Variant report

Variant	nsv522608
Chromosome Location	chr6:2032259-2203888
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1637)
CpG islands
(count:427)
Chromatin interactive
region (count:76)
LncRNA
region (count:36)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1637 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:2196329-2196680	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:2159048-2159052	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:2104544-2104926	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:2054021-2054064	HepG2	liver:	n/a	n/a
5	ATF1	chr6:2124471-2124901	K562	blood:	n/a	n/a
6	ATF1	chr6:2183672-2183765	K562	blood:	n/a	n/a
7	ATF1	chr6:2063914-2064084	K562	blood:	n/a	n/a
8	ATF1	chr6:2196478-2196678	K562	blood:	n/a	n/a
9	ATF1	chr6:2127958-2128208	K562	blood:	n/a	n/a
10	ATF1	chr6:2155769-2155848	K562	blood:	n/a	n/a
11	ATF1	chr6:2182571-2182759	K562	blood:	n/a	n/a
12	ATF2	chr6:2081607-2082134	GM12878	blood:	n/a	n/a
13	ATF2	chr6:2158011-2158521	GM12878	blood:	n/a	n/a
14	ATF2	chr6:2129217-2129887	GM12878	blood:	n/a	n/a
15	ATF2	chr6:2186661-2187233	GM12878	blood:	n/a	n/a
16	ATF2	chr6:2079063-2079591	GM12878	blood:	n/a	n/a
17	ATF2	chr6:2186702-2187196	GM12878	blood:	n/a	n/a
18	ATF2	chr6:2110844-2112017	GM12878	blood:	n/a	n/a
19	ATF2	chr6:2127588-2128027	GM12878	blood:	n/a	n/a
20	ATF2	chr6:2129176-2129995	GM12878	blood:	n/a	n/a
21	ATF2	chr6:2111114-2112016	GM12878	blood:	n/a	n/a
22	ATF3	chr6:2111370-2111777	HCT-116	colon:	n/a	chr6:2111530-2111545 chr6:2111531-2111544
23	BACH1	chr6:2158879-2159189	H1-hESC	embryonic stem cell:	n/a	n/a
24	BATF	chr6:2158074-2158348	GM12878	blood:	n/a	n/a
25	BATF	chr6:2161920-2162182	GM12878	blood:	n/a	chr6:2162063-2162074
26	BATF	chr6:2111319-2111990	GM12878	blood:	n/a	chr6:2111639-2111650 chr6:2111531-2111544
27	BATF	chr6:2111329-2111889	GM12878	blood:	n/a	chr6:2111639-2111650 chr6:2111531-2111544
28	BATF	chr6:2186732-2187068	GM12878	blood:	n/a	n/a
29	BATF	chr6:2158049-2158395	GM12878	blood:	n/a	n/a
30	BATF	chr6:2161935-2162214	GM12878	blood:	n/a	chr6:2162063-2162074
31	BATF	chr6:2186761-2187144	GM12878	blood:	n/a	n/a
32	BATF	chr6:2157291-2157615	GM12878	blood:	n/a	n/a
33	BCL11A	chr6:2111264-2111905	GM12878	blood:	n/a	chr6:2111638-2111647 chr6:2111639-2111648 chr6:2111589-2111598 chr6:2111822-2111831
34	BCL11A	chr6:2111331-2111731	GM12878	blood:	n/a	chr6:2111638-2111647 chr6:2111639-2111648 chr6:2111589-2111598
35	BCL11A	chr6:2186818-2187044	GM12878	blood:	n/a	chr6:2186988-2186997
36	BCL11A	chr6:2194996-2195165	GM12878	blood:	n/a	n/a
37	BCL11A	chr6:2158074-2158406	GM12878	blood:	n/a	n/a
38	BCL11A	chr6:2079176-2079524	GM12878	blood:	n/a	n/a
39	BCL11A	chr6:2186717-2187126	GM12878	blood:	n/a	chr6:2186988-2186997
40	BCL3	chr6:2157541-2157964	GM12878	blood:	n/a	chr6:2157712-2157721
41	BCL3	chr6:2129238-2129889	GM12878	blood:	n/a	n/a
42	BCL3	chr6:2186732-2187122	GM12878	blood:	n/a	chr6:2186988-2186997
43	BCLAF1	chr6:2158041-2158533	GM12878	blood:	n/a	n/a
44	BCLAF1	chr6:2129190-2129959	GM12878	blood:	n/a	n/a
45	BCLAF1	chr6:2104414-2104922	GM12878	blood:	n/a	n/a
46	BCLAF1	chr6:2111435-2111937	GM12878	blood:	n/a	chr6:2111638-2111647 chr6:2111639-2111648 chr6:2111589-2111598 chr6:2111822-2111831
47	BHLHE40	chr6:2124551-2124863	K562	blood:	n/a	n/a
48	BHLHE40	chr6:2111337-2111790	GM12878	blood:	n/a	n/a
49	BHLHE40	chr6:2110839-2111080	GM12878	blood:	n/a	n/a
50	BHLHE40	chr6:2048167-2048485	HepG2	liver:	n/a	n/a

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:2063957-2064007	MCF10A-Er-Src	breast:	n/a
2	chr6:2110875-2110925	GM12878	blood:	n/a
3	chr6:2110875-2110925	Hepatocyte	liver:	n/a
4	chr6:2134144-2134194	HCF	heart:	n/a
5	chr6:2134144-2134194	MCF-7	breast:	n/a
6	chr6:2134144-2134194	SKMC	muscle:	n/a
7	chr6:2197772-2197822	HRCEpiC	kidney:	n/a
8	chr6:2134144-2134194	HepG2	liver:	n/a
9	chr6:2197772-2197822	CMK	blood:	n/a
10	chr6:2104322-2104372	SK-N-SH_RA	brain:	n/a
11	chr6:2141241-2141291	PrEC	prostate:	n/a
12	chr6:2197772-2197822	ECC-1	luminal epithelium:	n/a
13	chr6:2197772-2197822	PrEC	prostate:	n/a
14	chr6:2110875-2110925	BE2_C	brain:	n/a
15	chr6:2197772-2197822	SK-N-SH	brain:	n/a
16	chr6:2110875-2110925	SAEC	small airway:	n/a
17	chr6:2168579-2168629	GM12891	blood:	n/a
18	chr6:2168579-2168629	HPAEpiC	pulmonary alveolar:	n/a
19	chr6:2168579-2168629	GM12878	blood:	n/a
20	chr6:2104322-2104372	HNPCEpiC	eye:	n/a
21	chr6:2063957-2064007	Caco-2	colon:	n/a
22	chr6:2104322-2104372	AG04449	skin:	fetal
23	chr6:2141241-2141291	AoSMC	blood vessel:	n/a
24	chr6:2197772-2197822	K562	blood:	n/a
25	chr6:2168579-2168629	HAEpiC	amniotic membrane:	n/a
26	chr6:2110875-2110925	ovcar-3	ovarian:	n/a
27	chr6:2063957-2064007	AG09309	skin:	n/a
28	chr6:2168579-2168629	HCT-116	colon:	n/a
29	chr6:2168579-2168629	SAEC	small airway:	n/a
30	chr6:2168579-2168629	SK-N-SH_RA	brain:	n/a
31	chr6:2110875-2110925	HPAEpiC	pulmonary alveolar:	n/a
32	chr6:2197772-2197822	AG09319	gingival:	n/a
33	chr6:2197772-2197822	HEEpiC	esophagus:	n/a
34	chr6:2104322-2104372	RPTEC	kidney:	n/a
35	chr6:2141241-2141291	T-47D	breast:	n/a
36	chr6:2110875-2110925	IMR90	lung:	fetal
37	chr6:2168579-2168629	AG10803	skin:	n/a
38	chr6:2134144-2134194	HUVEC	blood vessel:	n/a
39	chr6:2141241-2141291	IMR90	lung:	fetal
40	chr6:2197772-2197822	GM19239	blood:	n/a
41	chr6:2104322-2104372	NT2-D1	testis:	n/a
42	chr6:2063957-2064007	SK-N-SH	brain:	n/a
43	chr6:2141241-2141291	HepG2	liver:	n/a
44	chr6:2197772-2197822	T-47D	breast:	n/a
45	chr6:2063957-2064007	SK-N-SH_RA	brain:	n/a
46	chr6:2110875-2110925	HRPEpiC	eye:	n/a
47	chr6:2110875-2110925	NH-A	brain:	n/a
48	chr6:2063957-2064007	HMEC	breast:	n/a
49	chr6:2063957-2064007	HEEpiC	esophagus:	n/a
50	chr6:2168579-2168629	HCPEpiC	choroid plexus:	n/a

(count:76 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:1604770..1605328-chr6:2158470..2159326,2	K562	blood:
2	chr6:2030064..2032046-chr6:2035936..2037834,2	K562	blood:
3	chr6:1604255..1605544-chr6:2104014..2105193,5	K562	blood:
4	chr6:1608425..1611671-chr6:2030333..2034108,4	MCF-7	breast:
5	chr6:2197465..2199923-chr6:2202426..2204312,2	K562	blood:
6	chr6:1612494..1615565-chr6:2103145..2107069,5	MCF-7	breast:
7	chr6:1616379..1619156-chr6:2096704..2099403,2	MCF-7	breast:
8	chr6:2158821..2161883-chr6:2164038..2166971,3	K562	blood:
9	chr6:2159025..2161764-chr6:2166698..2168603,2	MCF-7	breast:
10	chr6:2197465..2200771-chr6:2202426..2205380,3	K562	blood:
11	chr6:1604279..1605453-chr6:2196023..2197192,6	K562	blood:
12	chr6:2034659..2036744-chr6:2038441..2040012,2	K562	blood:
13	chr6:2070854..2072589-chr6:2073721..2075447,2	K562	blood:
14	chr6:1606456..1608668-chr6:2173309..2175661,2	MCF-7	breast:
15	chr6:1604328..1605242-chr6:2035866..2036724,2	MCF-7	breast:
16	chr6:2102993..2105699-chr6:2107973..2110016,2	K562	blood:
17	chr6:1604389..1605339-chr6:2037539..2038714,6	MCF-7	breast:
18	chr6:2053179..2055343-chr6:2055921..2058664,2	K562	blood:
19	chr6:2193645..2196467-chr6:2198133..2199923,2	K562	blood:
20	chr6:1610715..1613985-chr6:2196585..2199138,3	MCF-7	breast:
21	chr6:2102993..2105699-chr6:2107973..2110016,2	K562	blood:
22	chr6:2128247..2132613-chr6:2133683..2136448,4	K562	blood:
23	chr6:2165147..2167469-chr6:2167871..2169447,2	MCF-7	breast:
24	chr6:1608030..1611197-chr6:2098990..2102744,3	MCF-7	breast:
25	chr6:1604456..1604957-chr6:2104229..2104835,2	MCF-7	breast:
26	chr6:2159025..2161764-chr6:2166698..2168603,2	MCF-7	breast:
27	chr6:1641472..1642157-chr6:2040778..2041465,3	MCF-7	breast:
28	chr6:2197465..2199923-chr6:2202426..2204312,2	K562	blood:
29	chr6:2034659..2036744-chr6:2038441..2040012,2	K562	blood:
30	chr6:2165147..2167469-chr6:2167871..2169447,2	MCF-7	breast:
31	chr6:2107952..2110679-chr6:2111605..2113236,2	MCF-7	breast:
32	chr6:2081922..2083588-chr6:2088961..2091628,2	MCF-7	breast:
33	chr6:2161158..2164138-chr9:131314660..131316336,2	MCF-7	breast:
34	chr6:2040794..2041414-chr6:2132566..2133423,2	MCF-7	breast:
35	chr6:1610117..1612459-chr6:2103517..2106482,4	MCF-7	breast:
36	chr6:1603882..1604773-chr6:2196250..2196916,2	MCF-7	breast:
37	chr6:2191098..2193029-chr6:2196230..2198209,2	MCF-7	breast:
38	chr6:1607774..1610426-chr6:2098410..2101344,2	MCF-7	breast:
39	chr6:2040678..2043654-chr6:2103622..2106281,2	MCF-7	breast:
40	chr6:2191098..2193029-chr6:2196230..2198209,2	MCF-7	breast:
41	chr6:2040678..2043654-chr6:2103622..2106281,2	MCF-7	breast:
42	chr6:2159018..2159546-chr6:2196064..2196713,2	K562	blood:
43	chr6:2193645..2196467-chr6:2198133..2199923,2	K562	blood:
44	chr6:2110933..2112552-chr6:2126239..2128267,2	MCF-7	breast:
45	chr6:2070854..2072589-chr6:2073721..2075447,2	K562	blood:
46	chr6:2119577..2122402-chr6:2352666..2355381,2	MCF-7	breast:
47	chr6:2162382..2163882-chr7:156518679..156520785,2	MCF-7	breast:
48	chr6:2133819..2135581-chr6:2140564..2142589,2	K562	blood:
49	chr6:2134081..2137218-chr6:2139617..2142589,3	K562	blood:
50	chr6:1596571..1597477-chr6:2104218..2105175,4	K562	blood:

(count:36 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FOXC1-12	chr6:2125723-2125802	NONHSAT106599
2	lnc-FOXC1-12	chr6:2122004-2122075	NONHSAT106601
3	lnc-FOXC1-12	chr6:2107290-2107350	NONHSAT106600
4	lnc-FOXC1-12	chr6:2108159-2108260	NONHSAT106601
5	lnc-C6orf195-21	chr6:2152486-2152826	NONHSAT106605
6	lnc-C6orf195-22	chr6:2037712-2038201	NONHSAT106589
7	lnc-FOXC1-12	chr6:2108159-2108260	NONHSAT106599
8	lnc-FOXC1-12	chr6:2107862-2107975	NONHSAT106599
9	lnc-FOXC1-12	chr6:2122004-2122075	NONHSAT106600
10	lnc-FOXC1-12	chr6:2107862-2107975	NONHSAT106601
11	lnc-FOXC1-12	chr6:2120363-2120431	NONHSAT106599
12	lnc-FOXC1-12	chr6:2107466-2107557	NONHSAT106600
13	lnc-FOXC1-12	chr6:2107290-2107350	NONHSAT106601
14	lnc-FOXC1-12	chr6:2106666-2106822	NONHSAT106600
15	lnc-FOXC1-12	chr6:2122596-2124499	NONHSAT106601
16	lnc-FOXC1-12	chr6:2120205-2120250	NONHSAT106600
17	lnc-C6orf195-20	chr6:2167900-2168389	NONHSAT106610
18	lnc-FOXC1-12	chr6:2107466-2107557	NONHSAT106599
19	lnc-FOXC1-12	chr6:2107681-2107741	NONHSAT106601
20	lnc-FOXC1-12	chr6:2107681-2107741	NONHSAT106600
21	lnc-FOXC1-12	chr6:2106666-2106822	NONHSAT106599
22	lnc-FOXC1-12	chr6:2106666-2106822	NONHSAT106601
23	lnc-FOXC1-12	chr6:2123357-2124499	NONHSAT106600
24	lnc-FOXC1-12	chr6:2107290-2107350	NONHSAT106599
25	lnc-FOXC1-12	chr6:2125895-2126649	NONHSAT106599
26	lnc-WRNIP1-39	chr6:2191031-2191163	ucscGeneNc_uc003mts_1
27	lnc-FOXC1-12	chr6:2107466-2107557	NONHSAT106601
28	lnc-FOXC1-12	chr6:2107681-2107741	NONHSAT106599
29	lnc-C6orf195-21	chr6:2150891-2151124	NONHSAT106605
30	lnc-FOXC1-12	chr6:2122004-2122075	NONHSAT106599
31	lnc-FOXC1-12	chr6:2120205-2120250	NONHSAT106601
32	lnc-FOXC1-12	chr6:2108159-2108260	NONHSAT106600
33	lnc-FOXC1-12	chr6:2122596-2122839	NONHSAT106600
34	lnc-FOXC1-12	chr6:2120205-2120250	NONHSAT106599
35	lnc-WRNIP1-39	chr6:2194070-2194159	ucscGeneNc_uc003mts_1
36	lnc-FOXC1-12	chr6:2107862-2107975	NONHSAT106600

No data

Variant related genes	Relation type
GMDS	TF binding region
GMDS	CpG island
ENSG00000112699	chromatin interactions
ENSG00000197694	chromatin interactions
ENSG00000105983	chromatin interactions
ENSG00000250903	chromatin interactions
ENSG00000228395	chromatin interactions
ENSG00000054598	chromatin interactions

Extended variants
information (count: 6479 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:6479 , 50 per page) page: 1 2 3 4 5 6 7 ... 130

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9392356	chr6:2032259-2032260	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs186244339	chr6:2032283-2032284	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs188533227	chr6:2032300-2032301	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs117582054	chr6:2032303-2032304	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs146492975	chr6:2032399-2032400	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs557933929	chr6:2032400-2032401	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs577780267	chr6:2032467-2032468	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs115653114	chr6:2032498-2032499	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs376996155	chr6:2032520-2032521	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs72830126	chr6:2032565-2032566	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs573982653	chr6:2032573-2032574	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs577289976	chr6:2032633-2032634	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs9501791	chr6:2032637-2032638	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs557849214	chr6:2032644-2032645	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs60488115	chr6:2032689-2032690	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs181280187	chr6:2032714-2032715	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs547673350	chr6:2032805-2032806	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs577601858	chr6:2032816-2032817	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs533122339	chr6:2032851-2032852	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs537080773	chr6:2032860-2032861	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs527495486	chr6:2032867-2032868	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs7759455	chr6:2032887-2032888	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs185803756	chr6:2032921-2032922	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs535148356	chr6:2032956-2032957	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs77863375	chr6:2032962-2032963	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs190355936	chr6:2033021-2033022	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs183752806	chr6:2033030-2033031	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs534996703	chr6:2033056-2033057	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs113387744	chr6:2033072-2033073	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs186983304	chr6:2033164-2033165	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs555554910	chr6:2033175-2033176	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs537634584	chr6:2033179-2033180	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs77358430	chr6:2033382-2033383	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs145457384	chr6:2033429-2033430	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs542707833	chr6:2033430-2033431	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs539891417	chr6:2033452-2033453	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs77557853	chr6:2033492-2033493	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs148837304	chr6:2033495-2033496	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs143448177	chr6:2033541-2033542	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs34758524	chr6:2033542-2033543	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs192320671	chr6:2033593-2033594	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs563289054	chr6:2033636-2033637	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs532549794	chr6:2033656-2033657	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs572292820	chr6:2033683-2033684	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs548630332	chr6:2033702-2033703	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs377747900	chr6:2033731-2033732	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs565356179	chr6:2033753-2033754	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs552645859	chr6:2033761-2033762	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs138040409	chr6:2033780-2033781	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs534296358	chr6:2033804-2033805	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Prader-willi syndrome	20588305	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Developmental delay	19490664	CNVD
Cancer	21183584	CNVD
Multiple Epiphyseal Dysplasia	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Glaucoma	18694899	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Cancer	20164920	CNVD
Colorectal cancer	21297112	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Myelodysplastic syndrome	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Lung cancer	18438408	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Ewing''s sarcoma	17952124	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	20164919	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
small cell lung cancer	20016488	CNVD
Autism	22495311	CNVD
Autism	21448237	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD
Gastric cancer	22315472	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:1607 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:2006200-2034800	Weak transcription	HepG2	liver
2	chr6:2019800-2040000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr6:2022400-2035000	Weak transcription	Gastric	stomach
4	chr6:2022400-2042800	Weak transcription	Right Atrium	heart
5	chr6:2022400-2055600	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr6:2022400-2080600	Weak transcription	Duodenum Mucosa	Duodenum
7	chr6:2027000-2035000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr6:2028800-2032600	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr6:2029200-2032600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr6:2029200-2037000	Weak transcription	Primary T cells from cord blood	blood
11	chr6:2029800-2040400	Weak transcription	Stomach Mucosa	stomach
12	chr6:2030000-2053600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr6:2030400-2035000	Weak transcription	Pancreas	Pancrea
14	chr6:2030600-2034800	Weak transcription	Fetal Kidney	kidney
15	chr6:2030800-2038400	Weak transcription	Primary hematopoietic stem cells	blood
16	chr6:2031200-2039000	Weak transcription	Rectal Mucosa Donor 29	rectum
17	chr6:2031800-2032600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr6:2031800-2041800	Weak transcription	Rectal Mucosa Donor 31	rectum
19	chr6:2032000-2036600	Weak transcription	Brain Anterior Caudate	brain
20	chr6:2032000-2036600	Weak transcription	Thymus	Thymus
21	chr6:2032000-2037000	Weak transcription	Fetal Thymus	thymus
22	chr6:2032200-2036800	Weak transcription	Dnd41	blood
23	chr6:2032400-2032600	Enhancers	HSMM	muscle
24	chr6:2032600-2037600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr6:2032600-2038000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr6:2032600-2043400	Weak transcription	HSMM	muscle
27	chr6:2033800-2034800	Enhancers	Liver	Liver
28	chr6:2034200-2035200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr6:2034200-2044400	Weak transcription	Primary B cells from cord blood	blood
30	chr6:2034400-2035000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr6:2034600-2035400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr6:2034800-2035200	Flanking Active TSS	Liver	Liver
33	chr6:2034800-2035400	Strong transcription	HepG2	liver
34	chr6:2034800-2036000	Enhancers	Fetal Kidney	kidney
35	chr6:2035000-2035400	Enhancers	Fetal Brain Male	brain
36	chr6:2035000-2035600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr6:2035000-2035600	Enhancers	Gastric	stomach
38	chr6:2035000-2035600	Enhancers	Pancreas	Pancrea
39	chr6:2035200-2035600	Enhancers	Ovary	ovary
40	chr6:2035200-2035800	Enhancers	Liver	Liver
41	chr6:2035200-2038200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr6:2035400-2035800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
43	chr6:2035400-2035800	Genic enhancers	HepG2	liver
44	chr6:2035400-2038400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr6:2035600-2037600	Weak transcription	Gastric	stomach
46	chr6:2035600-2038600	Weak transcription	Pancreas	Pancrea
47	chr6:2035600-2052600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
48	chr6:2035800-2036600	Weak transcription	Liver	Liver
49	chr6:2035800-2036800	Weak transcription	HepG2	liver
50	chr6:2035800-2038400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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