Variant report

Variant	nsv523082
Chromosome Location	chr11:93834223-93866147
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:910)
CpG islands
(count:1344)
Chromatin interactive
region (count:29)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:910 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:93861663-93862073	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:93861882-93862074	K562	blood:	n/a	n/a
3	ARID3A	chr11:93864874-93865280	K562	blood:	n/a	n/a
4	ARID3A	chr11:93863941-93864082	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:93849537-93849719	HepG2	liver:	n/a	n/a
6	ARID3A	chr11:93840637-93840874	K562	blood:	n/a	n/a
7	ATF1	chr11:93865037-93865267	K562	blood:	n/a	n/a
8	ATF1	chr11:93861837-93862135	K562	blood:	n/a	n/a
9	ATF2	chr11:93861539-93862091	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr11:93861445-93861731	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr11:93861575-93862043	GM12878	blood:	n/a	n/a
12	ATF2	chr11:93861710-93862375	GM12878	blood:	n/a	n/a
13	ATF3	chr11:93862257-93862541	K562	blood:	n/a	chr11:93862383-93862392
14	BACH1	chr11:93839944-93839957	K562	blood:	n/a	n/a
15	BACH1	chr11:93861448-93862639	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr11:93865234-93865434	K562	blood:	n/a	n/a
17	BCL3	chr11:93861678-93862220	A549	lung:	n/a	chr11:93861906-93861915 chr11:93862074-93862087 chr11:93862098-93862107
18	BCL3	chr11:93861593-93862215	A549	lung:	n/a	chr11:93861906-93861915 chr11:93862074-93862087 chr11:93862098-93862107
19	BCLAF1	chr11:93861670-93862633	GM12878	blood:	n/a	chr11:93861906-93861915 chr11:93862277-93862286 chr11:93862074-93862087 chr11:93862098-93862107
20	BCLAF1	chr11:93861428-93862271	GM12878	blood:	n/a	chr11:93861906-93861915 chr11:93862074-93862087 chr11:93862098-93862107
21	BHLHE40	chr11:93865116-93865216	K562	blood:	n/a	n/a
22	BHLHE40	chr11:93862441-93862767	A549	lung:	n/a	n/a
23	BHLHE40	chr11:93861541-93863391	GM12878	blood:	n/a	chr11:93862043-93862059 chr11:93862148-93862164
24	BHLHE40	chr11:93861199-93861213	K562	blood:	n/a	n/a
25	BHLHE40	chr11:93865530-93865654	K562	blood:	n/a	n/a
26	BHLHE40	chr11:93863745-93864339	K562	blood:	n/a	n/a
27	BHLHE40	chr11:93861739-93862828	HepG2	liver:	n/a	chr11:93862043-93862059 chr11:93862148-93862164
28	BHLHE40	chr11:93861537-93862831	K562	blood:	n/a	chr11:93862043-93862059 chr11:93862148-93862164
29	BHLHE40	chr11:93863170-93863491	K562	blood:	n/a	n/a
30	BRCA1	chr11:93862648-93862738	HepG2	liver:	n/a	n/a
31	BRCA1	chr11:93861661-93862075	Hela-S3	cervix:	n/a	n/a
32	BRCA1	chr11:93862076-93862314	GM12878	blood:	n/a	n/a
33	BRCA1	chr11:93861641-93862319	HepG2	liver:	n/a	n/a
34	BRCA1	chr11:93862566-93862756	GM12878	blood:	n/a	n/a
35	BRCA1	chr11:93862293-93862834	Hela-S3	cervix:	n/a	n/a
36	BRCA1	chr11:93863994-93864103	H1-hESC	embryonic stem cell:	n/a	n/a
37	BRCA1	chr11:93862695-93862790	H1-hESC	embryonic stem cell:	n/a	n/a
38	BRCA1	chr11:93862263-93862463	H1-hESC	embryonic stem cell:	n/a	n/a
39	CBX3	chr11:93858423-93858990	K562	blood:	n/a	n/a
40	CBX3	chr11:93861435-93862851	K562	blood:	n/a	n/a
41	CCNT2	chr11:93861795-93862821	K562	blood:	n/a	n/a
42	CEBPB	chr11:93849493-93849974	HepG2	liver:	n/a	chr11:93849668-93849681 chr11:93849670-93849681
43	CEBPB	chr11:93864991-93865184	K562	blood:	n/a	n/a
44	CEBPB	chr11:93849579-93849934	HepG2	liver:	n/a	chr11:93849668-93849681 chr11:93849670-93849681
45	CEBPB	chr11:93863810-93864402	IMR90	lung:	n/a	chr11:93864036-93864047 chr11:93864035-93864048 chr11:93864035-93864046 chr11:93864035-93864048 chr11:93864035-93864046 chr11:93864079-93864090 chr11:93864035-93864048
46	CEBPB	chr11:93849627-93849867	HepG2	liver:	n/a	chr11:93849668-93849681 chr11:93849670-93849681
47	CEBPB	chr11:93863856-93864236	Hela-S3	cervix:	n/a	chr11:93864036-93864047 chr11:93864035-93864048 chr11:93864035-93864046 chr11:93864035-93864048 chr11:93864035-93864046 chr11:93864079-93864090 chr11:93864035-93864048
48	CEBPB	chr11:93848426-93848517	K562	blood:	n/a	n/a
49	CEBPB	chr11:93850524-93850624	K562	blood:	n/a	n/a
50	CEBPB	chr11:93849508-93849996	MCF-7	breast:	n/a	chr11:93849668-93849681 chr11:93849670-93849681

(count:1344 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:93861839-93861889	Jurkat	blood:	n/a
2	chr11:93862073-93862123	AG04449	skin:	fetal
3	chr11:93861839-93861889	Jurkat	blood:	n/a
4	chr11:93862073-93862123	AG04449	skin:	fetal
5	chr11:93846406-93846456	GM19239	blood:	n/a
6	chr11:93862039-93862089	HEK293	kidney:	embryo
7	chr11:93862716-93862766	Hepatocyte	liver:	n/a
8	chr11:93862257-93862307	HNPCEpiC	eye:	n/a
9	chr11:93861954-93862004	HRPEpiC	eye:	n/a
10	chr11:93861851-93861901	IMR90	lung:	fetal
11	chr11:93862257-93862307	K562	blood:	n/a
12	chr11:93864142-93864192	HCF	heart:	n/a
13	chr11:93862516-93862566	HNPCEpiC	eye:	n/a
14	chr11:93862630-93862680	NHBE	bronchial:	n/a
15	chr11:93862073-93862123	HRPEpiC	eye:	n/a
16	chr11:93860745-93860795	K562	blood:	n/a
17	chr11:93846406-93846456	K562	blood:	n/a
18	chr11:93862516-93862566	GM19239	blood:	n/a
19	chr11:93861839-93861889	LNCaP	prostate:	n/a
20	chr11:93861987-93862037	HPAEpiC	pulmonary alveolar:	n/a
21	chr11:93862630-93862680	Hela-S3	cervix:	n/a
22	chr11:93861987-93862037	MCF-7	breast:	n/a
23	chr11:93863858-93863908	AG09309	skin:	n/a
24	chr11:93862594-93862644	AG04449	skin:	fetal
25	chr11:93862516-93862566	HRCEpiC	kidney:	n/a
26	chr11:93862630-93862680	AG04449	skin:	fetal
27	chr11:93860745-93860795	ProgFib	skin:	n/a
28	chr11:93862516-93862566	HepG2	liver:	n/a
29	chr11:93861839-93861889	BJ	skin:	n/a
30	chr11:93865443-93865493	HMEC	breast:	n/a
31	chr11:93862749-93862799	Hela-S3	cervix:	n/a
32	chr11:93861987-93862037	HepG2	liver:	n/a
33	chr11:93862257-93862307	T-47D	breast:	n/a
34	chr11:93865443-93865493	SK-N-SH_RA	brain:	n/a
35	chr11:93862073-93862123	HCM	heart:	n/a
36	chr11:93861954-93862004	HL-60	blood:	n/a
37	chr11:93862630-93862680	IMR90	lung:	fetal
38	chr11:93862257-93862307	GM06990	blood:	n/a
39	chr11:93862257-93862307	SK-N-SH	brain:	n/a
40	chr11:93838695-93838745	HRPEpiC	eye:	n/a
41	chr11:93838695-93838745	PFSK-1	brain:	n/a
42	chr11:93850000-93850050	NT2-D1	testis:	n/a
43	chr11:93862594-93862644	A549	lung:	n/a
44	chr11:93862749-93862799	PFSK-1	brain:	n/a
45	chr11:93861934-93861984	HRPEpiC	eye:	n/a
46	chr11:93850000-93850050	SK-N-MC	brain:	n/a
47	chr11:93861954-93862004	NT2-D1	testis:	n/a
48	chr11:93862257-93862307	HL-60	blood:	n/a
49	chr11:93861779-93861829	GM12891	blood:	n/a
50	chr11:93862039-93862089	SK-N-MC	brain:	n/a

(count:29 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:74385975..74386476-chr11:93840420..93840920,2	NB4	blood:
2	chr11:93628291..93629247-chr11:93840284..93841220,3	MCF-7	breast:
3	chr1:151964881..151965549-chr11:93861551..93862232,2	Hela-S3	cervix:
4	chr11:93834842..93837359-chr11:93842691..93845268,2	K562	blood:
5	chr11:93844146..93845919-chr11:93859116..93861491,2	K562	blood:
6	chr11:93861273..93862040-chr8:141473868..141474564,2	Hela-S3	cervix:
7	chr11:93844204..93845981-chr11:93847595..93849691,2	MCF-7	breast:
8	chr11:93844146..93846103-chr11:93859991..93861903,2	K562	blood:
9	chr11:93839493..93841789-chr11:93842574..93845095,2	K562	blood:
10	chr11:93835888..93838608-chr11:93905991..93908122,2	K562	blood:
11	chr11:93865596..93867137-chr11:94149327..94151295,2	MCF-7	breast:
12	chr11:93843038..93846219-chr11:93861023..93863615,3	MCF-7	breast:
13	chr11:93844146..93845919-chr11:93859116..93861491,2	K562	blood:
14	chr11:93844146..93846103-chr11:93859991..93861903,2	K562	blood:
15	chr11:93837870..93840032-chr11:93846900..93849669,2	MCF-7	breast:
16	chr11:93840966..93842950-chr11:93859232..93861067,2	K562	blood:
17	chr11:93840966..93842950-chr11:93859232..93861067,2	K562	blood:
18	chr11:93866030..93868662-chr11:93884389..93887583,3	K562	blood:
19	chr11:93860234..93863458-chr11:94225545..94228425,3	K562	blood:
20	chr11:93862864..93865828-chr11:93884142..93886084,2	MCF-7	breast:
21	chr11:93861478..93862275-chr16:56642270..56643142,2	Hela-S3	cervix:
22	chr11:93854788..93857705-chr11:93859894..93862586,2	K562	blood:
23	chr11:93860451..93862555-chr11:93865619..93868399,2	MCF-7	breast:
24	chr11:93837870..93840032-chr11:93846900..93849669,2	MCF-7	breast:
25	chr11:93861851..93862593-chr17:41463845..41464835,2	Hela-S3	cervix:
26	chr11:93834842..93837359-chr11:93842691..93845268,2	K562	blood:
27	chr11:93844204..93845981-chr11:93847595..93849691,2	MCF-7	breast:
28	chr11:93839493..93841789-chr11:93842574..93845095,2	K562	blood:
29	chr11:93724420..93726827-chr11:93860849..93862959,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HEPHL1-1	chr11:93851046-93851433	NONHSAT023705

No data

Variant related genes	Relation type
PANX1	TF binding region
PANX1	CpG island
ENSG00000125148	chromatin interactions
ENSG00000263966	chromatin interactions
ENSG00000255995	chromatin interactions
ENSG00000168876	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000020922	chromatin interactions
ENSG00000110218	chromatin interactions
ENSG00000197747	chromatin interactions

Extended variants
information (count: 1319 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:1319 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7927016	chr11:93834223-93834224	Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs530737479	chr11:93834259-93834260	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs574515885	chr11:93834348-93834349	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs371699328	chr11:93834362-93834363	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs376452729	chr11:93834367-93834368	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs548831531	chr11:93834383-93834384	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs560784948	chr11:93834392-93834393	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs142611571	chr11:93834393-93834394	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs546826637	chr11:93834395-93834396	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs61729655	chr11:93834419-93834420	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs557312405	chr11:93834426-93834427	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs575463398	chr11:93834427-93834428	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs376584379	chr11:93834428-93834429	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs369581710	chr11:93834448-93834449	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs183055770	chr11:93834464-93834465	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs373490740	chr11:93834489-93834490	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs375999989	chr11:93834493-93834494	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs369131500	chr11:93834506-93834507	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs551015385	chr11:93834525-93834526	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs75992276	chr11:93834547-93834548	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs376674249	chr11:93834548-93834549	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs187726584	chr11:93834562-93834563	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs555277421	chr11:93834629-93834630	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs150969263	chr11:93834678-93834679	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs140749994	chr11:93834742-93834743	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs558846876	chr11:93834816-93834817	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs577672222	chr11:93834823-93834824	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs371090408	chr11:93834853-93834854	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs370459492	chr11:93834994-93834995	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs535889882	chr11:93835009-93835010	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs191303653	chr11:93835043-93835044	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs374442650	chr11:93835090-93835091	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs76892857	chr11:93835103-93835104	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs150089776	chr11:93835262-93835263	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs542541059	chr11:93835270-93835271	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs369173413	chr11:93835351-93835352	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs113293197	chr11:93835363-93835364	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs547347042	chr11:93835378-93835379	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs4408267	chr11:93835395-93835396	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs72968759	chr11:93835453-93835454	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs564902093	chr11:93835474-93835475	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs532652778	chr11:93835486-93835487	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs371141607	chr11:93835549-93835550	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs576439262	chr11:93835583-93835584	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs374551637	chr11:93835595-93835596	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs537217894	chr11:93835599-93835600	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs551076777	chr11:93835619-93835620	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs77962961	chr11:93835677-93835678	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs76238863	chr11:93835721-93835722	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs113540312	chr11:93835757-93835758	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Mental retardation	21062444	CNVD
Cancer	21499728	CNVD
Breast cancer	19181860	CNVD
Breast cancer	17603634	CNVD
Mantle cell lymphoma	19029149	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Breast cancer	21509527	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	18852474	CNVD
Breast cancer	22844521	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:949 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93833200-93834600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:93833200-93841000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr11:93833400-93834600	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr11:93833400-93834600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr11:93833400-93834600	Enhancers	HMEC	breast
6	chr11:93833400-93834800	Enhancers	NHEK	skin
7	chr11:93833800-93835600	Weak transcription	Fetal Intestine Large	intestine
8	chr11:93834600-93835600	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr11:93834600-93837400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr11:93834600-93837800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr11:93834600-93837800	Weak transcription	HMEC	breast
12	chr11:93834800-93837800	Weak transcription	NHEK	skin
13	chr11:93835200-93836400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
14	chr11:93835600-93836400	Enhancers	Fetal Intestine Large	intestine
15	chr11:93835600-93837000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr11:93836200-93836400	Enhancers	Duodenum Mucosa	Duodenum
17	chr11:93836400-93838400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr11:93836600-93837200	Weak transcription	Duodenum Mucosa	Duodenum
19	chr11:93837000-93840200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr11:93837200-93837400	Enhancers	Duodenum Mucosa	Duodenum
21	chr11:93837400-93838200	Weak transcription	Duodenum Mucosa	Duodenum
22	chr11:93837400-93838600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr11:93837800-93838600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr11:93837800-93838600	Enhancers	NHEK	skin
25	chr11:93837800-93838800	Enhancers	HMEC	breast
26	chr11:93838400-93838600	Enhancers	Duodenum Mucosa	Duodenum
27	chr11:93838400-93838800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
28	chr11:93838600-93845000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr11:93838600-93845000	Weak transcription	NHEK	skin
30	chr11:93838800-93839200	Enhancers	HUES48 Cell Line	embryonic stem cell
31	chr11:93838800-93839200	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr11:93838800-93839400	Enhancers	HUES64 Cell Line	embryonic stem cell
33	chr11:93838800-93844800	Weak transcription	HMEC	breast
34	chr11:93839000-93839400	Enhancers	iPS-15b Cell Line	embryonic stem cell
35	chr11:93839800-93840200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr11:93840000-93840400	Enhancers	HSMMtube	muscle
37	chr11:93840200-93843200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr11:93840200-93845000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr11:93840400-93844600	Weak transcription	HSMMtube	muscle
40	chr11:93843000-93845000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
41	chr11:93843200-93844200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr11:93843400-93860600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
43	chr11:93844200-93845200	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr11:93844400-93845000	Enhancers	Brain Cingulate Gyrus	brain
45	chr11:93844400-93845000	Enhancers	HSMM	muscle
46	chr11:93844400-93846600	Enhancers	Stomach Smooth Muscle	stomach
47	chr11:93844400-93846800	Enhancers	Rectal Smooth Muscle	rectum
48	chr11:93844600-93845200	Enhancers	HSMMtube	muscle
49	chr11:93844600-93846400	Enhancers	Colon Smooth Muscle	Colon
50	chr11:93844600-93846600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links