No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs1555101 |
chr1:171749665-171749666 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs567273205 |
chr1:171749667-171749668 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs141106158 |
chr1:171749720-171749721 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs150259740 |
chr1:171749801-171749802 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs1555102 |
chr1:171749809-171749810 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
6 |
rs531813143 |
chr1:171749864-171749865 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs199752507 |
chr1:171749865-171749866 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs56148613 |
chr1:171749880-171749881 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs12164596 |
chr1:171749884-171749885 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs538796484 |
chr1:171749896-171749897 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs557996550 |
chr1:171749933-171749934 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs139244072 |
chr1:171749937-171749938 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs540307039 |
chr1:171749985-171749986 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs572020363 |
chr1:171749998-171749999 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs386636776 |
chr1:171749999-171750000 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs376877237 |
chr1:171750000-171750001 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs547848414 |
chr1:171750002-171750003 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs2232804 |
chr1:171750003-171750004 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
19 |
rs2232805 |
chr1:171750047-171750048 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs187056323 |
chr1:171750075-171750076 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs2232806 |
chr1:171750087-171750088 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs2232807 |
chr1:171750095-171750096 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
23 |
rs111962742 |
chr1:171750103-171750104 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs545569118 |
chr1:171750113-171750114 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs61118254 |
chr1:171750122-171750123 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs2232808 |
chr1:171750141-171750142 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
27 |
rs374120671 |
chr1:171750159-171750160 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs191449875 |
chr1:171750172-171750173 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs540857183 |
chr1:171750173-171750174 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs2232809 |
chr1:171750181-171750182 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
31 |
rs548759338 |
chr1:171750187-171750188 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs116813752 |
chr1:171750198-171750199 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs531171612 |
chr1:171750236-171750237 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs201909232 |
chr1:171750237-171750238 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs549683932 |
chr1:171750261-171750262 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs75887135 |
chr1:171750284-171750285 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs2232810 |
chr1:171750300-171750301 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs374898995 |
chr1:171750312-171750313 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs563180425 |
chr1:171750323-171750324 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs147507415 |
chr1:171750333-171750334 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs566899157 |
chr1:171750338-171750339 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs111322048 |
chr1:171750368-171750369 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs534303863 |
chr1:171750413-171750414 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs555863389 |
chr1:171750425-171750426 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs574105729 |
chr1:171750426-171750427 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs113602057 |
chr1:171750439-171750440 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs138419860 |
chr1:171750441-171750442 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs578191877 |
chr1:171750450-171750451 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs149581771 |
chr1:171750456-171750457 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs2232811 |
chr1:171750471-171750472 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
15 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|