Variant report

Variant nsv522255
Chromosome Location chr1:175827683-175849898
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:298 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175815800-175830400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:175822600-175829800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:175825400-175827800 Enhancers Fetal Brain Male brain
4 chr1:175825600-175827800 Enhancers Brain Cingulate Gyrus brain
5 chr1:175825600-175827800 Enhancers Brain Inferior Temporal Lobe brain
6 chr1:175825800-175827800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:175826600-175831800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:175827200-175830000 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr1:175827400-175827800 Enhancers Brain Anterior Caudate brain
10 chr1:175827400-175830400 Weak transcription H1 Cell Line embryonic stem cell
11 chr1:175827400-175830400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr1:175827400-175831000 Weak transcription Brain Germinal Matrix brain
13 chr1:175827400-175831600 Weak transcription Brain Angular Gyrus brain
14 chr1:175827400-175831600 Weak transcription Brain Hippocampus Middle brain
15 chr1:175827400-175831600 Weak transcription Brain Substantia Nigra brain
16 chr1:175827400-175832800 Weak transcription Fetal Brain Female brain
17 chr1:175827600-175832000 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:175827800-175831400 Weak transcription Brain Anterior Caudate brain
19 chr1:175827800-175831600 Weak transcription Brain Cingulate Gyrus brain
20 chr1:175827800-175831600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:175827800-175831800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:175827800-175831800 Weak transcription Fetal Brain Male brain
23 chr1:175828400-175831000 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr1:175828800-175829000 Enhancers Sigmoid Colon Sigmoid Colon
25 chr1:175828800-175830600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:175829200-175830400 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr1:175829800-175830800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:175829800-175830800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
29 chr1:175829800-175835000 Enhancers Fetal Intestine Large intestine
30 chr1:175830000-175830600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
31 chr1:175830200-175830600 Enhancers H9 Cell Line embryonic stem cell
32 chr1:175830400-175830600 Enhancers HUES6 Cell Line embryonic stem cell
33 chr1:175830400-175830800 Enhancers Sigmoid Colon Sigmoid Colon
34 chr1:175830400-175831000 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr1:175830400-175831000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:175830400-175831600 Enhancers H1 Cell Line embryonic stem cell
37 chr1:175830400-175832600 Enhancers Rectal Mucosa Donor 31 rectum
38 chr1:175830400-175834800 Enhancers Fetal Intestine Small intestine
39 chr1:175830600-175830800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:175830600-175831400 Enhancers GM12878-XiMat blood
41 chr1:175830600-175831600 Weak transcription H9 Cell Line embryonic stem cell
42 chr1:175830600-175831600 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr1:175830600-175831600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr1:175830600-175832600 Enhancers Rectal Mucosa Donor 29 rectum
45 chr1:175830800-175831600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr1:175830800-175831800 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:175830800-175832000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:175830800-175832200 Enhancers Duodenum Mucosa Duodenum
49 chr1:175830800-175833000 Enhancers HUES48 Cell Line embryonic stem cell
50 chr1:175830800-175834000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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