Variant report

Variant	nsv522457
Chromosome Location	chr6:5245070-5260936
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr6:5260289-5260755	K562	blood:	n/a	n/a
2	ATF2	chr6:5260895-5261306	GM12878	blood:	n/a	n/a
3	BACH1	chr6:5260460-5260597	K562	blood:	n/a	n/a
4	BCLAF1	chr6:5260883-5262029	GM12878	blood:	n/a	chr6:5261161-5261174 chr6:5261219-5261228
5	BCLAF1	chr6:5260846-5261939	K562	blood:	n/a	chr6:5261161-5261174 chr6:5261219-5261228
6	BCLAF1	chr6:5260878-5261204	GM12878	blood:	n/a	chr6:5261161-5261174
7	BHLHE40	chr6:5257581-5257583	HepG2	liver:	n/a	n/a
8	BHLHE40	chr6:5260488-5262021	GM12878	blood:	n/a	n/a
9	BHLHE40	chr6:5260525-5261965	HepG2	liver:	n/a	n/a
10	BHLHE40	chr6:5260250-5261962	K562	blood:	n/a	n/a
11	CBX3	chr6:5260876-5261973	K562	blood:	n/a	n/a
12	CBX3	chr6:5260175-5260795	K562	blood:	n/a	n/a
13	CCNT2	chr6:5260604-5261898	K562	blood:	n/a	chr6:5261508-5261517
14	CEBPB	chr6:5259619-5259937	K562	blood:	n/a	n/a
15	CEBPB	chr6:5260195-5260779	Hela-S3	cervix:	n/a	n/a
16	CEBPB	chr6:5260230-5260680	K562	blood:	n/a	n/a
17	CEBPB	chr6:5260240-5260633	K562	blood:	n/a	n/a
18	CEBPB	chr6:5259463-5259515	HepG2	liver:	n/a	chr6:5259469-5259480
19	CEBPB	chr6:5252731-5252951	HepG2	liver:	n/a	chr6:5252798-5252809
20	CEBPD	chr6:5260848-5261745	HepG2	liver:	n/a	n/a
21	CHD2	chr6:5260565-5261768	HepG2	liver:	n/a	chr6:5261506-5261516 chr6:5261223-5261233
22	CHD2	chr6:5260290-5260672	K562	blood:	n/a	n/a
23	CHD2	chr6:5260270-5262012	Hela-S3	cervix:	n/a	chr6:5261506-5261516 chr6:5261223-5261233 chr6:5261880-5261890
24	CHD2	chr6:5245910-5245918	HepG2	liver:	n/a	n/a
25	CREB1	chr6:5260293-5262056	GM12878	blood:	n/a	n/a
26	CREB1	chr6:5260922-5261915	K562	blood:	n/a	n/a
27	CREB1	chr6:5260315-5262106	HepG2	liver:	n/a	n/a
28	CTCF	chr6:5251327-5251413	GM12878	blood:	n/a	chr6:5251346-5251367
29	CTCF	chr6:5251297-5251408	Hela-S3	cervix:	n/a	chr6:5251346-5251367
30	CTCF	chr6:5251260-5251410	HMEC	breast:	n/a	chr6:5251346-5251367
31	CTCF	chr6:5260380-5260530	HepG2	liver:	n/a	n/a
32	CTCF	chr6:5260620-5260770	WERI-Rb-1	eye:	n/a	n/a
33	CTCF	chr6:5260342-5260734	K562	blood:	n/a	n/a
34	CTCF	chr6:5251260-5251410	AG04449	skin:	n/a	chr6:5251346-5251367
35	CTCF	chr6:5251320-5251470	HRPEpiC	eye:	n/a	chr6:5251346-5251367
36	CTCF	chr6:5260514-5260732	GM12878	blood:	n/a	n/a
37	CTCF	chr6:5251356-5251362	K562	blood:	n/a	n/a
38	CTCF	chr6:5251333-5251414	HUVEC	blood vessel:	n/a	chr6:5251346-5251367
39	CTCF	chr6:5260300-5260450	GM12873	blood:	n/a	n/a
40	CTCF	chr6:5251240-5251390	HMEC	breast:	n/a	chr6:5251346-5251367
41	CTCF	chr6:5260420-5260570	GM12873	blood:	n/a	n/a
42	CTCF	chr6:5251262-5251453	IMR90	lung:	n/a	chr6:5251346-5251367
43	CTCF	chr6:5260580-5260730	GM06990	blood:	n/a	n/a
44	CTCF	chr6:5260380-5260530	HEK293	kidney:	n/a	n/a
45	CTCF	chr6:5260400-5260550	HRPEpiC	eye:	n/a	n/a
46	CUX1	chr6:5245647-5245681	K562	blood:	n/a	n/a
47	CUX1	chr6:5260268-5260602	K562	blood:	n/a	n/a
48	E2F6	chr6:5260639-5260773	K562	blood:	n/a	n/a
49	EBF1	chr6:5260568-5261050	GM12878	blood:	n/a	chr6:5260795-5260804 chr6:5260793-5260806
50	EGR1	chr6:5260914-5262050	K562	blood:	n/a	chr6:5261783-5261807 chr6:5261237-5261250 chr6:5261920-5261942 chr6:5261237-5261250 chr6:5261237-5261247 chr6:5261930-5261937 chr6:5261927-5261936 chr6:5261777-5261786 chr6:5261237-5261250 chr6:5261234-5261248 chr6:5261236-5261250 chr6:5261156-5261169 chr6:5261238-5261247 chr6:5261237-5261250 chr6:5261191-5261205 chr6:5261285-5261295

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:5260664-5260714	HEK293	kidney:	embryo
2	chr6:5260664-5260714	HEK293	kidney:	embryo
3	chr6:5260664-5260714	K562	blood:	n/a
4	chr6:5260664-5260714	Caco-2	colon:	n/a
5	chr6:5260664-5260714	NHBE	bronchial:	n/a
6	chr6:5260664-5260714	HCPEpiC	choroid plexus:	n/a
7	chr6:5258521-5258571	SKMC	muscle:	n/a
8	chr6:5258521-5258571	A549	lung:	n/a
9	chr6:5260664-5260714	SKMC	muscle:	n/a
10	chr6:5258521-5258571	Hela-S3	cervix:	n/a
11	chr6:5258521-5258571	AG09319	gingival:	n/a
12	chr6:5258521-5258571	HCM	heart:	n/a
13	chr6:5260664-5260714	LNCaP	prostate:	n/a
14	chr6:5260664-5260714	HIPEpiC	eye:	n/a
15	chr6:5258521-5258571	AG10803	skin:	n/a
16	chr6:5260664-5260714	AG09309	skin:	n/a
17	chr6:5260664-5260714	AG09319	gingival:	n/a
18	chr6:5260664-5260714	SK-N-MC	brain:	n/a
19	chr6:5260664-5260714	GM12892	blood:	n/a
20	chr6:5258521-5258571	HCT-116	colon:	n/a
21	chr6:5260664-5260714	PFSK-1	brain:	n/a
22	chr6:5260664-5260714	Hepatocyte	liver:	n/a
23	chr6:5258521-5258571	PANC-1	pancreas:	n/a
24	chr6:5258521-5258571	SK-N-MC	brain:	n/a
25	chr6:5260664-5260714	NHDF-neo	bronchial:	n/a
26	chr6:5260664-5260714	CMK	blood:	n/a
27	chr6:5260664-5260714	NB4	blood:	n/a
28	chr6:5260664-5260714	AG04449	skin:	fetal
29	chr6:5258521-5258571	NH-A	brain:	n/a
30	chr6:5260664-5260714	IMR90	lung:	fetal
31	chr6:5258521-5258571	ProgFib	skin:	n/a
32	chr6:5260664-5260714	AG10803	skin:	n/a
33	chr6:5260664-5260714	HL-60	blood:	n/a
34	chr6:5258521-5258571	HNPCEpiC	eye:	n/a
35	chr6:5258521-5258571	MCF10A-Er-Src	breast:	n/a
36	chr6:5260664-5260714	HRPEpiC	eye:	n/a
37	chr6:5258521-5258571	MCF-7	breast:	n/a
38	chr6:5260664-5260714	H1-hESC	embryonic stem cell:	embryo
39	chr6:5260664-5260714	GM06990	blood:	n/a
40	chr6:5260664-5260714	GM12878	blood:	n/a
41	chr6:5260664-5260714	T-47D	breast:	n/a
42	chr6:5258521-5258571	RPTEC	kidney:	n/a
43	chr6:5260664-5260714	HCT-116	colon:	n/a
44	chr6:5260664-5260714	NH-A	brain:	n/a
45	chr6:5260664-5260714	HEEpiC	esophagus:	n/a
46	chr6:5260664-5260714	NT2-D1	testis:	n/a
47	chr6:5258521-5258571	HMEC	breast:	n/a
48	chr6:5258521-5258571	HL-60	blood:	n/a
49	chr6:5258521-5258571	BE2_C	brain:	n/a
50	chr6:5258521-5258571	NHDF-neo	bronchial:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:5243071..5246983-chr6:5247269..5251044,4	MCF-7	breast:
2	chr6:5254535..5257442-chr6:5259369..5261994,2	MCF-7	breast:
3	chr6:5230476..5232022-chr6:5258422..5260596,2	MCF-7	breast:
4	chr6:5244206..5246671-chr6:5260247..5262061,2	MCF-7	breast:
5	chr6:5219149..5221377-chr6:5248567..5251892,3	K562	blood:
6	chr1:27020570..27021504-chr6:5260610..5261174,2	Hela-S3	cervix:
7	chr6:5230386..5232263-chr6:5256966..5259626,3	K562	blood:
8	chr1:150038831..150039716-chr6:5260490..5261436,2	Hela-S3	cervix:
9	chr6:5244069..5246030-chr6:5250865..5252776,2	K562	blood:
10	chr6:5243071..5246983-chr6:5247269..5251044,4	MCF-7	breast:
11	chr3:195808872..195809382-chr6:5260583..5261415,2	Hela-S3	cervix:
12	chr6:5237216..5240073-chr6:5242175..5245334,3	K562	blood:
13	chr6:5235833..5237389-chr6:5249976..5252772,2	K562	blood:
14	chr6:5255894..5257705-chr6:5381224..5383041,2	K562	blood:
15	chr6:5244069..5246030-chr6:5250865..5252776,2	K562	blood:
16	chr6:5258576..5260130-chr6:5278247..5279774,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RPP40-5	chr6:5260881-5260954	NONHSAT107516

Variant related genes	Relation type
LYRM4	TF binding region
FARS2	TF binding region
LYRM4	CpG island
FARS2	CpG island
ENSG00000136631	chromatin interactions
ENSG00000214113	chromatin interactions
ENSG00000072274	chromatin interactions
ENSG00000260063	chromatin interactions
ENSG00000145982	chromatin interactions

Extended variants
information (count: 682 )
Associated
traits (count: 98 )

Variant overlapped rSNPs/rCNVs (count:682 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2145372	chr6:5245070-5245071	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs529563689	chr6:5245086-5245087	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs146042995	chr6:5245090-5245091	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs146170345	chr6:5245091-5245092	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs7753884	chr6:5245113-5245114	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs7753895	chr6:5245131-5245132	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs79307948	chr6:5245184-5245185	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs73718006	chr6:5245245-5245246	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs192042974	chr6:5245248-5245249	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs534504390	chr6:5245263-5245264	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs534486055	chr6:5245268-5245269	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs557657351	chr6:5245286-5245287	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs138404832	chr6:5245318-5245319	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs71540855	chr6:5245323-5245324	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs13205428	chr6:5245344-5245345	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs2753225	chr6:5245346-5245347	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs70974183	chr6:5245347-5245348	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs2753226	chr6:5245348-5245349	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs182871852	chr6:5245394-5245395	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs187213951	chr6:5245396-5245397	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs201917234	chr6:5245411-5245412	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs574559608	chr6:5245475-5245476	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs535697179	chr6:5245476-5245477	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs111507483	chr6:5245527-5245528	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs370036810	chr6:5245547-5245548	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs546262125	chr6:5245552-5245553	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs564557949	chr6:5245571-5245572	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs573403471	chr6:5245594-5245595	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs572252472	chr6:5245624-5245625	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs75040246	chr6:5245627-5245628	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs373850153	chr6:5245648-5245649	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs562275251	chr6:5245692-5245693	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs62385047	chr6:5245720-5245721	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs551252175	chr6:5245732-5245733	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs563078535	chr6:5245734-5245735	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs530409562	chr6:5245748-5245749	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs551782343	chr6:5245749-5245750	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs570133777	chr6:5245787-5245788	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs143029751	chr6:5245851-5245852	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs112776089	chr6:5245923-5245924	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs546385037	chr6:5245983-5245984	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs556492712	chr6:5245988-5245989	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs576470263	chr6:5246011-5246012	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs115665523	chr6:5246041-5246042	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs146157176	chr6:5246042-5246043	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs371835516	chr6:5246044-5246045	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs140021842	chr6:5246058-5246059	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs539822540	chr6:5246080-5246081	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs558157965	chr6:5246081-5246082	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs542349547	chr6:5246097-5246098	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:98)

Disease	PMID	Source
Developmental delay	19490664	CNVD
Cancer	21183584	CNVD
Multiple Epiphyseal Dysplasia	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Glaucoma	18694899	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Cancer	20164920	CNVD
Colorectal cancer	21297112	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Myelodysplastic syndrome	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Ewing''s sarcoma	17952124	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
Autism	22495311	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
small cell lung cancer	20016488	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
dysmorphism	22105932	CNVD
psychomotor delay	22105932	CNVD
Ovarian cancer	19193619	CNVD
Osteosarcoma	16790693	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21364760	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:718 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:5206200-5246800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
2	chr6:5208200-5259800	Weak transcription	Primary B cells from peripheral blood	blood
3	chr6:5214600-5248800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:5214800-5248800	Weak transcription	A549	lung
5	chr6:5215000-5252600	Weak transcription	Stomach Smooth Muscle	stomach
6	chr6:5215000-5257400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr6:5215000-5259800	Weak transcription	Primary T cells fromperipheralblood	blood
8	chr6:5215400-5259800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr6:5215600-5251600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr6:5215600-5254600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr6:5215600-5259800	Weak transcription	NHDF-Ad	bronchial
12	chr6:5215800-5251200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr6:5216200-5251400	Weak transcription	Fetal Brain Female	brain
14	chr6:5216400-5259600	Weak transcription	Primary T helper cells PMA-I stimulated	--
15	chr6:5216600-5259600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr6:5220000-5245600	Weak transcription	HMEC	breast
17	chr6:5220800-5259600	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr6:5222400-5253800	Weak transcription	Dnd41	blood
19	chr6:5227800-5259800	Weak transcription	Rectal Mucosa Donor 29	rectum
20	chr6:5230000-5245800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr6:5230200-5246400	Weak transcription	Fetal Lung	lung
22	chr6:5231000-5249400	Weak transcription	HSMMtube	muscle
23	chr6:5231000-5260200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
24	chr6:5231200-5249800	Weak transcription	HSMM	muscle
25	chr6:5231400-5245600	Weak transcription	NH-A	brain
26	chr6:5231400-5250000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr6:5231600-5249200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr6:5231800-5259800	Weak transcription	Skeletal Muscle Male	skeletal muscle
29	chr6:5231800-5260000	Weak transcription	NHLF	lung
30	chr6:5231800-5260200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
31	chr6:5232000-5259800	Weak transcription	HUVEC	blood vessel
32	chr6:5232000-5260200	Weak transcription	H9 Cell Line	embryonic stem cell
33	chr6:5232400-5260000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr6:5232800-5253600	Weak transcription	Psoas Muscle	Psoas
35	chr6:5233200-5246800	Weak transcription	Brain Substantia Nigra	brain
36	chr6:5233400-5259800	Weak transcription	Brain Angular Gyrus	brain
37	chr6:5233400-5259800	Weak transcription	Brain Cingulate Gyrus	brain
38	chr6:5233400-5259800	Weak transcription	Brain Hippocampus Middle	brain
39	chr6:5233600-5254200	Weak transcription	Ovary	ovary
40	chr6:5233800-5253800	Weak transcription	Rectal Smooth Muscle	rectum
41	chr6:5234200-5257400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr6:5235200-5259400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr6:5235200-5259800	Weak transcription	Adipose Nuclei	Adipose
44	chr6:5235600-5259800	Weak transcription	Primary monocytes fromperipheralblood	blood
45	chr6:5235800-5259800	Weak transcription	Rectal Mucosa Donor 31	rectum
46	chr6:5236200-5254000	Weak transcription	Hela-S3	cervix
47	chr6:5236400-5249800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr6:5236400-5259600	Weak transcription	Fetal Intestine Large	intestine
49	chr6:5236400-5260200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
50	chr6:5236600-5248600	Weak transcription	Spleen	Spleen

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