Variant report

Variant	nsv525188
Chromosome Location	chr1:77655651-77695854
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:573)
CpG islands
(count:671)
Chromatin interactive
region (count:24)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:573 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:77684172-77684460	K562	blood:	n/a	n/a
2	ARID3A	chr1:77684893-77685652	K562	blood:	n/a	n/a
3	ARID3A	chr1:77685466-77685797	HepG2	liver:	n/a	n/a
4	ATF2	chr1:77684775-77685330	GM12878	blood:	n/a	n/a
5	ATF3	chr1:77685043-77685293	GM12878	blood:	n/a	n/a
6	ATF3	chr1:77684945-77685283	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF3	chr1:77684926-77685251	HepG2	liver:	n/a	n/a
8	ATF3	chr1:77684877-77685303	GM12878	blood:	n/a	n/a
9	ATF3	chr1:77684909-77685300	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF3	chr1:77684887-77685287	K562	blood:	n/a	n/a
11	BHLHE40	chr1:77663959-77664043	GM12878	blood:	n/a	n/a
12	BHLHE40	chr1:77684666-77685365	GM12878	blood:	n/a	n/a
13	BHLHE40	chr1:77684646-77685267	K562	blood:	n/a	n/a
14	BRCA1	chr1:77684238-77685332	Hela-S3	cervix:	n/a	n/a
15	CBX3	chr1:77669841-77670055	K562	blood:	n/a	n/a
16	CBX3	chr1:77669783-77670105	K562	blood:	n/a	n/a
17	CBX3	chr1:77684888-77685319	K562	blood:	n/a	n/a
18	CCNT2	chr1:77684886-77685269	K562	blood:	n/a	n/a
19	CEBPB	chr1:77685000-77685308	IMR90	lung:	n/a	n/a
20	CEBPB	chr1:77684493-77685370	Hela-S3	cervix:	n/a	chr1:77684503-77684516
21	CEBPB	chr1:77675454-77675526	K562	blood:	n/a	n/a
22	CEBPB	chr1:77661555-77661636	HepG2	liver:	n/a	n/a
23	CEBPB	chr1:77684905-77685275	K562	blood:	n/a	n/a
24	CEBPB	chr1:77684844-77685415	GM12878	blood:	n/a	n/a
25	CEBPB	chr1:77686413-77686747	A549	lung:	n/a	n/a
26	CEBPB	chr1:77685005-77685313	HepG2	liver:	n/a	n/a
27	CEBPB	chr1:77684998-77685272	H1-hESC	embryonic stem cell:	n/a	n/a
28	CEBPB	chr1:77686365-77686777	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr1:77662914-77663269	Hela-S3	cervix:	n/a	n/a
30	CEBPB	chr1:77684986-77685282	A549	lung:	n/a	n/a
31	CEBPB	chr1:77662923-77663240	IMR90	lung:	n/a	n/a
32	CEBPB	chr1:77662932-77663203	A549	lung:	n/a	n/a
33	CEBPB	chr1:77684971-77685335	K562	blood:	n/a	n/a
34	CEBPB	chr1:77662915-77663277	HepG2	liver:	n/a	n/a
35	CEBPB	chr1:77686337-77686744	IMR90	lung:	n/a	n/a
36	CEBPD	chr1:77684819-77685421	K562	blood:	n/a	n/a
37	CEBPD	chr1:77684904-77685337	HepG2	liver:	n/a	n/a
38	CHD1	chr1:77684700-77685288	GM12878	blood:	n/a	n/a
39	CHD1	chr1:77684827-77685690	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD2	chr1:77684842-77685124	K562	blood:	n/a	n/a
41	CHD2	chr1:77684834-77685288	GM12878	blood:	n/a	n/a
42	CHD2	chr1:77684380-77685340	Hela-S3	cervix:	n/a	n/a
43	CHD2	chr1:77684902-77685180	HepG2	liver:	n/a	n/a
44	CREB1	chr1:77684929-77685242	A549	lung:	n/a	n/a
45	CTCF	chr1:77684840-77684990	AG04449	skin:	n/a	n/a
46	CTCF	chr1:77684900-77685050	MCF-7	breast:	n/a	n/a
47	CTCF	chr1:77684840-77684990	SK-N-SH_RA	brain:	n/a	n/a
48	CTCF	chr1:77684780-77684930	HPAF	blood vessel:	n/a	n/a
49	CTCF	chr1:77684820-77684970	GM12875	blood:	n/a	n/a
50	CTCF	chr1:77684680-77684830	HCM	heart:	n/a	n/a

(count:671 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:77685251-77685301	GM12878	blood:	n/a
2	chr1:77688131-77688181	LNCaP	prostate:	n/a
3	chr1:77685094-77685144	AG09319	gingival:	n/a
4	chr1:77684965-77685015	Caco-2	colon:	n/a
5	chr1:77685150-77685200	HRPEpiC	eye:	n/a
6	chr1:77684965-77685015	RPTEC	kidney:	n/a
7	chr1:77685251-77685301	HUVEC	blood vessel:	n/a
8	chr1:77685135-77685185	H1-hESC	embryonic stem cell:	embryo
9	chr1:77685251-77685301	Hepatocyte	liver:	n/a
10	chr1:77685229-77685279	PrEC	prostate:	n/a
11	chr1:77685150-77685200	BE2_C	brain:	n/a
12	chr1:77688131-77688181	NB4	blood:	n/a
13	chr1:77688131-77688181	T-47D	breast:	n/a
14	chr1:77685094-77685144	GM12878	blood:	n/a
15	chr1:77685015-77685065	SAEC	small airway:	n/a
16	chr1:77685135-77685185	AG04450	lung:	fetal
17	chr1:77681561-77681611	Jurkat	blood:	n/a
18	chr1:77685094-77685144	HEEpiC	esophagus:	n/a
19	chr1:77684965-77685015	SKMC	muscle:	n/a
20	chr1:77685251-77685301	GM19239	blood:	n/a
21	chr1:77685135-77685185	Caco-2	colon:	n/a
22	chr1:77683411-77683461	GM19239	blood:	n/a
23	chr1:77685150-77685200	GM12878	blood:	n/a
24	chr1:77685135-77685185	LNCaP	prostate:	n/a
25	chr1:77685015-77685065	LNCaP	prostate:	n/a
26	chr1:77685015-77685065	HUVEC	blood vessel:	n/a
27	chr1:77681561-77681611	HCM	heart:	n/a
28	chr1:77681561-77681611	T-47D	breast:	n/a
29	chr1:77685150-77685200	SK-N-SH	brain:	n/a
30	chr1:77685135-77685185	GM12878	blood:	n/a
31	chr1:77685251-77685301	AG04449	skin:	fetal
32	chr1:77685135-77685185	PFSK-1	brain:	n/a
33	chr1:77685094-77685144	HPAEpiC	pulmonary alveolar:	n/a
34	chr1:77685094-77685144	Caco-2	colon:	n/a
35	chr1:77685094-77685144	Jurkat	blood:	n/a
36	chr1:77685229-77685279	GM06990	blood:	n/a
37	chr1:77685229-77685279	Hepatocyte	liver:	n/a
38	chr1:77685062-77685112	T-47D	breast:	n/a
39	chr1:77681561-77681611	AG10803	skin:	n/a
40	chr1:77685150-77685200	H1-hESC	embryonic stem cell:	embryo
41	chr1:77685135-77685185	GM12891	blood:	n/a
42	chr1:77685094-77685144	GM19239	blood:	n/a
43	chr1:77685135-77685185	AoSMC	blood vessel:	n/a
44	chr1:77685135-77685185	NH-A	brain:	n/a
45	chr1:77688131-77688181	SAEC	small airway:	n/a
46	chr1:77685251-77685301	A549	lung:	n/a
47	chr1:77685015-77685065	PrEC	prostate:	n/a
48	chr1:77685094-77685144	NB4	blood:	n/a
49	chr1:77685251-77685301	ovcar-3	ovarian:	n/a
50	chr1:77685135-77685185	BE2_C	brain:	n/a

(count:24 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:77656179..77658700-chr1:77659686..77662553,2	K562	blood:
2	chr1:77677708..77680059-chr1:77682131..77685030,3	K562	blood:
3	chr1:77677708..77680059-chr1:77682131..77685030,3	K562	blood:
4	chr1:77684564..77687850-chr1:77688271..77692443,7	K562	blood:
5	chr1:77673903..77675950-chr1:77678224..77680465,2	K562	blood:
6	chr1:77677424..77679474-chr1:77687776..77689660,2	K562	blood:
7	chr1:77661332..77664043-chr1:77683749..77686209,2	K562	blood:
8	chr1:77674234..77675786-chr1:77815270..77816932,2	K562	blood:
9	chr1:77684507..77685215-chr5:44808668..44809523,2	Hela-S3	cervix:
10	chr1:77668693..77669518-chr4:102182394..102183036,2	HCT-116	colon:
11	chr1:77679203..77681796-chr1:77682341..77684705,2	K562	blood:
12	chr1:77684670..77686781-chr1:77746398..77749229,3	MCF-7	breast:
13	chr1:77679203..77681796-chr1:77682341..77684705,2	K562	blood:
14	chr1:77679355..77682217-chr1:77684388..77686382,2	MCF-7	breast:
15	chr1:77667810..77669464-chr1:78468632..78471293,2	K562	blood:
16	chr1:77690590..77694353-chr1:77694495..77697779,4	K562	blood:
17	chr1:77669001..77671084-chr1:77671530..77674115,2	MCF-7	breast:
18	chr1:77677424..77679474-chr1:77687776..77689660,2	K562	blood:
19	chr1:77669001..77671084-chr1:77671530..77674115,2	MCF-7	breast:
20	chr1:77682598..77685827-chr1:77690810..77693587,3	K562	blood:
21	chr1:77690590..77694353-chr1:77694495..77697779,4	K562	blood:
22	chr1:77673903..77675950-chr1:77678224..77680465,2	K562	blood:
23	chr1:77676621..77679098-chr1:77684360..77686793,2	K562	blood:
24	chr1:77694564..77696510-chr1:77698043..77700950,2	K562	blood:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AK5-1	chr1:77686473-77686671	XLOC_000263
2	lnc-AK5-1	chr1:77686609-77686678	XLOC_000263
3	lnc-AK5-2	chr1:77692452-77694222	NONHSAT004025
4	lnc-AK5-1	chr1:77685227-77685338	XLOC_000263
5	lnc-AK5-1	chr1:77686286-77690011	NONHSAT004022
6	lnc-PIGK-3	chr1:77690411-77690647	NONHSAT004024
7	lnc-AK5-1	chr1:77686768-77686969	XLOC_000263

No data

Variant related genes	Relation type
PIGK	TF binding region
ENSG00000228187	TF binding region
PIGK	CpG island
ENSG00000228187	CpG island
ENSG00000162616	chromatin interactions
ENSG00000142892	chromatin interactions
ENSG00000228187	chromatin interactions
ENSG00000251141	chromatin interactions
ENSG00000112996	chromatin interactions
ENSG00000233099	chromatin interactions
ENSG00000273338	chromatin interactions
ENSG00000154027	chromatin interactions
RBM8A	miRNA target sites
RBM6	miRNA target sites

Extended variants
information (count: 1316 )
Associated
traits (count: 102 )

Variant overlapped rSNPs/rCNVs (count:1316 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2762882	chr1:77655651-77655652	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs569302630	chr1:77655664-77655665	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs60836923	chr1:77655680-77655681	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs72683932	chr1:77655692-77655693	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs529456604	chr1:77655795-77655796	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs187419679	chr1:77655856-77655857	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs191951102	chr1:77655938-77655939	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs1779182	chr1:77655950-77655951	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs576790842	chr1:77655963-77655964	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs148621254	chr1:77655987-77655988	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs549071483	chr1:77656051-77656052	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs556000659	chr1:77656124-77656125	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs574147892	chr1:77656148-77656149	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs12059517	chr1:77656159-77656160	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs559957611	chr1:77656210-77656211	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs571894540	chr1:77656274-77656275	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs141146457	chr1:77656297-77656298	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs564379594	chr1:77656301-77656302	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs532418687	chr1:77656336-77656337	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs377554012	chr1:77656412-77656413	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs550913899	chr1:77656416-77656417	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs562969927	chr1:77656438-77656439	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs577945019	chr1:77656456-77656457	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs370139699	chr1:77656493-77656494	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs530262084	chr1:77656567-77656568	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs150810786	chr1:77656581-77656582	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs376893879	chr1:77656586-77656587	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs139201775	chr1:77656592-77656593	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs552614995	chr1:77656618-77656619	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs79185517	chr1:77656646-77656647	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs537452776	chr1:77656653-77656654	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs74092446	chr1:77656720-77656721	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs375023840	chr1:77656722-77656723	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs551959205	chr1:77656768-77656769	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs146492577	chr1:77656824-77656825	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs553431688	chr1:77656882-77656883	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs17368950	chr1:77656887-77656888	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs545949354	chr1:77656890-77656891	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs557779114	chr1:77656913-77656914	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs576236827	chr1:77656927-77656928	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs143426430	chr1:77656953-77656954	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs139906827	chr1:77656984-77656985	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs574002867	chr1:77656989-77656990	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs184079684	chr1:77656998-77656999	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs530099531	chr1:77656999-77657000	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs542368894	chr1:77657025-77657026	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs560541620	chr1:77657026-77657027	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs543018031	chr1:77657030-77657031	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs527895084	chr1:77657037-77657038	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs552697599	chr1:77657069-77657070	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:102)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Colorectal cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Coronary Disease	20032323	CNVD
Prostate cancer	21965145	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Stargardt''s disease	17277736	CNVD
Neuroblastoma	17897457	CNVD
Uveal melanoma	21693616	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-syndromic sensorineural hearing loss	22290220	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	21264507	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	17387387	CNVD
Oligodendroglial tumors	17285580	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Neuroblastoma	17535989	CNVD
Pheochromocytoma	17535989	CNVD
Prostate cancer	16705090	CNVD
Astrocytoma	17934521	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Neuroblastoma	17533364	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21385341	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Chordoma	21602918	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Multiple myeloma	16461302	CNVD
Melanoma	17363583	CNVD
Cancer	21129771	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	20409316	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Rett syndrome	21593744	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Ovarian cancer	21720365	CNVD
Breast cancer	17133270	CNVD
Type 2 diabetes	21956041	CNVD
Uveal melanoma	20484589	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
lymphocytic leukemia	21291569	CNVD
Ewing''s sarcoma	17952124	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Poland''s syndrome	22110015	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioblastoma multiforme	21922591	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Cancer	22429812	CNVD
Effusion lymphoma	18079361	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:802 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:77616200-77663200	Weak transcription	Brain Hippocampus Middle	brain
2	chr1:77626000-77662600	Weak transcription	Thymus	Thymus
3	chr1:77626000-77684200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr1:77626800-77668000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
5	chr1:77626800-77674800	Weak transcription	Ovary	ovary
6	chr1:77626800-77676200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr1:77630800-77660600	Weak transcription	Left Ventricle	heart
8	chr1:77631800-77660600	Weak transcription	Primary T cells fromperipheralblood	blood
9	chr1:77634400-77656600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
10	chr1:77638200-77662200	Weak transcription	Small Intestine	intestine
11	chr1:77643400-77669600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr1:77643600-77663000	Weak transcription	Brain Inferior Temporal Lobe	brain
13	chr1:77643600-77672600	Weak transcription	Fetal Lung	lung
14	chr1:77643800-77674400	Weak transcription	Psoas Muscle	Psoas
15	chr1:77645600-77661600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr1:77646200-77660200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr1:77648000-77660800	Weak transcription	Spleen	Spleen
18	chr1:77648400-77684000	Weak transcription	Duodenum Smooth Muscle	Duodenum
19	chr1:77648800-77661400	Weak transcription	Fetal Muscle Trunk	muscle
20	chr1:77649000-77679800	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr1:77649200-77672400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr1:77649600-77666600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
23	chr1:77649800-77661200	Weak transcription	Pancreas	Pancrea
24	chr1:77650200-77660600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr1:77650800-77657800	Weak transcription	Primary T helper cells fromperipheralblood	blood
26	chr1:77650800-77668800	Weak transcription	Adipose Nuclei	Adipose
27	chr1:77650800-77672000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr1:77650800-77684200	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr1:77651000-77660400	Weak transcription	Primary hematopoietic stem cells	blood
30	chr1:77651000-77662600	Weak transcription	Skeletal Muscle Male	skeletal muscle
31	chr1:77651200-77660000	Weak transcription	Primary B cells from peripheral blood	blood
32	chr1:77651200-77663200	Weak transcription	Duodenum Mucosa	Duodenum
33	chr1:77651200-77668000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr1:77651800-77660600	Weak transcription	Lung	lung
35	chr1:77651800-77664800	Weak transcription	Gastric	stomach
36	chr1:77651800-77665800	Weak transcription	Brain Cingulate Gyrus	brain
37	chr1:77652000-77662000	Weak transcription	Fetal Brain Male	brain
38	chr1:77652000-77662400	Weak transcription	Right Ventricle	heart
39	chr1:77652600-77683400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr1:77653000-77657400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
41	chr1:77653000-77658800	Weak transcription	Aorta	Aorta
42	chr1:77653000-77661800	Weak transcription	Stomach Smooth Muscle	stomach
43	chr1:77653200-77670800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
44	chr1:77653400-77659200	Weak transcription	Primary B cells from cord blood	blood
45	chr1:77653400-77667800	Weak transcription	NHDF-Ad	bronchial
46	chr1:77653600-77656400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
47	chr1:77654000-77669600	Weak transcription	Monocytes-CD14+_RO01746	blood
48	chr1:77654600-77655800	ZNF genes & repeats	Dnd41	blood
49	chr1:77654600-77656600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr1:77654800-77660600	Weak transcription	NHEK	skin

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