood:
31	chr2:46683036..46684677-chr2:46693619..46695195,2	K562	blood:
32	chr2:46681172..46682947-chr2:46683592..46685132,2	MCF-7	breast:
33	chr2:46703332..46705552-chr2:46707048..46709063,2	K562	blood:
34	chr2:46691412..46692513-chr2:47115934..47116752,3	MCF-7	breast:
35	chr2:46690029..46692779-chr2:46842870..46844853,2	MCF-7	breast:
36	chr2:46689308..46691938-chr2:46875674..46878193,3	MCF-7	breast:
37	chr2:46220268..46221206-chr2:46687774..46688837,4	K562	blood:
38	chr2:46713674..46717376-chr2:46717590..46719594,3	K562	blood:
39	chr2:46688652..46689180-chr2:46781896..46782657,2	K562	blood:
40	chr2:46656214..46657827-chr2:46704173..46707018,3	K562	blood:
41	chr2:46707494..46710484-chr2:46718946..46721502,2	K562	blood:
42	chr2:46616166..46617034-chr2:46688295..46689079,2	MCF-7	breast:
43	chr2:46688831..46694095-chr2:46695879..46699021,6	K562	blood:
44	chr2:46715260..46716783-chr2:46718663..46721578,2	MCF-7	breast:
45	chr2:46524557..46526648-chr2:46685519..46687325,2	MCF-7	breast:
46	chr2:46713674..46716471-chr2:46717649..46719594,2	K562	blood:
47	chr2:46690811..46691473-chr2:46877824..46878328,2	MCF-7	breast:
48	chr2:46691374..46692262-chr2:46827993..46829151,4	MCF-7	breast:
49	chr2:46593545..46595636-chr2:46687242..46688788,2	MCF-7	breast:
50	chr2:46616407..46617253-chr2:46687109..46688120,3	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC018682.6.1-1	chr2:46696141-46696182	NONHSAT070485
2	lnc-ATP6V1E2-5	chr2:46717889-46717970	NONHSAT070501

No data

Variant related genes	Relation type
ENSG00000253515	TF binding region
TMEM247	TF binding region
ENSG00000253515	CpG island
TMEM247	CpG island
ENSG00000232696	chromatin interactions
ENSG00000116016	chromatin interactions
ENSG00000119729	chromatin interactions
ENSG00000119878	chromatin interactions
ENSG00000253515	chromatin interactions
ENSG00000151665	chromatin interactions
ENSG00000241791	chromatin interactions
ENSG00000187600	chromatin interactions
ENSG00000250565	chromatin interactions

Extended variants
information (count: 1930 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:1930 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7565770	chr2:46683683-46683684	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs576433373	chr2:46683723-46683724	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs535843687	chr2:46683741-46683742	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs73929729	chr2:46683747-46683748	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs182316499	chr2:46683750-46683751	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs541326430	chr2:46683769-46683770	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs55768552	chr2:46683841-46683842	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs373090620	chr2:46683863-46683864	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs577896388	chr2:46683929-46683930	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs543217074	chr2:46683931-46683932	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs112713508	chr2:46684014-46684015	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs377235801	chr2:46684027-46684028	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs117271545	chr2:46684028-46684029	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs542648484	chr2:46684138-46684139	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs117531998	chr2:46684180-46684181	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs186641943	chr2:46684188-46684189	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs547670932	chr2:46684206-46684207	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs570778684	chr2:46684234-46684235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs533597413	chr2:46684268-46684269	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs567250280	chr2:46684269-46684270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs570141886	chr2:46684321-46684322	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs535566773	chr2:46684333-46684334	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs57823622	chr2:46684397-46684398	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs192577575	chr2:46684398-46684399	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs12471274	chr2:46684426-46684427	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs558098773	chr2:46684432-46684433	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs12474965	chr2:46684437-46684438	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs566514389	chr2:46684456-46684457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs374628862	chr2:46684475-46684476	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs185575396	chr2:46684486-46684487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs556869882	chr2:46684519-46684520	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs377030168	chr2:46684529-46684530	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs146632148	chr2:46684546-46684547	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs558960766	chr2:46684549-46684550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs538005041	chr2:46684557-46684558	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs574157604	chr2:46684586-46684587	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs140152860	chr2:46684654-46684655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs564445828	chr2:46684703-46684704	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs67960524	chr2:46684707-46684708	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs550388431	chr2:46684710-46684711	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs562611024	chr2:46684717-46684718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs570143718	chr2:46684735-46684736	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs529414095	chr2:46684760-46684761	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs143786783	chr2:46684774-46684775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs72873758	chr2:46684787-46684788	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs535037826	chr2:46684796-46684797	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs116426033	chr2:46684906-46684907	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs571559432	chr2:46684932-46684933	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs536945331	chr2:46684942-46684943	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs116436154	chr2:46685014-46685015	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Ependymoma	16718352	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Bladder cancer	21909424	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Medulloblastoma	20607354	CNVD
Leukemia	18628472	CNVD
Autism	22495311	CNVD
Autism	19521722	CNVD
Autism	18522746	CNVD
Non-small cell lung cancer	18927303	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16397240	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21508638	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Williams Syndrome	20824207	CNVD
Myelofibrosis	22110671	CNVD
Hypotonia	17579669	CNVD
Hypotonia-Cystinuria syndrome	16385448	CNVD
Glioblastoma multiforme	17002787	CNVD
Cystinuria	17625506	CNVD
Breast cancer	16272173	CNVD
Hereditary non-polyposis colorectal cancer	19566914	CNVD
Lung cancer	17297452	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Breast cancer	21364760	CNVD
Ovarian cancer	22355333	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Ovarian cancer	21781307	CNVD

Chromatin state (count:775 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:46667000-46688400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr2:46674600-46686600	Weak transcription	NHLF	lung
3	chr2:46679000-46683800	Weak transcription	Placenta	Placenta
4	chr2:46679000-46687400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr2:46679400-46685200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr2:46679600-46686400	Weak transcription	Right Atrium	heart
7	chr2:46680600-46687200	Weak transcription	Stomach Mucosa	stomach
8	chr2:46681400-46684800	Weak transcription	HepG2	liver
9	chr2:46682800-46686400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr2:46683600-46684000	Strong transcription	K562	blood
11	chr2:46683800-46684000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr2:46683800-46684000	Enhancers	Placenta	Placenta
13	chr2:46684000-46684200	Genic enhancers	Placenta	Placenta
14	chr2:46684000-46684200	ZNF genes & repeats	Pancreas	Pancrea
15	chr2:46684000-46688000	Weak transcription	K562	blood
16	chr2:46684200-46687000	Weak transcription	Pancreas	Pancrea
17	chr2:46684200-46687400	Weak transcription	Placenta	Placenta
18	chr2:46684800-46687600	Enhancers	HepG2	liver
19	chr2:46685200-46685400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr2:46685200-46685400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr2:46685200-46685600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr2:46685400-46686400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr2:46685600-46685800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr2:46685600-46685800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
25	chr2:46685600-46686600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr2:46685800-46686800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr2:46685800-46688400	Enhancers	Stomach Smooth Muscle	stomach
28	chr2:46685800-46688600	Enhancers	Fetal Stomach	stomach
29	chr2:46686000-46686200	Weak transcription	Left Ventricle	heart
30	chr2:46686000-46686200	Weak transcription	Rectal Smooth Muscle	rectum
31	chr2:46686000-46687200	Enhancers	Brain Cingulate Gyrus	brain
32	chr2:46686000-46687200	Enhancers	Brain Substantia Nigra	brain
33	chr2:46686000-46687400	Enhancers	Brain Anterior Caudate	brain
34	chr2:46686000-46687400	Enhancers	Brain Hippocampus Middle	brain
35	chr2:46686000-46687800	Enhancers	Fetal Kidney	kidney
36	chr2:46686000-46688200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
37	chr2:46686000-46688600	Enhancers	Fetal Lung	lung
38	chr2:46686000-46689000	Enhancers	Adipose Nuclei	Adipose
39	chr2:46686200-46686400	Enhancers	Colonic Mucosa	Colon
40	chr2:46686200-46686400	Enhancers	Left Ventricle	heart
41	chr2:46686200-46686400	Enhancers	Ovary	ovary
42	chr2:46686200-46686400	Enhancers	Rectal Smooth Muscle	rectum
43	chr2:46686200-46686400	Enhancers	Spleen	Spleen
44	chr2:46686200-46687200	Enhancers	Brain Angular Gyrus	brain
45	chr2:46686200-46687200	Enhancers	Brain Inferior Temporal Lobe	brain
46	chr2:46686200-46688600	Enhancers	Fetal Muscle Leg	muscle
47	chr2:46686200-46688800	Enhancers	Fetal Muscle Trunk	muscle
48	chr2:46686400-46687200	Weak transcription	Left Ventricle	heart
49	chr2:46686400-46687200	Weak transcription	Rectal Smooth Muscle	rectum
50	chr2:46686400-46687400	Weak transcription	Ovary	ovary

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