Variant report

Variant	nsv5255
Chromosome Location	chr6:34658569-34703563
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:818)
CpG islands
(count:977)
Chromatin interactive
region (count:67)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:818 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:34682463-34682759	K562	blood:	n/a	n/a
2	ARID3A	chr6:34662211-34662447	K562	blood:	n/a	n/a
3	ARID3A	chr6:34699510-34699850	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:34665665-34666071	K562	blood:	n/a	n/a
5	ARID3A	chr6:34664800-34665428	K562	blood:	n/a	n/a
6	ARID3A	chr6:34664598-34665247	HepG2	liver:	n/a	n/a
7	ATF1	chr6:34665710-34666066	K562	blood:	n/a	n/a
8	ATF1	chr6:34664551-34665370	K562	blood:	n/a	chr6:34664738-34664752
9	ATF1	chr6:34682476-34682782	K562	blood:	n/a	n/a
10	ATF2	chr6:34664580-34664940	H1-hESC	embryonic stem cell:	n/a	chr6:34664738-34664752
11	ATF2	chr6:34664580-34664909	H1-hESC	embryonic stem cell:	n/a	chr6:34664738-34664752
12	ATF2	chr6:34664633-34665178	GM12878	blood:	n/a	chr6:34664738-34664752
13	ATF2	chr6:34664567-34665160	GM12878	blood:	n/a	chr6:34664738-34664752
14	ATF3	chr6:34665657-34666102	K562	blood:	n/a	n/a
15	ATF3	chr6:34682457-34682837	K562	blood:	n/a	n/a
16	BACH1	chr6:34665701-34665768	K562	blood:	n/a	n/a
17	BACH1	chr6:34691059-34691391	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr6:34691020-34691511	K562	blood:	n/a	n/a
19	BACH1	chr6:34664749-34664975	H1-hESC	embryonic stem cell:	n/a	n/a
20	BATF	chr6:34665787-34665995	GM12878	blood:	n/a	chr6:34665889-34665900
21	BATF	chr6:34691509-34691713	GM12878	blood:	n/a	n/a
22	BCL3	chr6:34664626-34665041	A549	lung:	n/a	chr6:34664876-34664889 chr6:34664808-34664817
23	BCLAF1	chr6:34664612-34665078	GM12878	blood:	n/a	chr6:34664876-34664889 chr6:34664808-34664817
24	BHLHE40	chr6:34664577-34665108	GM12878	blood:	n/a	n/a
25	BHLHE40	chr6:34682512-34682755	K562	blood:	n/a	n/a
26	BHLHE40	chr6:34664569-34664909	HepG2	liver:	n/a	n/a
27	BHLHE40	chr6:34677264-34677400	K562	blood:	n/a	n/a
28	BHLHE40	chr6:34664331-34664366	GM12878	blood:	n/a	n/a
29	BHLHE40	chr6:34664221-34665410	K562	blood:	n/a	n/a
30	BRCA1	chr6:34664433-34664441	HepG2	liver:	n/a	n/a
31	BRCA1	chr6:34664585-34665261	Hela-S3	cervix:	n/a	n/a
32	BRCA1	chr6:34664299-34664380	Hela-S3	cervix:	n/a	n/a
33	BRCA1	chr6:34664697-34664897	HepG2	liver:	n/a	n/a
34	BRCA1	chr6:34664638-34664888	H1-hESC	embryonic stem cell:	n/a	n/a
35	CBX3	chr6:34693761-34694109	K562	blood:	n/a	n/a
36	CBX3	chr6:34693680-34694281	K562	blood:	n/a	n/a
37	CBX3	chr6:34682269-34682849	K562	blood:	n/a	n/a
38	CBX3	chr6:34665415-34666102	K562	blood:	n/a	n/a
39	CBX3	chr6:34664354-34665410	K562	blood:	n/a	n/a
40	CCNT2	chr6:34664058-34665253	K562	blood:	n/a	chr6:34664807-34664816
41	CCNT2	chr6:34682475-34682743	K562	blood:	n/a	n/a
42	CEBPB	chr6:34685629-34685878	HepG2	liver:	n/a	chr6:34685828-34685839
43	CEBPB	chr6:34685762-34685926	K562	blood:	n/a	chr6:34685828-34685839
44	CEBPB	chr6:34664601-34665305	A549	lung:	n/a	chr6:34665129-34665140
45	CEBPB	chr6:34662595-34663414	K562	blood:	n/a	chr6:34663009-34663020
46	CEBPB	chr6:34685350-34686027	A549	lung:	n/a	chr6:34685828-34685839
47	CEBPB	chr6:34664600-34665289	IMR90	lung:	n/a	chr6:34665129-34665140
48	CEBPB	chr6:34685217-34686045	Hela-S3	cervix:	n/a	chr6:34685828-34685839
49	CEBPB	chr6:34664588-34665293	MCF-7	breast:	n/a	chr6:34665129-34665140
50	CEBPB	chr6:34685663-34686029	HepG2	liver:	n/a	chr6:34685828-34685839

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:34666684-34666734	SK-N-SH_RA	brain:	n/a
2	chr6:34666684-34666734	SK-N-SH_RA	brain:	n/a
3	chr6:34691678-34691728	Hela-S3	cervix:	n/a
4	chr6:34664812-34664862	BE2_C	brain:	n/a
5	chr6:34665034-34665084	HepG2	liver:	n/a
6	chr6:34666684-34666734	HEEpiC	esophagus:	n/a
7	chr6:34664215-34664265	HL-60	blood:	n/a
8	chr6:34664699-34664749	GM19239	blood:	n/a
9	chr6:34666684-34666734	HUVEC	blood vessel:	n/a
10	chr6:34664215-34664265	AoSMC	blood vessel:	n/a
11	chr6:34665156-34665206	SK-N-MC	brain:	n/a
12	chr6:34664305-34664355	MCF10A-Er-Src	breast:	n/a
13	chr6:34664887-34664937	ECC-1	luminal epithelium:	n/a
14	chr6:34664215-34664265	GM12891	blood:	n/a
15	chr6:34691678-34691728	GM12891	blood:	n/a
16	chr6:34663277-34663327	HNPCEpiC	eye:	n/a
17	chr6:34665156-34665206	K562	blood:	n/a
18	chr6:34665156-34665206	HPAEpiC	pulmonary alveolar:	n/a
19	chr6:34664812-34664862	HCPEpiC	choroid plexus:	n/a
20	chr6:34662875-34662925	NHBE	bronchial:	n/a
21	chr6:34662875-34662925	GM12892	blood:	n/a
22	chr6:34677450-34677500	HL-60	blood:	n/a
23	chr6:34691678-34691728	SAEC	small airway:	n/a
24	chr6:34663155-34663205	NHBE	bronchial:	n/a
25	chr6:34664215-34664265	HCM	heart:	n/a
26	chr6:34666684-34666734	GM12878	blood:	n/a
27	chr6:34660294-34660344	GM12892	blood:	n/a
28	chr6:34664215-34664265	IMR90	lung:	fetal
29	chr6:34664305-34664355	HIPEpiC	eye:	n/a
30	chr6:34665156-34665206	NB4	blood:	n/a
31	chr6:34663277-34663327	NB4	blood:	n/a
32	chr6:34664488-34664538	HUVEC	blood vessel:	n/a
33	chr6:34664812-34664862	HCM	heart:	n/a
34	chr6:34677450-34677500	K562	blood:	n/a
35	chr6:34663277-34663327	HMEC	breast:	n/a
36	chr6:34664812-34664862	NT2-D1	testis:	n/a
37	chr6:34677450-34677500	SK-N-SH	brain:	n/a
38	chr6:34664887-34664937	SK-N-SH	brain:	n/a
39	chr6:34664887-34664937	BE2_C	brain:	n/a
40	chr6:34664703-34664753	NHDF-neo	bronchial:	n/a
41	chr6:34664215-34664265	BJ	skin:	n/a
42	chr6:34665034-34665084	A549	lung:	n/a
43	chr6:34660294-34660344	AG09309	skin:	n/a
44	chr6:34666684-34666734	HL-60	blood:	n/a
45	chr6:34691678-34691728	PFSK-1	brain:	n/a
46	chr6:34664215-34664265	HCPEpiC	choroid plexus:	n/a
47	chr6:34664305-34664355	AG09309	skin:	n/a
48	chr6:34677450-34677500	HUVEC	blood vessel:	n/a
49	chr6:34664887-34664937	PFSK-1	brain:	n/a
50	chr6:34664215-34664265	Hela-S3	cervix:	n/a

(count:67 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:34663461..34666396-chr6:34758437..34761219,3	K562	blood:
2	chr6:34663907..34669185-chr6:34723600..34728462,6	MCF-7	breast:
3	chr6:34433144..34435297-chr6:34663197..34665594,2	MCF-7	breast:
4	chr6:34656941..34658907-chr6:34661433..34663636,2	MCF-7	breast:
5	chr6:34662945..34666396-chr6:34758284..34762755,7	K562	blood:
6	chr6:34657528..34660560-chr6:34662754..34664755,3	MCF-7	breast:
7	chr6:34657888..34660088-chr6:34685697..34688432,2	MCF-7	breast:
8	chr6:34664734..34666755-chr6:34668036..34669637,2	K562	blood:
9	chr6:34660360..34662631-chr6:34662736..34665398,3	K562	blood:
10	chr11:65624341..65625267-chr6:34664302..34664857,2	Hela-S3	cervix:
11	chr6:34671316..34674801-chr6:34727062..34730590,3	K562	blood:
12	chr6:34681902..34684168-chr6:34685297..34688228,3	K562	blood:
13	chr6:34683902..34686435-chr6:34695998..34698813,2	K562	blood:
14	chr6:34662430..34663990-chr6:34776772..34779550,2	MCF-7	breast:
15	chr6:34660657..34663419-chr6:34759568..34761216,2	MCF-7	breast:
16	chr6:34663482..34665135-chr6:34670765..34672477,2	MCF-7	breast:
17	chr6:34659775..34661894-chr6:34663558..34666240,3	K562	blood:
18	chr6:34392408..34394621-chr6:34663502..34666102,2	K562	blood:
19	chr6:34673308..34675540-chr6:34685613..34688342,2	MCF-7	breast:
20	chr6:34664734..34666755-chr6:34668036..34669637,2	K562	blood:
21	chr6:34698371..34700265-chr6:34702057..34704593,2	K562	blood:
22	chr6:34656941..34658907-chr6:34661433..34663636,2	MCF-7	breast:
23	chr6:34685141..34687022-chr6:34692903..34695560,2	K562	blood:
24	chr6:34685141..34688900-chr6:34692903..34695756,4	K562	blood:
25	chr6:34689130..34691156-chr6:34693829..34696616,2	K562	blood:
26	chr6:34664626..34667053-chr6:34675137..34677958,3	K562	blood:
27	chr6:34665467..34667075-chr6:34685677..34688380,2	K562	blood:
28	chr6:34690459..34693304-chr6:34723664..34726438,2	K562	blood:
29	chr6:34657528..34660560-chr6:34662754..34664755,3	MCF-7	breast:
30	chr6:34658536..34661755-chr6:34723904..34726636,3	MCF-7	breast:
31	chr6:34659775..34661894-chr6:34663558..34666240,3	K562	blood:
32	chr6:34649586..34652220-chr6:34663564..34665833,2	MCF-7	breast:
33	chr6:34674851..34676937-chr6:34678092..34680234,2	K562	blood:
34	chr6:34663382..34666828-chr6:34670260..34673795,4	K562	blood:
35	chr6:34393223..34395757-chr6:34661033..34663360,2	K562	blood:
36	chr6:34698371..34700265-chr6:34702057..34704593,2	K562	blood:
37	chr6:34657888..34660088-chr6:34685697..34688432,2	MCF-7	breast:
38	chr6:34653279..34655876-chr6:34663256..34664778,2	MCF-7	breast:
39	chr6:34685141..34687022-chr6:34692903..34695560,2	K562	blood:
40	chr6:34681066..34682821-chr6:34689773..34692489,2	K562	blood:
41	chr6:34665467..34667075-chr6:34685677..34688380,2	K562	blood:
42	chr6:34689130..34691156-chr6:34693829..34696616,2	K562	blood:
43	chr6:34663129..34665276-chr6:34679494..34681887,3	K562	blood:
44	chr6:34660360..34662631-chr6:34662736..34665398,3	K562	blood:
45	chr6:34665132..34667717-chr6:34706629..34708944,2	MCF-7	breast:
46	chr6:34672410..34673961-chr6:34856046..34857679,2	K562	blood:
47	chr6:34681066..34682821-chr6:34689773..34692489,2	K562	blood:
48	chr6:34685141..34688900-chr6:34692903..34695756,4	K562	blood:
49	chr6:34671509..34674335-chr6:34684957..34686904,2	K562	blood:
50	chr6:34584121..34585997-chr6:34662703..34665284,2	K562	blood:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SNRPC-2	chr6:34664936-34665247	ENSG00000272288.1
2	lnc-SNRPC-2	chr6:34664722-34664774	ENSG00000272288.1
3	lnc-SNRPC-2	chr6:34664936-34665339	NONHSAT112145
4	lnc-SNRPC-2	chr6:34664094-34664499	ENSG00000272288.1
5	lnc-SNRPC-2	chr6:34664936-34665247	ENSG00000272288.1
6	lnc-SNRPC-1	chr6:34683390-34683717	NONHSAT112146
7	lnc-SNRPC-2	chr6:34664723-34664774	NONHSAT112145

No data

Variant related genes	Relation type
C6orf106	TF binding region
ENSG00000272288	TF binding region
ENSG00000238484	TF binding region
ENSG00000186328	TF binding region
C6orf106	CpG island
ENSG00000272288	CpG island
ENSG00000238484	CpG island
ENSG00000186328	CpG island
ENSG00000216636	chromatin interactions
ENSG00000272288	chromatin interactions
ENSG00000238484	chromatin interactions
ENSG00000172732	chromatin interactions
ENSG00000172757	chromatin interactions
ENSG00000196821	chromatin interactions
ENSG00000239059	chromatin interactions
ENSG00000124614	chromatin interactions
ENSG00000186328	chromatin interactions
ENSG00000064999	chromatin interactions
ENSG00000270800	chromatin interactions
ENSG00000124507	chromatin interactions
ENSG00000124562	chromatin interactions
ENSG00000220643	chromatin interactions
ENSG00000065060	chromatin interactions
ENSG00000265123	chromatin interactions

Extended variants
information (count: 1603 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:1603 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs41438444	chr6:34658628-34658629	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs139606906	chr6:34658629-34658630	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs538988266	chr6:34658633-34658634	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs536897570	chr6:34658713-34658714	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs538421410	chr6:34658746-34658747	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs554217719	chr6:34658747-34658748	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs191135176	chr6:34658762-34658763	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs201071930	chr6:34658766-34658767	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs543350912	chr6:34658825-34658826	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs557286071	chr6:34658828-34658829	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs554845051	chr6:34658857-34658858	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs368698488	chr6:34658898-34658899	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs576611771	chr6:34658900-34658901	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs556439036	chr6:34658908-34658909	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs543625561	chr6:34658911-34658912	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs144212411	chr6:34658917-34658918	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs532083560	chr6:34658922-34658923	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs540587144	chr6:34658929-34658930	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs559343476	chr6:34658943-34658944	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs529945107	chr6:34658985-34658986	Weak transcription Enhancers Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs2744972	chr6:34659054-34659055	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
22	rs569865941	chr6:34659089-34659090	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs530701440	chr6:34659152-34659153	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs9462002	chr6:34659234-34659235	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs571728771	chr6:34659250-34659251	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs116770550	chr6:34659262-34659263	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs183276569	chr6:34659298-34659299	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs566091121	chr6:34659313-34659314	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs146539293	chr6:34659334-34659335	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs555211480	chr6:34659335-34659336	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs56212723	chr6:34659337-34659338	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs58856784	chr6:34659338-34659339	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs59351715	chr6:34659354-34659355	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs59238133	chr6:34659377-34659378	Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs59481480	chr6:34659385-34659386	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs60120611	chr6:34659394-34659395	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs61455977	chr6:34659395-34659396	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs141100925	chr6:34659402-34659403	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs60045606	chr6:34659404-34659405	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs542286062	chr6:34659446-34659447	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs543562971	chr6:34659478-34659479	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs6911083	chr6:34659490-34659491	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs375073059	chr6:34659491-34659492	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs576523095	chr6:34659498-34659499	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs542344645	chr6:34659542-34659543	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs540776796	chr6:34659543-34659544	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs559066507	chr6:34659562-34659563	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs34756076	chr6:34659572-34659573	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs9380450	chr6:34659608-34659609	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs369810572	chr6:34659624-34659625	Weak transcription Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:979 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:34626000-34662000	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr6:34626800-34662400	Weak transcription	Fetal Muscle Trunk	muscle
3	chr6:34633000-34662800	Weak transcription	Aorta	Aorta
4	chr6:34634800-34663200	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr6:34636400-34662200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr6:34639800-34662800	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr6:34639800-34662800	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr6:34641400-34662800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr6:34641800-34661200	Weak transcription	Brain Hippocampus Middle	brain
10	chr6:34641800-34663200	Weak transcription	Gastric	stomach
11	chr6:34642200-34663000	Weak transcription	Thymus	Thymus
12	chr6:34643000-34661200	Weak transcription	Right Atrium	heart
13	chr6:34643000-34662800	Weak transcription	Stomach Mucosa	stomach
14	chr6:34647800-34660800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
15	chr6:34647800-34661000	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr6:34647800-34662000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr6:34647800-34662200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr6:34647800-34662400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr6:34647800-34662600	Weak transcription	Ovary	ovary
20	chr6:34647800-34662800	Weak transcription	Brain Substantia Nigra	brain
21	chr6:34647800-34662800	Weak transcription	HSMMtube	muscle
22	chr6:34648000-34662600	Weak transcription	Right Ventricle	heart
23	chr6:34648000-34662800	Weak transcription	HUES64 Cell Line	embryonic stem cell
24	chr6:34648400-34662000	Weak transcription	Brain Anterior Caudate	brain
25	chr6:34649200-34660200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
26	chr6:34649200-34660400	Weak transcription	Primary T cells from cord blood	blood
27	chr6:34649200-34662200	Weak transcription	Rectal Mucosa Donor 31	rectum
28	chr6:34649200-34662600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr6:34649400-34660200	Weak transcription	NHEK	skin
30	chr6:34649400-34661600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr6:34649400-34661600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr6:34649400-34662000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr6:34649400-34662000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
34	chr6:34649400-34662000	Weak transcription	Osteobl	bone
35	chr6:34649400-34662400	Weak transcription	HSMM	muscle
36	chr6:34649600-34661000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr6:34649600-34661000	Weak transcription	Muscle Satellite Cultured Cells	--
38	chr6:34649600-34661000	Weak transcription	Duodenum Mucosa	Duodenum
39	chr6:34649600-34662000	Weak transcription	Primary hematopoietic stem cells	blood
40	chr6:34649800-34660400	Weak transcription	Fetal Intestine Small	intestine
41	chr6:34650600-34659200	Weak transcription	Primary T cells fromperipheralblood	blood
42	chr6:34650800-34659000	Weak transcription	Primary B cells from peripheral blood	blood
43	chr6:34652800-34660000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
44	chr6:34652800-34660000	Weak transcription	Pancreatic Islets	Pancreatic Islet
45	chr6:34652800-34661200	Weak transcription	Hela-S3	cervix
46	chr6:34652800-34662200	Weak transcription	A549	lung
47	chr6:34653000-34662000	Weak transcription	Sigmoid Colon	Sigmoid Colon
48	chr6:34654000-34660800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
49	chr6:34655400-34660000	Weak transcription	Dnd41	blood
50	chr6:34655400-34663000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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