The 2.0 version of rSNPBase

Variant report

Variant nsv522525
Chromosome Location chr1:10165301-10165316
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10107400-10165400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:10125800-10165400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:10125800-10165400 Weak transcription Fetal Brain Male brain
4 chr1:10126400-10165400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:10132600-10165400 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:10134600-10166200 Weak transcription Colonic Mucosa Colon
7 chr1:10134600-10166600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:10135200-10165400 Weak transcription HUVEC blood vessel
9 chr1:10137600-10165600 Weak transcription Esophagus oesophagus
10 chr1:10144000-10165400 Weak transcription HSMMtube muscle
11 chr1:10145400-10189600 Weak transcription Psoas Muscle Psoas
12 chr1:10145600-10165400 Weak transcription Brain Angular Gyrus brain
13 chr1:10145600-10165400 Weak transcription Fetal Heart heart
14 chr1:10145800-10165400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:10145800-10197000 Weak transcription Stomach Mucosa stomach
16 chr1:10153800-10172200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:10154800-10172000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:10154800-10183000 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr1:10155000-10171400 Strong transcription Primary T cells fromperipheralblood blood
20 chr1:10155200-10166400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:10156400-10165400 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:10156800-10165400 Weak transcription Spleen Spleen
23 chr1:10157200-10165600 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr1:10157800-10165400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:10158400-10178000 Strong transcription Primary T cells from cord blood blood
26 chr1:10158600-10174000 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr1:10160200-10175800 Strong transcription Fetal Stomach stomach
28 chr1:10160400-10167600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:10160400-10167800 Strong transcription Fetal Muscle Leg muscle
30 chr1:10160400-10168000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:10160400-10169600 Strong transcription Dnd41 blood
32 chr1:10160400-10171400 Strong transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:10160600-10167000 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr1:10160600-10171800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:10160800-10165600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:10160800-10167200 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr1:10160800-10168600 Strong transcription HUES6 Cell Line embryonic stem cell
38 chr1:10161000-10165400 Strong transcription Adipose Nuclei Adipose
39 chr1:10161000-10165400 Strong transcription Stomach Smooth Muscle stomach
40 chr1:10161000-10167000 Strong transcription A549 lung
41 chr1:10161000-10167200 Strong transcription Primary monocytes fromperipheralblood blood
42 chr1:10161000-10167400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:10161000-10167400 Strong transcription NHDF-Ad bronchial
44 chr1:10161000-10167600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:10161000-10167600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:10161000-10168000 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr1:10161000-10169000 Strong transcription Duodenum Smooth Muscle Duodenum
48 chr1:10161000-10169200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:10161000-10169200 Strong transcription K562 blood
50 chr1:10161000-10169400 Strong transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015