Variant report

Variant nsv525445
Chromosome Location chr1:209885318-209912593
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:234 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209878600-209888200 Weak transcription Brain Angular Gyrus brain
2 chr1:209878800-209893400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr1:209881200-209886000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:209881400-209887200 Weak transcription HMEC breast
5 chr1:209882200-209887000 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:209882400-209887000 Weak transcription Brain Hippocampus Middle brain
7 chr1:209882400-209887000 Weak transcription Brain Substantia Nigra brain
8 chr1:209882600-209886800 Weak transcription Brain Cingulate Gyrus brain
9 chr1:209883000-209887400 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:209883200-209886000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:209884000-209886000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:209884000-209889000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:209884400-209887400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:209884600-209886000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:209885000-209886200 Weak transcription NHEK skin
16 chr1:209885000-209886600 Weak transcription Liver Liver
17 chr1:209885000-209887200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:209885000-209888200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:209885200-209886400 Enhancers HUVEC blood vessel
20 chr1:209886000-209886200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:209886000-209886400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:209886000-209886400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:209886000-209886400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:209886000-209887400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:209886200-209886600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:209886200-209886600 Enhancers NHEK skin
27 chr1:209886400-209887400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:209886400-209893200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:209886400-209896400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:209886600-209888000 Weak transcription NHEK skin
31 chr1:209886600-209889000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:209886600-209889000 Strong transcription Liver Liver
33 chr1:209886800-209888400 Enhancers Brain Cingulate Gyrus brain
34 chr1:209887000-209889000 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr1:209887000-209889000 Enhancers Brain Hippocampus Middle brain
36 chr1:209887000-209889000 Enhancers Brain Substantia Nigra brain
37 chr1:209887200-209887400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr1:209887200-209887600 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr1:209887200-209888200 Enhancers HMEC breast
40 chr1:209887400-209887600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:209887400-209888200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr1:209887400-209889000 Enhancers Brain Inferior Temporal Lobe brain
43 chr1:209887400-209889200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr1:209887600-209887800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:209887600-209888400 Enhancers Brain Anterior Caudate brain
46 chr1:209887600-209889200 Enhancers Placenta Amnion Placenta Amnion
47 chr1:209888000-209888200 Enhancers Lung lung
48 chr1:209888000-209888200 Enhancers NHEK skin
49 chr1:209888000-209888400 Enhancers Placenta Placenta
50 chr1:209888200-209888400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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