Variant report

Variant	nsv520602
Chromosome Location	chr3:88708334-88708914
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:26 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7638288	chr3:88708334-88708335	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs183256548	chr3:88708381-88708382	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs146684418	chr3:88708388-88708389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs72034576	chr3:88708389-88708390	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs60646214	chr3:88708398-88708399	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs559332635	chr3:88708401-88708402	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs188131080	chr3:88708405-88708406	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs373134102	chr3:88708483-88708484	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs191446739	chr3:88708498-88708499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs563469655	chr3:88708540-88708541	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs558559777	chr3:88708548-88708549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs576932626	chr3:88708552-88708553	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs59368275	chr3:88708588-88708589	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs7630627	chr3:88708607-88708608	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs529200872	chr3:88708642-88708643	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs554184651	chr3:88708709-88708710	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs71101613	chr3:88708711-88708712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs560978569	chr3:88708721-88708722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs528394502	chr3:88708749-88708750	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs75911927	chr3:88708834-88708835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs571258049	chr3:88708839-88708840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs538663553	chr3:88708844-88708845	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs147069694	chr3:88708893-88708894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs556061841	chr3:88708895-88708896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs560234335	chr3:88708899-88708900	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs1995015	chr3:88708914-88708915	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute myeloid leukemia	20729466	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Metanephric adenoma	20802469	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Soft tissue tumor	16732325	CNVD
small cell lung cancer	20016488	CNVD
Neurodevelopmental disorder	22521361	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
craniofacial dysmorphism	21918468	CNVD
Cancer	20164920	CNVD
Non-small cell lung cancer	21829676	CNVD
Lung cancer	19547694	CNVD
Cancer	20164919	CNVD
Acute myeloid leukemia	19651600	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:88689600-88709800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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