No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs12029680 |
chr1:47080741-47080742 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs149129109 |
chr1:47080749-47080750 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs563591134 |
chr1:47080754-47080755 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs373454329 |
chr1:47080780-47080781 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs531129868 |
chr1:47080789-47080790 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs150683373 |
chr1:47080911-47080912 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs374623875 |
chr1:47080956-47080957 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs549517813 |
chr1:47080968-47080969 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs7415243 |
chr1:47080972-47080973 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs35494693 |
chr1:47080983-47080984 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
11 |
rs181530264 |
chr1:47081034-47081035 |
Enhancers Weak transcription Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs111464029 |
chr1:47081070-47081071 |
Enhancers Weak transcription Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs372663879 |
chr1:47081112-47081113 |
Enhancers Weak transcription Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs80159866 |
chr1:47081119-47081120 |
Enhancers Weak transcription Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs6681420 |
chr1:47081137-47081138 |
Enhancers Weak transcription Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
16 |
rs117603111 |
chr1:47081157-47081158 |
Enhancers Weak transcription Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs147890167 |
chr1:47081199-47081200 |
Enhancers Weak transcription Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs560258535 |
chr1:47081254-47081255 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs141654491 |
chr1:47081274-47081275 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs147085297 |
chr1:47081334-47081335 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs541260679 |
chr1:47081364-47081365 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs559380235 |
chr1:47081372-47081373 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs187063957 |
chr1:47081378-47081379 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs371215352 |
chr1:47081517-47081518 |
Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs551193080 |
chr1:47081525-47081526 |
Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs191715717 |
chr1:47081566-47081567 |
Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs113524643 |
chr1:47081624-47081625 |
Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs563354715 |
chr1:47081630-47081631 |
Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs530966895 |
chr1:47081650-47081651 |
Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs549386409 |
chr1:47081723-47081724 |
Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs112840680 |
chr1:47081746-47081747 |
Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs183196731 |
chr1:47081752-47081753 |
Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs114160720 |
chr1:47081772-47081773 |
Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs113830724 |
chr1:47081815-47081816 |
Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs138510143 |
chr1:47081868-47081869 |
Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs551536547 |
chr1:47081886-47081887 |
Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs569529685 |
chr1:47081928-47081929 |
Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs28642145 |
chr1:47081971-47081972 |
Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs537096784 |
chr1:47081982-47081983 |
Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs377010737 |
chr1:47082013-47082014 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs369448769 |
chr1:47082065-47082066 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs112918665 |
chr1:47082079-47082080 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs567560787 |
chr1:47082098-47082099 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs537773133 |
chr1:47082101-47082102 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs534469862 |
chr1:47082117-47082118 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs386630905 |
chr1:47082136-47082137 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs189528964 |
chr1:47082137-47082138 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs545080649 |
chr1:47082181-47082182 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs377104913 |
chr1:47082195-47082196 |
Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs79038044 |
chr1:47082211-47082212 |
Bivalent/Poised TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|