Variant report

Variant	nsv524368
Chromosome Location	chr10:110459019-110460232
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 57 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:57 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11194230	chr10:110459019-110459020	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs115465260	chr10:110459022-110459023	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs530940690	chr10:110459031-110459032	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs550727182	chr10:110459033-110459034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs560893180	chr10:110459077-110459078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs143646081	chr10:110459094-110459095	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs138427928	chr10:110459119-110459120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs191813835	chr10:110459135-110459136	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs568858892	chr10:110459175-110459176	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs184103242	chr10:110459190-110459191	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs113867646	chr10:110459205-110459206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs568919249	chr10:110459270-110459271	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs113560055	chr10:110459335-110459336	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs187413492	chr10:110459348-110459349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs574110033	chr10:110459352-110459353	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs551663998	chr10:110459391-110459392	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs79577567	chr10:110459449-110459450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs566815930	chr10:110459458-110459459	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs536855654	chr10:110459463-110459464	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs112741850	chr10:110459472-110459473	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs192101950	chr10:110459489-110459490	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs545402483	chr10:110459523-110459524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs559017323	chr10:110459531-110459532	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs200064521	chr10:110459558-110459559	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs59423847	chr10:110459559-110459560	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs529228884	chr10:110459566-110459567	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs373061906	chr10:110459576-110459577	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs375794386	chr10:110459597-110459598	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs139247740	chr10:110459620-110459621	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs375435812	chr10:110459639-110459640	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs12255930	chr10:110459642-110459643	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs143170059	chr10:110459666-110459667	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs112300138	chr10:110459692-110459693	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs568723695	chr10:110459721-110459722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs531345066	chr10:110459743-110459744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs547929070	chr10:110459757-110459758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs78952546	chr10:110459780-110459781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs547769511	chr10:110459806-110459807	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs368815561	chr10:110459827-110459828	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs114438542	chr10:110459871-110459872	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs538695212	chr10:110459892-110459893	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs567146156	chr10:110459938-110459939	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs139408140	chr10:110459939-110459940	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs10884683	chr10:110459956-110459957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs575510686	chr10:110460030-110460031	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs149673934	chr10:110460036-110460037	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs184699946	chr10:110460085-110460086	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs574917796	chr10:110460100-110460101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs199595177	chr10:110460104-110460105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs71479222	chr10:110460107-110460108	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Paraganglioma	17535989	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	16573809	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
renal hypoplasia	20603712	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Myxofibrosarcoma	16751306	CNVD
Cornelia de Lange syndrome	24599119	CNVD
T-cell lymphomas	19863542	CNVD
Breast cancer	16397240	CNVD
Urothelial carcinoma	21177765	CNVD
Multiple myeloma	16616336	CNVD
Chronic lymphocytic leukemia	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21364760	CNVD
Barrett''s syndrome	19417022	CNVD
Sezary syndrome	18413736	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:110457800-110472400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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