Variant report

Variant	nsv522421
Chromosome Location	chr19:53413825-53433054
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:477)
CpG islands
(count:427)
Chromatin interactive
region (count:21)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:477 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:53427687-53427726	K562	blood:	n/a	n/a
2	ATF1	chr19:53427511-53427796	K562	blood:	n/a	n/a
3	ATF1	chr19:53426298-53426976	K562	blood:	n/a	n/a
4	ATF2	chr19:53426188-53426746	GM12878	blood:	n/a	n/a
5	ATF3	chr19:53427509-53427761	K562	blood:	n/a	n/a
6	BACH1	chr19:53426374-53426640	K562	blood:	n/a	n/a
7	BACH1	chr19:53426291-53426669	H1-hESC	embryonic stem cell:	n/a	n/a
8	BCL11A	chr19:53428812-53428959	GM12878	blood:	n/a	n/a
9	BCL3	chr19:53426498-53426869	GM12878	blood:	n/a	chr19:53426812-53426821 chr19:53426810-53426823
10	BCLAF1	chr19:53426282-53426729	GM12878	blood:	n/a	chr19:53426424-53426433
11	BHLHE40	chr19:53426214-53426710	K562	blood:	n/a	n/a
12	BHLHE40	chr19:53426291-53426835	GM12878	blood:	n/a	n/a
13	BHLHE40	chr19:53427608-53427722	K562	blood:	n/a	n/a
14	BRCA1	chr19:53426170-53426696	Hela-S3	cervix:	n/a	n/a
15	BRCA1	chr19:53426297-53426678	HepG2	liver:	n/a	n/a
16	BRCA1	chr19:53426334-53426571	GM12878	blood:	n/a	n/a
17	CBX3	chr19:53427433-53427925	K562	blood:	n/a	n/a
18	CBX3	chr19:53426096-53426809	K562	blood:	n/a	n/a
19	CCNT2	chr19:53426217-53426965	K562	blood:	n/a	n/a
20	CCNT2	chr19:53427516-53427800	K562	blood:	n/a	n/a
21	CEBPB	chr19:53427009-53427387	HepG2	liver:	n/a	chr19:53427191-53427202
22	CEBPB	chr19:53426302-53427395	Hela-S3	cervix:	n/a	chr19:53427191-53427202
23	CEBPB	chr19:53427031-53427282	K562	blood:	n/a	chr19:53427191-53427202
24	CEBPB	chr19:53427096-53427246	HepG2	liver:	n/a	chr19:53427191-53427202
25	CEBPB	chr19:53427022-53427356	IMR90	lung:	n/a	chr19:53427191-53427202
26	CEBPB	chr19:53427108-53427414	ECC-1	luminal epithelium:	n/a	chr19:53427191-53427202
27	CEBPB	chr19:53427010-53427373	H1-hESC	embryonic stem cell:	n/a	chr19:53427191-53427202
28	CEBPB	chr19:53427057-53427283	HepG2	liver:	n/a	chr19:53427191-53427202
29	CEBPB	chr19:53426991-53427679	K562	blood:	n/a	chr19:53427191-53427202
30	CEBPB	chr19:53426868-53427409	K562	blood:	n/a	chr19:53427191-53427202
31	CEBPB	chr19:53426972-53427395	ECC-1	luminal epithelium:	n/a	chr19:53427191-53427202
32	CEBPD	chr19:53426440-53426723	HepG2	liver:	n/a	n/a
33	CEBPD	chr19:53426419-53426783	K562	blood:	n/a	n/a
34	CHD1	chr19:53426356-53426863	GM12878	blood:	n/a	n/a
35	CHD2	chr19:53426212-53426706	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD2	chr19:53426156-53426733	HepG2	liver:	n/a	n/a
37	CHD2	chr19:53426123-53426972	GM12878	blood:	n/a	n/a
38	CHD2	chr19:53426046-53426680	K562	blood:	n/a	n/a
39	CHD2	chr19:53426136-53426837	Hela-S3	cervix:	n/a	n/a
40	CREB1	chr19:53426141-53426908	K562	blood:	n/a	n/a
41	CREB1	chr19:53426038-53426973	HepG2	liver:	n/a	n/a
42	CREB1	chr19:53426120-53426927	H1-hESC	embryonic stem cell:	n/a	n/a
43	CTCF	chr19:53426608-53426868	GM12878	blood:	n/a	n/a
44	CTCF	chr19:53427581-53427675	Lung_OC	lung:	n/a	n/a
45	CTCF	chr19:53432633-53432682	LNCaP	prostate:	n/a	n/a
46	CTCF	chr19:53427505-53427693	K562	blood:	n/a	n/a
47	CTCF	chr19:53426260-53426410	HBMEC	blood vessel:	n/a	n/a
48	CTCF	chr19:53426380-53426530	GM12878	blood:	n/a	n/a
49	CTCF	chr19:53427141-53427798	K562	blood:	n/a	n/a
50	CTCF	chr19:53426197-53426676	K562	blood:	n/a	n/a

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53429005-53429055	HCPEpiC	choroid plexus:	n/a
2	chr19:53429005-53429055	ProgFib	skin:	n/a
3	chr19:53426233-53426283	AG09319	gingival:	n/a
4	chr19:53424670-53424720	AG10803	skin:	n/a
5	chr19:53426388-53426438	PrEC	prostate:	n/a
6	chr19:53426233-53426283	U87	brain:	n/a
7	chr19:53429005-53429055	NB4	blood:	n/a
8	chr19:53426388-53426438	HIPEpiC	eye:	n/a
9	chr19:53426388-53426438	T-47D	breast:	n/a
10	chr19:53424670-53424720	PANC-1	pancreas:	n/a
11	chr19:53426802-53426852	MCF10A-Er-Src	breast:	n/a
12	chr19:53430697-53430747	NT2-D1	testis:	n/a
13	chr19:53426233-53426283	CMK	blood:	n/a
14	chr19:53430697-53430747	ProgFib	skin:	n/a
15	chr19:53426233-53426283	HPAEpiC	pulmonary alveolar:	n/a
16	chr19:53430697-53430747	NH-A	brain:	n/a
17	chr19:53426388-53426438	HPAEpiC	pulmonary alveolar:	n/a
18	chr19:53429005-53429055	HRCEpiC	kidney:	n/a
19	chr19:53430697-53430747	LNCaP	prostate:	n/a
20	chr19:53426388-53426438	HCM	heart:	n/a
21	chr19:53426802-53426852	HCF	heart:	n/a
22	chr19:53426802-53426852	Hepatocyte	liver:	n/a
23	chr19:53429005-53429055	CMK	blood:	n/a
24	chr19:53429005-53429055	Hepatocyte	liver:	n/a
25	chr19:53426233-53426283	GM06990	blood:	n/a
26	chr19:53426802-53426852	HRE	kidney:	n/a
27	chr19:53424670-53424720	K562	blood:	n/a
28	chr19:53432372-53432422	NH-A	brain:	n/a
29	chr19:53432372-53432422	AG04450	lung:	fetal
30	chr19:53426388-53426438	GM12892	blood:	n/a
31	chr19:53426802-53426852	NT2-D1	testis:	n/a
32	chr19:53426233-53426283	IMR90	lung:	fetal
33	chr19:53432372-53432422	GM12891	blood:	n/a
34	chr19:53426233-53426283	MCF-7	breast:	n/a
35	chr19:53424670-53424720	SK-N-MC	brain:	n/a
36	chr19:53426233-53426283	AG04450	lung:	fetal
37	chr19:53432372-53432422	ECC-1	luminal epithelium:	n/a
38	chr19:53426388-53426438	HNPCEpiC	eye:	n/a
39	chr19:53426802-53426852	AG04450	lung:	fetal
40	chr19:53426233-53426283	SK-N-SH	brain:	n/a
41	chr19:53426233-53426283	HUVEC	blood vessel:	n/a
42	chr19:53432372-53432422	SK-N-SH_RA	brain:	n/a
43	chr19:53429005-53429055	SK-N-MC	brain:	n/a
44	chr19:53426233-53426283	RPTEC	kidney:	n/a
45	chr19:53432372-53432422	SK-N-SH	brain:	n/a
46	chr19:53426233-53426283	SK-N-MC	brain:	n/a
47	chr19:53432372-53432422	AG10803	skin:	n/a
48	chr19:53430697-53430747	Jurkat	blood:	n/a
49	chr19:53426388-53426438	SK-N-SH_RA	brain:	n/a
50	chr19:53426802-53426852	LNCaP	prostate:	n/a

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:53424975..53429001-chr19:53430174..53432512,3	K562	blood:
2	chr19:53390480..53393412-chr19:53415932..53418277,2	K562	blood:
3	chr19:53425636..53428538-chr19:53430721..53433929,3	K562	blood:
4	chr19:53431907..53434266-chr19:53444043..53446544,2	K562	blood:
5	chr19:53426133..53428140-chr19:53445241..53446971,2	K562	blood:
6	chr11:62608903..62609637-chr19:53426135..53426686,2	Hela-S3	cervix:
7	chr19:53426133..53428640-chr19:53444456..53447019,4	K562	blood:
8	chr19:53359564..53361265-chr19:53424872..53426783,2	MCF-7	breast:
9	chr19:53424791..53427731-chr19:53464365..53467863,4	K562	blood:
10	chr19:53424714..53426568-chr19:53443432..53446550,3	MCF-7	breast:
11	chr19:53399381..53402083-chr19:53412934..53414945,2	K562	blood:
12	chr19:53418400..53422745-chr19:53423096..53427800,7	K562	blood:
13	chr19:53419869..53422803-chr19:53423217..53426977,4	K562	blood:
14	chr19:53399773..53402425-chr19:53424830..53427617,2	MCF-7	breast:
15	chr19:53418400..53422745-chr19:53423096..53427800,7	K562	blood:
16	chr19:53398338..53401958-chr19:53425181..53428572,6	K562	blood:
17	chr19:53425636..53428538-chr19:53430721..53433929,3	K562	blood:
18	chr19:53398490..53401733-chr19:53415760..53419901,4	K562	blood:
19	chr19:53398338..53403121-chr19:53425170..53428184,6	K562	blood:
20	chr19:53412333..53414642-chr19:53425536..53427807,2	K562	blood:
21	chr19:53419869..53422803-chr19:53423217..53426977,4	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-VN1R2-12	chr19:53426635-53426717	ENSG00000269646.1
2	lnc-VN1R2-12	chr19:53426926-53427328	ENSG00000269646.1
3	lnc-ZNF816-1	chr19:53430388-53432667	NR_037805

No data

Variant related genes	Relation type
ENSG00000269646	TF binding region
ZNF888	TF binding region
ZNF816-ZNF321P	TF binding region
ENSG00000269646	CpG island
ZNF888	CpG island
ZNF816-ZNF321P	CpG island
ENSG00000180257	chromatin interactions
ENSG00000213801	chromatin interactions
ENSG00000213793	chromatin interactions
ENSG00000221874	chromatin interactions
ENSG00000182986	chromatin interactions
ENSG00000198538	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000269646	chromatin interactions
ENSG00000204604	chromatin interactions

Extended variants
information (count: 1007 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:1007 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1978616	chr19:53413825-53413826	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs566955701	chr19:53413889-53413890	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs534194940	chr19:53413928-53413929	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs552466797	chr19:53413952-53413953	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs570844348	chr19:53413953-53413954	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs368107242	chr19:53413960-53413961	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs147008928	chr19:53413966-53413967	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs566516209	chr19:53413967-53413968	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs556331963	chr19:53413968-53413969	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs574868774	chr19:53413969-53413970	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs138232017	chr19:53413971-53413972	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs553882734	chr19:53413999-53414000	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs572290700	chr19:53414001-53414002	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs190281397	chr19:53414005-53414006	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs143376627	chr19:53414018-53414019	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs10402041	chr19:53414050-53414051	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs543402508	chr19:53414060-53414061	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs561568430	chr19:53414079-53414080	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs551993274	chr19:53414119-53414120	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs181104951	chr19:53414160-53414161	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs547198531	chr19:53414233-53414234	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs8100613	chr19:53414282-53414283	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs527863960	chr19:53414285-53414286	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs552382335	chr19:53414379-53414380	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs570809416	chr19:53414396-53414397	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs28693728	chr19:53414398-53414399	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs550111131	chr19:53414453-53414454	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs568364151	chr19:53414491-53414492	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs535913485	chr19:53414512-53414513	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs535257674	chr19:53414541-53414542	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs566209896	chr19:53414555-53414556	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs386810605	chr19:53414584-53414585	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs28693789	chr19:53414585-53414586	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs7246502	chr19:53414590-53414591	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs200448605	chr19:53414596-53414597	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs79115201	chr19:53414597-53414598	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs543360178	chr19:53414616-53414617	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs28695724	chr19:53414622-53414623	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs372955713	chr19:53414631-53414632	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs573572123	chr19:53414654-53414655	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs572904104	chr19:53414668-53414669	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs541055938	chr19:53414669-53414670	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs185195427	chr19:53414676-53414677	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs28690522	chr19:53414684-53414685	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
45	rs375200403	chr19:53414736-53414737	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs189765435	chr19:53414737-53414738	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs182702402	chr19:53414741-53414742	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs564352203	chr19:53414779-53414780	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs531986949	chr19:53414780-53414781	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs149275854	chr19:53414795-53414796	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Adrenocortical carcinoma	18281524	CNVD
early-passage human iPS cells	21368824	CNVD
Melanoma	20877625	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1059 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53401000-53425600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr19:53401400-53425600	Weak transcription	NHDF-Ad	bronchial
3	chr19:53401400-53425800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr19:53401600-53419000	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr19:53401600-53419200	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr19:53401600-53425600	Weak transcription	Brain Hippocampus Middle	brain
7	chr19:53401600-53425600	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr19:53401600-53426000	Weak transcription	Brain Substantia Nigra	brain
9	chr19:53401800-53421200	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr19:53401800-53425600	Weak transcription	Stomach Smooth Muscle	stomach
11	chr19:53401800-53426000	Weak transcription	Brain Angular Gyrus	brain
12	chr19:53401800-53426000	Weak transcription	Right Ventricle	heart
13	chr19:53402000-53425800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr19:53402000-53425800	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr19:53405800-53416200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr19:53407600-53414000	Weak transcription	Pancreas	Pancrea
17	chr19:53408800-53421400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr19:53409200-53414600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
19	chr19:53409200-53414800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr19:53409200-53414800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr19:53409200-53415000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr19:53409200-53415000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
23	chr19:53409400-53420800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr19:53409600-53418000	Weak transcription	NH-A	brain
25	chr19:53409600-53425600	Weak transcription	Fetal Kidney	kidney
26	chr19:53410000-53415400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr19:53410000-53418000	Strong transcription	Primary hematopoietic stem cells	blood
28	chr19:53410000-53421400	Strong transcription	Rectal Mucosa Donor 31	rectum
29	chr19:53410400-53425400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
30	chr19:53410600-53414600	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
31	chr19:53410800-53415800	Weak transcription	NHEK	skin
32	chr19:53410800-53425000	Weak transcription	Stomach Mucosa	stomach
33	chr19:53410800-53425000	Weak transcription	HepG2	liver
34	chr19:53410800-53425800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr19:53411000-53414000	Weak transcription	Fetal Muscle Leg	muscle
36	chr19:53411200-53415800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr19:53411200-53417600	Weak transcription	Placenta Amnion	Placenta Amnion
38	chr19:53411400-53415200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
39	chr19:53411400-53415800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr19:53411400-53416600	Weak transcription	Left Ventricle	heart
41	chr19:53411400-53416800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
42	chr19:53411400-53417600	Weak transcription	HUES48 Cell Line	embryonic stem cell
43	chr19:53411400-53418600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
44	chr19:53411400-53425600	Weak transcription	H1 Cell Line	embryonic stem cell
45	chr19:53411400-53425600	Weak transcription	Fetal Muscle Trunk	muscle
46	chr19:53411400-53425600	Weak transcription	Rectal Smooth Muscle	rectum
47	chr19:53411400-53425600	Weak transcription	HUVEC	blood vessel
48	chr19:53411400-53425800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr19:53411400-53425800	Weak transcription	Brain Anterior Caudate	brain
50	chr19:53411400-53426000	Weak transcription	HSMM	muscle

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