Variant report

Variant	nsv524400
Chromosome Location	chr11:5328361-5416622
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:5357702-5357843	K562	blood:	n/a	n/a
2	ARID3A	chr11:5356414-5356825	K562	blood:	n/a	n/a
3	ATF1	chr11:5356441-5356789	K562	blood:	n/a	n/a
4	BACH1	chr11:5401821-5401831	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr11:5385003-5385179	K562	blood:	n/a	n/a
6	BHLHE40	chr11:5383352-5383583	K562	blood:	n/a	n/a
7	CCNT2	chr11:5356334-5356762	K562	blood:	n/a	n/a
8	CEBPB	chr11:5385420-5385826	Hela-S3	cervix:	n/a	n/a
9	CEBPB	chr11:5386039-5386374	Hela-S3	cervix:	n/a	n/a
10	CEBPB	chr11:5338612-5338810	H1-hESC	embryonic stem cell:	n/a	n/a
11	CEBPB	chr11:5370798-5371166	IMR90	lung:	n/a	chr11:5370968-5370979 chr11:5370969-5370980
12	CEBPB	chr11:5401412-5401568	K562	blood:	n/a	n/a
13	CEBPB	chr11:5331668-5332018	HepG2	liver:	n/a	chr11:5331847-5331858
14	CEBPB	chr11:5410351-5410419	K562	blood:	n/a	n/a
15	CEBPB	chr11:5336886-5337386	HepG2	liver:	n/a	n/a
16	CEBPB	chr11:5364706-5365364	Hela-S3	cervix:	n/a	n/a
17	CEBPB	chr11:5370799-5371155	K562	blood:	n/a	chr11:5370968-5370979 chr11:5370969-5370980
18	CEBPB	chr11:5388544-5389262	IMR90	lung:	n/a	chr11:5389054-5389065
19	CEBPB	chr11:5370814-5371155	HepG2	liver:	n/a	chr11:5370968-5370979 chr11:5370969-5370980
20	CEBPB	chr11:5370787-5371131	H1-hESC	embryonic stem cell:	n/a	chr11:5370968-5370979 chr11:5370969-5370980
21	CEBPB	chr11:5338608-5338786	K562	blood:	n/a	n/a
22	CEBPB	chr11:5386068-5386362	IMR90	lung:	n/a	n/a
23	CEBPB	chr11:5331680-5332046	K562	blood:	n/a	chr11:5331847-5331858
24	CEBPB	chr11:5370851-5371108	A549	lung:	n/a	chr11:5370968-5370979 chr11:5370969-5370980
25	CEBPB	chr11:5366981-5367506	Hela-S3	cervix:	n/a	n/a
26	CEBPB	chr11:5370798-5371158	Hela-S3	cervix:	n/a	chr11:5370968-5370979 chr11:5370969-5370980
27	CEBPB	chr11:5331687-5331998	Hela-S3	cervix:	n/a	chr11:5331847-5331858
28	CEBPB	chr11:5331805-5331885	H1-hESC	embryonic stem cell:	n/a	chr11:5331847-5331858
29	CEBPB	chr11:5388805-5389232	Hela-S3	cervix:	n/a	chr11:5389054-5389065
30	CEBPB	chr11:5331664-5332021	IMR90	lung:	n/a	chr11:5331847-5331858
31	CEBPB	chr11:5331708-5331994	A549	lung:	n/a	chr11:5331847-5331858
32	CEBPD	chr11:5356445-5356853	K562	blood:	n/a	n/a
33	CTCF	chr11:5401981-5402277	A549	lung:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173
34	CTCF	chr11:5401905-5402381	GM12878	blood:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173
35	CTCF	chr11:5387560-5387710	RPTEC	kidney:	n/a	n/a
36	CTCF	chr11:5387580-5387730	GM12875	blood:	n/a	n/a
37	CTCF	chr11:5402100-5402250	GM12869	blood:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173
38	CTCF	chr11:5402120-5402270	K562	blood:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173
39	CTCF	chr11:5411420-5411570	NHLF	lung:	n/a	n/a
40	CTCF	chr11:5391220-5391370	GM12868	blood:	n/a	chr11:5391286-5391307
41	CTCF	chr11:5402032-5402301	K562	blood:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173
42	CTCF	chr11:5401971-5402373	H1-hESC	embryonic stem cell:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173
43	CTCF	chr11:5402056-5402274	H1-hESC	embryonic stem cell:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173
44	CTCF	chr11:5402005-5402331	Gliobla	brain:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173
45	CTCF	chr11:5411580-5411730	HCPEpiC	choroid plexus:	n/a	n/a
46	CTCF	chr11:5387580-5387730	AG04449	skin:	n/a	n/a
47	CTCF	chr11:5411580-5411730	HFF-Myc	foreskin:	n/a	n/a
48	CTCF	chr11:5402100-5402250	HL-60	blood:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173
49	CTCF	chr11:5391190-5391409	LNCaP	prostate:	n/a	chr11:5391286-5391307
50	CTCF	chr11:5402030-5402303	MCF-7	breast:	n/a	chr11:5402153-5402174 chr11:5402159-5402175 chr11:5402161-5402171 chr11:5402164-5402173 chr11:5402158-5402176 chr11:5402160-5402173

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:5408788-5408838	CMK	blood:	n/a
2	chr11:5408788-5408838	CMK	blood:	n/a
3	chr11:5364833-5364883	HCM	heart:	n/a
4	chr11:5365377-5365427	HCPEpiC	choroid plexus:	n/a
5	chr11:5372944-5372994	Hela-S3	cervix:	n/a
6	chr11:5372944-5372994	GM19239	blood:	n/a
7	chr11:5345105-5345155	AG09309	skin:	n/a
8	chr11:5345105-5345155	NB4	blood:	n/a
9	chr11:5345539-5345589	GM12892	blood:	n/a
10	chr11:5355684-5355734	MCF-7	breast:	n/a
11	chr11:5410053-5410103	BE2_C	brain:	n/a
12	chr11:5345105-5345155	AG04450	lung:	fetal
13	chr11:5364972-5365022	BE2_C	brain:	n/a
14	chr11:5345539-5345589	Hela-S3	cervix:	n/a
15	chr11:5364972-5365022	HCF	heart:	n/a
16	chr11:5372944-5372994	PFSK-1	brain:	n/a
17	chr11:5372503-5372553	HRE	kidney:	n/a
18	chr11:5408788-5408838	HRCEpiC	kidney:	n/a
19	chr11:5355684-5355734	HL-60	blood:	n/a
20	chr11:5345105-5345155	HUVEC	blood vessel:	n/a
21	chr11:5365377-5365427	HL-60	blood:	n/a
22	chr11:5346163-5346213	GM12892	blood:	n/a
23	chr11:5372944-5372994	HIPEpiC	eye:	n/a
24	chr11:5364972-5365022	NB4	blood:	n/a
25	chr11:5410452-5410502	HRPEpiC	eye:	n/a
26	chr11:5410053-5410103	HepG2	liver:	n/a
27	chr11:5410452-5410502	NHBE	bronchial:	n/a
28	chr11:5346163-5346213	HL-60	blood:	n/a
29	chr11:5364972-5365022	GM12878	blood:	n/a
30	chr11:5408788-5408838	GM06990	blood:	n/a
31	chr11:5346163-5346213	MCF10A-Er-Src	breast:	n/a
32	chr11:5408788-5408838	PFSK-1	brain:	n/a
33	chr11:5364833-5364883	Caco-2	colon:	n/a
34	chr11:5345539-5345589	K562	blood:	n/a
35	chr11:5372503-5372553	ProgFib	skin:	n/a
36	chr11:5345105-5345155	HPAEpiC	pulmonary alveolar:	n/a
37	chr11:5372944-5372994	Hepatocyte	liver:	n/a
38	chr11:5364972-5365022	ECC-1	luminal epithelium:	n/a
39	chr11:5345539-5345589	Hepatocyte	liver:	n/a
40	chr11:5410053-5410103	AG04449	skin:	fetal
41	chr11:5365377-5365427	HUVEC	blood vessel:	n/a
42	chr11:5410452-5410502	NH-A	brain:	n/a
43	chr11:5410452-5410502	T-47D	breast:	n/a
44	chr11:5345539-5345589	HCM	heart:	n/a
45	chr11:5384517-5384567	SAEC	small airway:	n/a
46	chr11:5345539-5345589	AG04450	lung:	fetal
47	chr11:5345539-5345589	HRPEpiC	eye:	n/a
48	chr11:5372944-5372994	NHDF-neo	bronchial:	n/a
49	chr11:5364972-5365022	HAEpiC	amniotic membrane:	n/a
50	chr11:5346163-5346213	AG04449	skin:	fetal

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:5382283..5382803-chr11:62608622..62609624,4	MCF-7	breast:
2	chr11:5384124..5385767-chr11:5387283..5389565,2	K562	blood:
3	11:5250847-5268367..11:5406514-5407716	Hela-S3	cervix:
4	11:5250847-5268367..11:5380014-5384338	H1-hESC	embryonic stem cell:	embryo
5	chr11:5382283..5382803-chr11:62608619..62609221,11	HCT-116	colon:
6	chr11:5381283..5382803-chr3:73159067..73161609,3	K562	blood:
7	11:5018576-5020673..11:5333905-5335774	H1-hESC	embryonic stem cell:	embryo
8	chr11:5384124..5385767-chr11:5387283..5389565,2	K562	blood:
9	chr11:5381283..5382803-chr17:41380385..41382126,2	K562	blood:
10	chr11:5145386..5146091-chr11:5401599..5402243,2	K562	blood:
11	chr11:5405070..5407795-chr11:5524807..5526877,2	K562	blood:
12	11:4789513-4794705..11:5357148-5363591	GM12878	blood:
13	chr11:4657985..4658755-chr11:5391194..5391750,2	MCF-7	breast:
14	chr11:5381283..5382783-chr17:41380312..41381821,2	MCF-7	breast:
15	chr11:5385575..5387754-chr11:5392449..5394884,2	K562	blood:
16	chr11:5403286..5405023-chr11:5406097..5408561,2	K562	blood:
17	chr11:5415584..5416428-chr20:41864268..41865032,2	MCF-7	breast:
18	11:5243048-5250847..11:5333905-5335774	Hela-S3	cervix:
19	11:5356671-5357148..11:5363591-5368290	K562	blood:
20	chr11:5350338..5352492-chr11:5354713..5357213,2	K562	blood:
21	chr11:5403316..5405023-chr11:5406492..5408561,2	K562	blood:
22	11:4778081-4789138..11:5357148-5363591	GM12878	blood:
23	chr11:5350338..5353264-chr11:5354809..5357338,4	K562	blood:
24	chr11:5413872..5415694-chr11:5419975..5421750,2	K562	blood:
25	11:5146608-5154908..11:5349791-5355747	K562	blood:
26	chr11:5381283..5382783-chr17:41464201..41465702,2	MCF-7	breast:
27	chr11:5381283..5382783-chr17:41380573..41383525,2	MCF-7	breast:
28	11:5398331-5406514..11:5527719-5533869	H1-hESC	embryonic stem cell:	embryo
29	chr11:5382283..5382803-chr3:73159935..73160621,4	MCF-7	breast:
30	chr11:5382303..5383283-chr3:73159952..73160632,4	NB4	blood:
31	chr11:5145230..5145917-chr11:5402049..5402594,2	MCF-7	breast:
32	chr11:5350338..5352492-chr11:5354713..5357213,2	K562	blood:
33	chr1:212997378..212997898-chr11:5382283..5382803,2	HCT-116	colon:
34	chr11:5381283..5382803-chr3:73159944..73161618,3	MCF-7	breast:
35	11:5218976-5222789..11:5398331-5406514	GM12878	blood:
36	chr11:5362669..5364774-chr11:5370667..5373143,2	K562	blood:
37	chr11:5369590..5371367-chr11:5374637..5376973,2	K562	blood:
38	11:4900708-4903421..11:5333905-5335774	Hela-S3	cervix:
39	chr11:5145037..5145858-chr11:5401710..5402214,2	MCF-7	breast:
40	chr11:5381283..5382803-chr17:41398716..41402368,7	K562	blood:
41	chr11:5365752..5367292-chr11:5371072..5372719,2	K562	blood:
42	11:5333905-5335774..11:5407716-5412355	H1-hESC	embryonic stem cell:	embryo
43	11:5398331-5406514..11:5700314-5707362	GM12878	blood:
44	11:5018576-5020673..11:5398331-5406514	H1-hESC	embryonic stem cell:	embryo
45	chr11:5402054..5402614-chr11:5441811..5442439,2	MCF-7	breast:
46	chr11:5382283..5383303-chr3:73159935..73160633,6	HCT-116	colon:
47	chr11:5359938..5361655-chr11:5372611..5374311,2	K562	blood:
48	11:5243048-5250847..11:5357148-5363591	Hela-S3	cervix:
49	11:5357148-5363591..11:5721056-5732713	K562	blood:
50	chr11:5382283..5382803-chr18:21285383..21285903,2	Hela-S3	cervix:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HBE1-1	chr11:5361768-5362592	ENSG00000167355.3
2	lnc-HBE1-1	chr11:5368106-5368140	ENSG00000167355.3
3	lnc-OR51B6-2	chr11:5383845-5384079	NONHSAT017681
4	lnc-HBE1-1	chr11:5367492-5367583	ENSG00000167355.3
5	lnc-HBE1-1	chr11:5367003-5367129	NR_038321
6	lnc-HBE1-1	chr11:5362397-5362592	ENSG00000167355.3
7	lnc-HBE1-1	chr11:5367003-5367129	ENSG00000167355.3
8	lnc-HBE1-1	chr11:5367003-5367129	ENSG00000167355.3
9	lnc-HBE1-1	chr11:5367492-5367583	ENSG00000167355.3
10	lnc-HBE1-1	chr11:5368106-5368140	NR_038321
11	lnc-HBE1-1	chr11:5367492-5367583	NR_038321
12	lnc-HBE1-1	chr11:5368106-5368140	ENSG00000167355.3
13	lnc-HBE1-1	chr11:5367003-5367129	ENSG00000167355.3
14	lnc-HBE1-1	chr11:5362113-5362592	NR_038321
15	lnc-HBE1-1	chr11:5368106-5368140	ENSG00000167355.3
16	lnc-HBE1-1	chr11:5367492-5367583	ENSG00000167355.3

Variant related genes	Relation type
ENSG00000230087	TF binding region
OR51B8P	TF binding region
OR51M1	TF binding region
ENSG00000236248	TF binding region
OR51B5	TF binding region
OR51B2	TF binding region
OR51B3P	TF binding region
OR51B6	TF binding region
ENSG00000230087	CpG island
OR51B8P	CpG island
OR51M1	CpG island
ENSG00000236248	CpG island
OR51B5	CpG island
OR51B2	CpG island
OR51B3P	CpG island
OR51B6	CpG island
ENSG00000188825	chromatin interactions
ENSG00000223247	chromatin interactions
ENSG00000223735	chromatin interactions
ENSG00000236359	chromatin interactions
ENSG00000230087	chromatin interactions
ENSG00000196565	chromatin interactions
ENSG00000176900	chromatin interactions
ENSG00000175520	chromatin interactions
ENSG00000171944	chromatin interactions
ENSG00000258588	chromatin interactions
ENSG00000229988	chromatin interactions
ENSG00000222414	chromatin interactions
ENSG00000260629	chromatin interactions
ENSG00000205494	chromatin interactions
ENSG00000184881	chromatin interactions
ENSG00000213931	chromatin interactions
ENSG00000121236	chromatin interactions
ENSG00000188069	chromatin interactions
ENSG00000176239	chromatin interactions
ENSG00000224300	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000184698	chromatin interactions
ENSG00000204950	chromatin interactions
ENSG00000244734	chromatin interactions
ENSG00000242180	chromatin interactions
ENSG00000176742	chromatin interactions
ENSG00000221031	chromatin interactions
ENSG00000167355	chromatin interactions
ENSG00000224091	chromatin interactions
ENSG00000132256	chromatin interactions
ENSG00000176798	chromatin interactions
ENSG00000167346	chromatin interactions
ENSG00000132274	chromatin interactions
ENSG00000223609	chromatin interactions
ENSG00000236383	chromatin interactions
ENSG00000187918	chromatin interactions

Extended variants
information (count: 4951 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:4951 , 50 per page) page: 1 2 3 4 5 6 7 ... 100

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3898917	chr11:5328361-5328362	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs189764267	chr11:5328403-5328404	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs7946626	chr11:5328412-5328413	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs530197330	chr11:5328413-5328414	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs3898916	chr11:5328420-5328421	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
6	rs531163886	chr11:5328427-5328428	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs537790687	chr11:5328437-5328438	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs140569333	chr11:5328444-5328445	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs367626143	chr11:5328489-5328490	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs570853033	chr11:5328537-5328538	Enhancers Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs367953525	chr11:5328608-5328609	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs181019058	chr11:5328628-5328629	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs553473046	chr11:5328646-5328647	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs575011662	chr11:5328647-5328648	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs542001214	chr11:5328682-5328683	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs557129696	chr11:5328683-5328684	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs186149697	chr11:5328689-5328690	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs191870290	chr11:5328694-5328695	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs10082566	chr11:5328707-5328708	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs184090289	chr11:5328797-5328798	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs554889431	chr11:5328800-5328801	Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs117111803	chr11:5328816-5328817	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs35837359	chr11:5328846-5328847	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs201958577	chr11:5328861-5328862	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs61894567	chr11:5328862-5328863	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs200243832	chr11:5328864-5328865	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs141834901	chr11:5328866-5328867	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs368858815	chr11:5328869-5328870	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs12272009	chr11:5328870-5328871	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs371410443	chr11:5328881-5328882	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs147364132	chr11:5328882-5328883	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs201664857	chr11:5328883-5328884	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs78702275	chr11:5328885-5328886	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs28414678	chr11:5328888-5328889	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs372795946	chr11:5328899-5328900	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs111539148	chr11:5328901-5328902	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs200716978	chr11:5328909-5328910	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs75272360	chr11:5328914-5328915	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs28538134	chr11:5328924-5328925	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs7935416	chr11:5328931-5328932	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs533690492	chr11:5328936-5328937	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs201920462	chr11:5328957-5328958	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs200103758	chr11:5328958-5328959	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs200583563	chr11:5328967-5328968	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs28384256	chr11:5328988-5328989	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs9665941	chr11:5328995-5328996	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs564898983	chr11:5328996-5328997	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs561416990	chr11:5329012-5329013	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs549294375	chr11:5329051-5329052	Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs548452104	chr11:5329123-5329124	Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Neuroblastoma	18923191	CNVD
Breast cancer	19432969	CNVD
Alzheimer''s disease	17576883	CNVD
Long-qt syndrome	17576883	CNVD
Emphysema	19352772	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Chordoma	18071362	CNVD
Breast cancer	16608533	CNVD
Cancer	21183584	CNVD
Gastric adenocarcinoma	19115996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Barrett''s syndrome	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Myelofibrosis	22110671	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Neuroblastoma	21124317	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Schizophrenia	21399695	CNVD
Gastric cancer	16891809	CNVD
Cancer	17160897	CNVD
Multiple myeloma	16616336	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD
Autism	20531469	CNVD

Chromatin state (count:210 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:5325800-5330400	Strong transcription	K562	blood
2	chr11:5327200-5328800	Enhancers	NHDF-Ad	bronchial
3	chr11:5328000-5328600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:5330400-5345000	Weak transcription	K562	blood
5	chr11:5345000-5345600	Strong transcription	K562	blood
6	chr11:5345400-5352000	Weak transcription	Aorta	Aorta
7	chr11:5345600-5351800	Weak transcription	K562	blood
8	chr11:5351800-5352600	Strong transcription	K562	blood
9	chr11:5352000-5352200	ZNF genes & repeats	Aorta	Aorta
10	chr11:5352200-5353600	Weak transcription	Aorta	Aorta
11	chr11:5352600-5355200	Weak transcription	K562	blood
12	chr11:5354200-5356800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr11:5354800-5355400	Enhancers	NHDF-Ad	bronchial
14	chr11:5354800-5356800	Enhancers	Osteobl	bone
15	chr11:5355000-5355600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr11:5355000-5357600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr11:5355200-5356600	Enhancers	K562	blood
18	chr11:5355400-5357400	Weak transcription	NHDF-Ad	bronchial
19	chr11:5355600-5355800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr11:5355800-5356200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr11:5356000-5356800	Enhancers	Fetal Lung	lung
22	chr11:5356600-5357000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr11:5356600-5357000	Flanking Active TSS	K562	blood
24	chr11:5356800-5364000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr11:5357000-5358600	Enhancers	K562	blood
26	chr11:5357000-5361200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr11:5357400-5357800	Enhancers	NHDF-Ad	bronchial
28	chr11:5357600-5357800	Flanking Active TSS	HSMMtube	muscle
29	chr11:5358600-5359000	Weak transcription	K562	blood
30	chr11:5359000-5359200	Enhancers	K562	blood
31	chr11:5359200-5360400	Weak transcription	K562	blood
32	chr11:5360400-5368200	Strong transcription	K562	blood
33	chr11:5361200-5361600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr11:5362400-5362600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr11:5364000-5365400	Enhancers	Hela-S3	cervix
36	chr11:5364000-5367600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr11:5364600-5365200	Enhancers	NH-A	brain
38	chr11:5364600-5367600	Enhancers	Osteobl	bone
39	chr11:5364800-5365400	Enhancers	HUES48 Cell Line	embryonic stem cell
40	chr11:5364800-5366000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr11:5365000-5365400	Enhancers	ES-I3 Cell Line	embryonic stem cell
42	chr11:5365000-5365600	Enhancers	iPS-20b Cell Line	embryonic stem cell
43	chr11:5365200-5365600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr11:5365400-5366800	Weak transcription	Hela-S3	cervix
45	chr11:5365400-5369600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr11:5365400-5369600	Weak transcription	HUES48 Cell Line	embryonic stem cell
47	chr11:5365600-5369600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
48	chr11:5365600-5382600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr11:5366000-5367200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr11:5366800-5367600	Enhancers	Hela-S3	cervix

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