No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs3829749 |
chr2:179395760-179395761 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs377340289 |
chr2:179395772-179395773 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs199469665 |
chr2:179395811-179395812 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs55865284 |
chr2:179395813-179395814 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs573843615 |
chr2:179395826-179395827 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs532236466 |
chr2:179395829-179395830 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs200123047 |
chr2:179395852-179395853 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs372263729 |
chr2:179395860-179395861 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs55806007 |
chr2:179395874-179395875 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
10 |
rs538363206 |
chr2:179395875-179395876 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs554953169 |
chr2:179395893-179395894 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs568472002 |
chr2:179395912-179395913 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs368591364 |
chr2:179395913-179395914 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs534484592 |
chr2:179395919-179395920 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs371893623 |
chr2:179395924-179395925 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs200782068 |
chr2:179395926-179395927 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs368992068 |
chr2:179395930-179395931 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs554213990 |
chr2:179395935-179395936 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs372875128 |
chr2:179395936-179395937 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs3813250 |
chr2:179395958-179395959 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
21 |
rs369608299 |
chr2:179395970-179395971 |
Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs546048021 |
chr2:179396006-179396007 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs373073929 |
chr2:179396031-179396032 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs556741970 |
chr2:179396081-179396082 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs397517795 |
chr2:179396082-179396083 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs55938627 |
chr2:179396114-179396115 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
27 |
rs3813249 |
chr2:179396130-179396131 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs2857269 |
chr2:179396149-179396150 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs371075036 |
chr2:179396159-179396160 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs56308529 |
chr2:179396162-179396163 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs376175862 |
chr2:179396193-179396194 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs540500017 |
chr2:179396206-179396207 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs370137295 |
chr2:179396214-179396215 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs200378865 |
chr2:179396215-179396216 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs552058608 |
chr2:179396251-179396252 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs72629789 |
chr2:179396252-179396253 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs374678473 |
chr2:179396257-179396258 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs56001826 |
chr2:179396259-179396260 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs368779151 |
chr2:179396293-179396294 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs568460311 |
chr2:179396305-179396306 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs533966614 |
chr2:179396311-179396312 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs116876353 |
chr2:179396329-179396330 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs397517794 |
chr2:179396349-179396350 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs3829748 |
chr2:179396354-179396355 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
45 |
rs397517793 |
chr2:179396357-179396358 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs368945564 |
chr2:179396364-179396365 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs372312805 |
chr2:179396399-179396400 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs376634193 |
chr2:179396406-179396407 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs267599019 |
chr2:179396413-179396414 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs267599020 |
chr2:179396425-179396426 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|