Variant report

Variant	nsv523035
Chromosome Location	chr6:167620431-167665326
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:966)
CpG islands
(count:1527)
Chromatin interactive
region (count:9)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:966 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:167628930-167629130	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:167637599-167638030	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:167651727-167651738	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:167652605-167653007	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:167632046-167632420	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:167645950-167646149	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:167629887-167630151	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:167624462-167624811	HepG2	liver:	n/a	n/a
9	ARID3A	chr6:167633428-167633974	HepG2	liver:	n/a	n/a
10	ARID3A	chr6:167655013-167655211	HepG2	liver:	n/a	n/a
11	ARID3A	chr6:167629415-167629646	HepG2	liver:	n/a	n/a
12	ATF2	chr6:167651500-167652487	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr6:167641333-167641936	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr6:167641353-167641826	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr6:167626020-167626431	GM12878	blood:	n/a	n/a
16	ATF2	chr6:167625939-167626508	GM12878	blood:	n/a	n/a
17	BACH1	chr6:167641591-167641850	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr6:167631950-167632087	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr6:167637370-167637829	H1-hESC	embryonic stem cell:	n/a	n/a
20	BATF	chr6:167625794-167626502	GM12878	blood:	n/a	n/a
21	BATF	chr6:167631870-167632155	GM12878	blood:	n/a	n/a
22	BATF	chr6:167625959-167626402	GM12878	blood:	n/a	n/a
23	BCL11A	chr6:167626130-167626424	GM12878	blood:	n/a	n/a
24	BHLHE40	chr6:167629860-167630298	HepG2	liver:	n/a	n/a
25	BHLHE40	chr6:167629939-167630334	HepG2	liver:	n/a	n/a
26	BHLHE40	chr6:167631930-167632149	K562	blood:	n/a	n/a
27	BHLHE40	chr6:167626013-167626185	GM12878	blood:	n/a	n/a
28	BHLHE40	chr6:167637543-167637955	HepG2	liver:	n/a	n/a
29	BHLHE40	chr6:167631978-167632147	GM12878	blood:	n/a	n/a
30	BHLHE40	chr6:167631891-167632258	HepG2	liver:	n/a	n/a
31	BRCA1	chr6:167624418-167624607	HepG2	liver:	n/a	n/a
32	BRCA1	chr6:167625284-167625312	HepG2	liver:	n/a	n/a
33	BRCA1	chr6:167633650-167633694	HepG2	liver:	n/a	n/a
34	CBX3	chr6:167637348-167638006	HCT-116	colon:	n/a	n/a
35	CEBPB	chr6:167629908-167630318	HepG2	liver:	n/a	n/a
36	CEBPB	chr6:167652443-167653271	HepG2	liver:	n/a	n/a
37	CEBPB	chr6:167639701-167639901	K562	blood:	n/a	chr6:167639837-167639848 chr6:167639839-167639848 chr6:167639839-167639850
38	CEBPB	chr6:167629863-167630222	HepG2	liver:	n/a	n/a
39	CEBPB	chr6:167658239-167658916	H1-hESC	embryonic stem cell:	n/a	n/a
40	CEBPB	chr6:167633762-167634102	HepG2	liver:	n/a	n/a
41	CEBPB	chr6:167629456-167629648	HepG2	liver:	n/a	chr6:167629574-167629585 chr6:167629574-167629585 chr6:167629572-167629585
42	CEBPB	chr6:167639673-167640002	HepG2	liver:	n/a	chr6:167639837-167639848 chr6:167639839-167639848 chr6:167639839-167639850
43	CEBPB	chr6:167639685-167640004	H1-hESC	embryonic stem cell:	n/a	chr6:167639837-167639848 chr6:167639839-167639848 chr6:167639839-167639850
44	CEBPB	chr6:167629904-167630160	HepG2	liver:	n/a	n/a
45	CEBPB	chr6:167624471-167624762	HepG2	liver:	n/a	n/a
46	CEBPB	chr6:167629950-167630124	HepG2	liver:	n/a	n/a
47	CEBPD	chr6:167655889-167656224	K562	blood:	n/a	n/a
48	CEBPD	chr6:167629889-167630187	HepG2	liver:	n/a	n/a
49	CHD1	chr6:167642348-167643336	H1-hESC	embryonic stem cell:	n/a	n/a
50	CHD2	chr6:167643170-167643321	H1-hESC	embryonic stem cell:	n/a	n/a

(count:1527 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:167654977-167655027	NH-A	brain:	n/a
2	chr6:167649539-167649589	RPTEC	kidney:	n/a
3	chr6:167654977-167655027	NH-A	brain:	n/a
4	chr6:167649539-167649589	RPTEC	kidney:	n/a
5	chr6:167649336-167649386	PrEC	prostate:	n/a
6	chr6:167655053-167655103	IMR90	lung:	fetal
7	chr6:167637331-167637381	HCT-116	colon:	n/a
8	chr6:167631788-167631838	MCF-7	breast:	n/a
9	chr6:167632873-167632923	K562	blood:	n/a
10	chr6:167634139-167634189	A549	lung:	n/a
11	chr6:167649749-167649799	AoSMC	blood vessel:	n/a
12	chr6:167637331-167637381	HRCEpiC	kidney:	n/a
13	chr6:167649749-167649799	HRPEpiC	eye:	n/a
14	chr6:167622202-167622252	HAEpiC	amniotic membrane:	n/a
15	chr6:167633955-167634005	SKMC	muscle:	n/a
16	chr6:167622202-167622252	ProgFib	skin:	n/a
17	chr6:167658907-167658957	SK-N-MC	brain:	n/a
18	chr6:167633955-167634005	MCF10A-Er-Src	breast:	n/a
19	chr6:167622441-167622491	NH-A	brain:	n/a
20	chr6:167632873-167632923	SAEC	small airway:	n/a
21	chr6:167653907-167653957	HCF	heart:	n/a
22	chr6:167631788-167631838	HEK293	kidney:	embryo
23	chr6:167649336-167649386	GM12878	blood:	n/a
24	chr6:167623149-167623199	A549	lung:	n/a
25	chr6:167622441-167622491	AG09319	gingival:	n/a
26	chr6:167637331-167637381	NHBE	bronchial:	n/a
27	chr6:167623149-167623199	HUVEC	blood vessel:	n/a
28	chr6:167655290-167655340	AG09309	skin:	n/a
29	chr6:167655290-167655340	HepG2	liver:	n/a
30	chr6:167654977-167655027	AG09319	gingival:	n/a
31	chr6:167649539-167649589	AG04450	lung:	fetal
32	chr6:167649749-167649799	NB4	blood:	n/a
33	chr6:167653982-167654032	Hepatocyte	liver:	n/a
34	chr6:167649256-167649306	ECC-1	luminal epithelium:	n/a
35	chr6:167655053-167655103	Hela-S3	cervix:	n/a
36	chr6:167649749-167649799	IMR90	lung:	fetal
37	chr6:167653907-167653957	HEK293	kidney:	embryo
38	chr6:167649384-167649434	HEK293	kidney:	embryo
39	chr6:167649256-167649306	ovcar-3	ovarian:	n/a
40	chr6:167658907-167658957	SAEC	small airway:	n/a
41	chr6:167649631-167649681	GM12878	blood:	n/a
42	chr6:167622202-167622252	HCM	heart:	n/a
43	chr6:167661905-167661955	HRPEpiC	eye:	n/a
44	chr6:167653982-167654032	ProgFib	skin:	n/a
45	chr6:167661905-167661955	HL-60	blood:	n/a
46	chr6:167649749-167649799	ECC-1	luminal epithelium:	n/a
47	chr6:167634139-167634189	HL-60	blood:	n/a
48	chr6:167661905-167661955	RPTEC	kidney:	n/a
49	chr6:167622441-167622491	HNPCEpiC	eye:	n/a
50	chr6:167649631-167649681	MCF10A-Er-Src	breast:	n/a

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:167662732..167663315-chr6:167819023..167819880,2	K562	blood:
2	chr6:167631565..167632072-chr6:167702069..167702692,3	K562	blood:
3	chr6:167620399..167623068-chr6:167623897..167626646,2	K562	blood:
4	chr6:167623945..167626187-chr6:168297648..168300373,2	K562	blood:
5	chr6:167623779..167626117-chr6:167629928..167632260,2	MCF-7	breast:
6	chr6:167636874..167638495-chr6:167694115..167696567,2	K562	blood:
7	chr6:167662535..167665478-chr6:167668701..167671430,2	K562	blood:
8	chr6:167623779..167626117-chr6:167629928..167632260,2	MCF-7	breast:
9	chr6:167631751..167632287-chr6:167701939..167702527,2	MCF-7	breast:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GPR31-1	chr6:167653636-167653833	XLOC_005921
2	lnc-UNC93A-1	chr6:167659275-167659404	XLOC_005540
3	lnc-GPR31-1	chr6:167650996-167651293	XLOC_005921
4	lnc-GPR31-1	chr6:167651156-167651293	XLOC_005921
5	lnc-UNC93A-1	chr6:167655379-167655453	XLOC_005540
6	lnc-GPR31-1	chr6:167653688-167653968	XLOC_005921

No data

Variant related genes	Relation type
ENSG00000231720	TF binding region
ENSG00000228648	TF binding region
ENSG00000216966	TF binding region
ENSG00000231720	CpG island
ENSG00000228648	CpG island
ENSG00000216966	CpG island
ENSG00000216966	chromatin interactions
CYBASC3	miRNA target sites
CYB5R4	miRNA target sites

Extended variants
information (count: 2243 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:2243 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10946232	chr6:167620431-167620432	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs373826291	chr6:167620447-167620448	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
3	rs184235492	chr6:167620471-167620472	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
4	rs564060710	chr6:167620474-167620475	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
5	rs528067248	chr6:167620476-167620477	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
6	rs546235076	chr6:167620482-167620483	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
7	rs79873725	chr6:167620489-167620490	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
8	rs71554327	chr6:167620501-167620502	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
9	rs9348233	chr6:167620502-167620503	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs550734919	chr6:167620504-167620505	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
11	rs569451059	chr6:167620532-167620533	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
12	rs539679779	chr6:167620540-167620541	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
13	rs138210995	chr6:167620541-167620542	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
14	rs566901331	chr6:167620575-167620576	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
15	rs534178170	chr6:167620580-167620581	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
16	rs555809821	chr6:167620590-167620591	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
17	rs574736205	chr6:167620624-167620625	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
18	rs150367381	chr6:167620625-167620626	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
19	rs374230706	chr6:167620629-167620630	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
20	rs187760300	chr6:167620632-167620633	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
21	rs9348234	chr6:167620644-167620645	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs9366105	chr6:167620645-167620646	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs9364895	chr6:167620668-167620669	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs574854026	chr6:167620700-167620701	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
25	rs200605880	chr6:167620728-167620729	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
26	rs2023592	chr6:167620731-167620732	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs561369736	chr6:167620733-167620734	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
28	rs884516	chr6:167620740-167620741	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
29	rs529511364	chr6:167620745-167620746	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
30	rs551241564	chr6:167620748-167620749	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
31	rs563066996	chr6:167620820-167620821	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
32	rs371783837	chr6:167620848-167620849	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
33	rs193115169	chr6:167620872-167620873	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
34	rs73267358	chr6:167620891-167620892	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs551730336	chr6:167620901-167620902	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
36	rs566918715	chr6:167620903-167620904	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
37	rs79637042	chr6:167620933-167620934	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
38	rs78067071	chr6:167620960-167620961	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
39	rs549368659	chr6:167620976-167620977	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
40	rs567677817	chr6:167620986-167620987	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
41	rs368037641	chr6:167621013-167621014	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs111451256	chr6:167621042-167621043	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs144023775	chr6:167621074-167621075	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs61686741	chr6:167621105-167621106	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs367947502	chr6:167621116-167621117	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs569103655	chr6:167621142-167621143	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs76631703	chr6:167621152-167621153	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs557676193	chr6:167621163-167621164	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs34682764	chr6:167621208-167621209	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs62439205	chr6:167621244-167621245	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Chordoma	18071362	CNVD
Glioblastoma multiforme	19435819	CNVD
Developmental delay	21147756	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Epilepsy	22083797	CNVD
Myelofibrosis	22110671	CNVD
chordoma	19801981	CNVD
Myxofibrosarcoma	16751306	CNVD
Autism	17483303	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute myeloid leukemia	19651601	CNVD
Sudden cardiac death	19188705	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164919	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:635 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:167613800-167622200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:167614400-167623200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr6:167615800-167628800	Weak transcription	Right Atrium	heart
4	chr6:167617400-167620800	Enhancers	HepG2	liver
5	chr6:167617400-167622400	Weak transcription	Fetal Intestine Large	intestine
6	chr6:167618400-167624400	Weak transcription	Colon Smooth Muscle	Colon
7	chr6:167619000-167622400	Weak transcription	Fetal Intestine Small	intestine
8	chr6:167619000-167624200	Weak transcription	Rectal Smooth Muscle	rectum
9	chr6:167620200-167620800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
10	chr6:167620200-167621000	Enhancers	Placenta Amnion	Placenta Amnion
11	chr6:167620200-167621200	Enhancers	Fetal Brain Male	brain
12	chr6:167620200-167621600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr6:167620400-167620800	Enhancers	Spleen	Spleen
14	chr6:167620800-167621000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr6:167620800-167621000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
16	chr6:167620800-167622400	Weak transcription	HepG2	liver
17	chr6:167621000-167622400	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr6:167621000-167623600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr6:167621200-167623000	Weak transcription	Fetal Brain Male	brain
20	chr6:167621600-167624400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr6:167622200-167623000	Enhancers	H1 Cell Line	embryonic stem cell
22	chr6:167622200-167623000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
23	chr6:167622200-167624600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr6:167622200-167624600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr6:167622400-167622800	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr6:167622400-167622800	Enhancers	Fetal Intestine Large	intestine
27	chr6:167622400-167623200	Enhancers	Fetal Intestine Small	intestine
28	chr6:167622400-167626600	Enhancers	Placenta Amnion	Placenta Amnion
29	chr6:167622400-167627200	Enhancers	HepG2	liver
30	chr6:167622600-167623000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
31	chr6:167622800-167623000	Enhancers	H9 Cell Line	embryonic stem cell
32	chr6:167622800-167624200	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr6:167623000-167623400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
34	chr6:167623000-167623800	Weak transcription	H1 Cell Line	embryonic stem cell
35	chr6:167623000-167629200	Enhancers	Fetal Brain Male	brain
36	chr6:167623200-167623800	Weak transcription	Fetal Intestine Small	intestine
37	chr6:167623200-167624600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr6:167623400-167624200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
39	chr6:167623600-167623800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr6:167623600-167628200	Enhancers	Fetal Brain Female	brain
41	chr6:167623800-167624400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr6:167623800-167624600	Enhancers	H1 Cell Line	embryonic stem cell
43	chr6:167624000-167624600	Enhancers	HUES64 Cell Line	embryonic stem cell
44	chr6:167624000-167624800	Enhancers	Brain Germinal Matrix	brain
45	chr6:167624200-167624600	Enhancers	ES-I3 Cell Line	embryonic stem cell
46	chr6:167624200-167624600	Enhancers	HUES6 Cell Line	embryonic stem cell
47	chr6:167624200-167624600	Bivalent Enhancer	Brain Cingulate Gyrus	brain
48	chr6:167624200-167624600	Enhancers	Lung	lung
49	chr6:167624200-167624800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
50	chr6:167624200-167625600	Enhancers	Rectal Smooth Muscle	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links