Variant report
Variant | nsv522788 |
---|---|
Chromosome Location | chr14:45043928-45066033 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs75032780 | chr14:45055417-45055418 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs186967838 | chr14:45055419-45055420 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs373022434 | chr14:45055420-45055421 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs12590699 | chr14:45055513-45055514 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
5 | rs150659015 | chr14:45055515-45055516 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs372804017 | chr14:45055533-45055534 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs548562820 | chr14:45055592-45055593 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs191335249 | chr14:45055619-45055620 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs528025394 | chr14:45055648-45055649 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs552726033 | chr14:45055657-45055658 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs35209096 | chr14:45055721-45055722 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
12 | rs138898809 | chr14:45055732-45055733 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs560906231 | chr14:45055733-45055734 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs146346714 | chr14:45055741-45055742 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs549642964 | chr14:45055760-45055761 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs540709454 | chr14:45055774-45055775 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs535440624 | chr14:45055779-45055780 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs184184520 | chr14:45055780-45055781 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs569169537 | chr14:45055786-45055787 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs572301981 | chr14:45055796-45055797 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs188628864 | chr14:45055816-45055817 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs557508679 | chr14:45055858-45055859 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs575855822 | chr14:45055879-45055880 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs193173552 | chr14:45055885-45055886 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs562653888 | chr14:45055914-45055915 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs369576641 | chr14:45055978-45055979 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs7142105 | chr14:45055981-45055982 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
28 | rs184979243 | chr14:45055984-45055985 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs560321882 | chr14:45056010-45056011 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs189874217 | chr14:45056015-45056016 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs565738840 | chr14:45056025-45056026 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs535074753 | chr14:45056045-45056046 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs552620802 | chr14:45056078-45056079 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs548406824 | chr14:45056135-45056136 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs571026832 | chr14:45056180-45056181 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs531958812 | chr14:45056187-45056188 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs139508034 | chr14:45056189-45056190 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs568165886 | chr14:45056211-45056212 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs535243745 | chr14:45056248-45056249 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs553712973 | chr14:45056338-45056339 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs1959368 | chr14:45056371-45056372 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
42 | rs539690139 | chr14:45056392-45056393 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs557644999 | chr14:45056419-45056420 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs575790526 | chr14:45056438-45056439 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs191875891 | chr14:45056452-45056453 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs555186344 | chr14:45056490-45056491 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs183906624 | chr14:45056543-45056544 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs541995642 | chr14:45056549-45056550 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs10130691 | chr14:45056564-45056565 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
50 | rs144223918 | chr14:45056570-45056571 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Breast cancer | 17899364 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Wilms tumour | 21544195 | CNVD |
Lung cancer | 18438408 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Prostate cancer | 18632612 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Breast cancer | 21858162 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Cancer | 21183584 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Renal cell carcinoma | 18194544 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 21364760 | CNVD |
Melanoma | 17363583 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:45055400-45056600 | Enhancers | Pancreatic Islets | Pancreatic Islet |