Variant report

Variant nsv523593
Chromosome Location chr5:104090636-104254580
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:150 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:104089600-104090800 Enhancers Cortex derived primary cultured neurospheres brain
2 chr5:104089800-104091200 Enhancers ES-I3 Cell Line embryonic stem cell
3 chr5:104089800-104091200 Enhancers HUES48 Cell Line embryonic stem cell
4 chr5:104089800-104091200 Enhancers iPS-15b Cell Line embryonic stem cell
5 chr5:104089800-104091200 Enhancers iPS-18 Cell Line embryonic stem cell
6 chr5:104089800-104091400 Enhancers HUES64 Cell Line embryonic stem cell
7 chr5:104090200-104091000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
8 chr5:104090400-104090800 Active TSS HUES6 Cell Line embryonic stem cell
9 chr5:104090600-104090800 Active TSS iPS-20b Cell Line embryonic stem cell
10 chr5:104090800-104091000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
11 chr5:104091200-104092600 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr5:104091400-104095000 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr5:104095000-104095800 Enhancers HUES64 Cell Line embryonic stem cell
14 chr5:104112400-104113000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
15 chr5:104112600-104113000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr5:104124800-104125400 Enhancers Duodenum Smooth Muscle Duodenum
17 chr5:104124800-104125400 Enhancers Rectal Smooth Muscle rectum
18 chr5:104124800-104125600 Enhancers Fetal Lung lung
19 chr5:104124800-104126400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:104126400-104130000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr5:104127800-104129000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr5:104128400-104129800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr5:104128600-104129000 Enhancers Fetal Intestine Small intestine
24 chr5:104128600-104129000 Enhancers Sigmoid Colon Sigmoid Colon
25 chr5:104128600-104129200 Enhancers Rectal Mucosa Donor 31 rectum
26 chr5:104128600-104129400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr5:104128600-104129400 Enhancers Rectal Mucosa Donor 29 rectum
28 chr5:104128600-104130000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
29 chr5:104128600-104130200 Enhancers Fetal Intestine Large intestine
30 chr5:104128800-104129200 Enhancers NH-A brain
31 chr5:104129000-104129400 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
32 chr5:104129000-104129400 Enhancers iPS-18 Cell Line embryonic stem cell
33 chr5:104129200-104129400 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
34 chr5:104129200-104130000 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr5:104130000-104130200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
36 chr5:104130000-104130200 Enhancers Rectal Mucosa Donor 31 rectum
37 chr5:104130000-104132000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr5:104136200-104136400 ZNF genes & repeats Aorta Aorta
39 chr5:104137600-104138400 Enhancers Rectal Mucosa Donor 31 rectum
40 chr5:104150800-104151200 Enhancers Pancreatic Islets Pancreatic Islet
41 chr5:104151200-104154800 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr5:104157200-104157800 Enhancers Fetal Intestine Large intestine
43 chr5:104157200-104159600 Enhancers Fetal Intestine Small intestine
44 chr5:104173200-104173400 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr5:104173200-104173400 Enhancers HUES48 Cell Line embryonic stem cell
46 chr5:104173200-104173400 Enhancers HUES6 Cell Line embryonic stem cell
47 chr5:104173200-104173400 Enhancers HUES64 Cell Line embryonic stem cell
48 chr5:104173200-104173400 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr5:104173200-104173400 Enhancers iPS-20b Cell Line embryonic stem cell
50 chr5:104173400-104179600 Weak transcription iPS-20b Cell Line embryonic stem cell

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