Variant report

Variant	nsv525589
Chromosome Location	chr4:10080462-10099814
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr4:10097806-10098386	K562	blood:	n/a	n/a
2	ATF2	chr4:10097507-10098531	GM12878	blood:	n/a	n/a
3	ATF2	chr4:10097610-10098628	GM12878	blood:	n/a	n/a
4	BACH1	chr4:10097797-10098067	K562	blood:	n/a	n/a
5	BCLAF1	chr4:10097634-10098303	GM12878	blood:	n/a	n/a
6	BHLHE40	chr4:10098006-10098224	GM12878	blood:	n/a	n/a
7	BHLHE40	chr4:10097838-10098171	K562	blood:	n/a	n/a
8	BRCA1	chr4:10085296-10085313	HepG2	liver:	n/a	n/a
9	CBX3	chr4:10097750-10098072	K562	blood:	n/a	n/a
10	CCNT2	chr4:10098530-10098848	K562	blood:	n/a	n/a
11	CEBPB	chr4:10091277-10091625	A549	lung:	n/a	n/a
12	CEBPB	chr4:10095325-10095705	IMR90	lung:	n/a	n/a
13	CEBPB	chr4:10097742-10098540	GM12878	blood:	n/a	n/a
14	CEBPB	chr4:10091312-10091618	HepG2	liver:	n/a	n/a
15	CEBPB	chr4:10097786-10098503	IMR90	lung:	n/a	n/a
16	CEBPB	chr4:10091307-10091571	K562	blood:	n/a	n/a
17	CEBPB	chr4:10091336-10091621	IMR90	lung:	n/a	n/a
18	CHD2	chr4:10097897-10098131	GM12878	blood:	n/a	n/a
19	CHD2	chr4:10087049-10087225	HepG2	liver:	n/a	n/a
20	CHD2	chr4:10085675-10085747	HepG2	liver:	n/a	n/a
21	CHD2	chr4:10081025-10081286	HepG2	liver:	n/a	n/a
22	CREB1	chr4:10097798-10098622	GM12878	blood:	n/a	n/a
23	CTCF	chr4:10091060-10091210	AG04450	lung:	n/a	n/a
24	CTCF	chr4:10091140-10091363	LNCaP	prostate:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
25	CTCF	chr4:10091160-10091310	Caco-2	colon:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
26	CTCF	chr4:10091144-10091304	K562	blood:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
27	CTCF	chr4:10091180-10091330	HUVEC	blood vessel:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
28	CTCF	chr4:10091140-10091290	WERI-Rb-1	eye:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
29	CTCF	chr4:10091170-10091356	GM12891	blood:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
30	CTCF	chr4:10091112-10091395	HUVEC	blood vessel:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
31	CTCF	chr4:10091220-10091370	AG09309	skin:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
32	CTCF	chr4:10091200-10091350	WERI-Rb-1	eye:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
33	CTCF	chr4:10091062-10091389	H1-hESC	embryonic stem cell:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
34	CTCF	chr4:10091202-10091308	Gliobla	brain:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
35	CTCF	chr4:10091160-10091310	HPAF	blood vessel:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
36	CTCF	chr4:10091220-10091370	NHEK	skin:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
37	CTCF	chr4:10091160-10091310	HCPEpiC	choroid plexus:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
38	CTCF	chr4:10091160-10091310	SK-N-SH_RA	brain:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
39	CTCF	chr4:10091220-10091370	BE2_C	brain:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
40	CTCF	chr4:10091072-10091381	H1-hESC	embryonic stem cell:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
41	CTCF	chr4:10091159-10091364	GM12878	blood:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
42	CTCF	chr4:10091180-10091330	NHDF-neo	bronchial:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
43	CTCF	chr4:10091205-10091322	GM19240	blood:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
44	CTCF	chr4:10091140-10091290	GM12875	blood:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
45	CTCF	chr4:10097880-10098030	BJ	skin:	n/a	n/a
46	CTCF	chr4:10091207-10091340	GM10248	blood:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
47	CTCF	chr4:10091207-10091292	Spleen_OC	spleen:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
48	CTCF	chr4:10091136-10091375	Medullo	brain:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
49	CTCF	chr4:10091160-10091310	GM12866	blood:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260
50	CTCF	chr4:10091200-10091350	HVMF	connective:	n/a	chr4:10091248-10091264 chr4:10091249-10091257 chr4:10091250-10091263 chr4:10091247-10091265 chr4:10091247-10091260

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:10082415-10082465	LNCaP	prostate:	n/a
2	chr4:10082415-10082465	LNCaP	prostate:	n/a
3	chr4:10086450-10086500	HCPEpiC	choroid plexus:	n/a
4	chr4:10086483-10086533	MCF10A-Er-Src	breast:	n/a
5	chr4:10084747-10084797	MCF-7	breast:	n/a
6	chr4:10084725-10084775	PFSK-1	brain:	n/a
7	chr4:10086483-10086533	GM06990	blood:	n/a
8	chr4:10086450-10086500	AG10803	skin:	n/a
9	chr4:10089839-10089889	BE2_C	brain:	n/a
10	chr4:10086450-10086500	AG09309	skin:	n/a
11	chr4:10084680-10084730	GM12891	blood:	n/a
12	chr4:10084680-10084730	HCM	heart:	n/a
13	chr4:10084680-10084730	AoSMC	blood vessel:	n/a
14	chr4:10095183-10095233	ECC-1	luminal epithelium:	n/a
15	chr4:10089904-10089954	HCF	heart:	n/a
16	chr4:10084680-10084730	AG09309	skin:	n/a
17	chr4:10084725-10084775	HCPEpiC	choroid plexus:	n/a
18	chr4:10089904-10089954	HUVEC	blood vessel:	n/a
19	chr4:10084725-10084775	Caco-2	colon:	n/a
20	chr4:10089839-10089889	CMK	blood:	n/a
21	chr4:10095183-10095233	GM06990	blood:	n/a
22	chr4:10086483-10086533	HEEpiC	esophagus:	n/a
23	chr4:10089904-10089954	NT2-D1	testis:	n/a
24	chr4:10089839-10089889	SK-N-MC	brain:	n/a
25	chr4:10084747-10084797	HAEpiC	amniotic membrane:	n/a
26	chr4:10082415-10082465	MCF-7	breast:	n/a
27	chr4:10084725-10084775	AG09319	gingival:	n/a
28	chr4:10095183-10095233	AG04450	lung:	fetal
29	chr4:10095183-10095233	HepG2	liver:	n/a
30	chr4:10084747-10084797	AG04449	skin:	fetal
31	chr4:10084725-10084775	Hela-S3	cervix:	n/a
32	chr4:10084747-10084797	MCF10A-Er-Src	breast:	n/a
33	chr4:10089904-10089954	Hela-S3	cervix:	n/a
34	chr4:10089919-10089969	HEK293	kidney:	embryo
35	chr4:10082415-10082465	NB4	blood:	n/a
36	chr4:10084680-10084730	AG09319	gingival:	n/a
37	chr4:10089919-10089969	NB4	blood:	n/a
38	chr4:10089839-10089889	HRPEpiC	eye:	n/a
39	chr4:10095183-10095233	SK-N-MC	brain:	n/a
40	chr4:10084680-10084730	MCF10A-Er-Src	breast:	n/a
41	chr4:10089839-10089889	HCM	heart:	n/a
42	chr4:10089839-10089889	GM06990	blood:	n/a
43	chr4:10086450-10086500	CMK	blood:	n/a
44	chr4:10089839-10089889	NHBE	bronchial:	n/a
45	chr4:10089904-10089954	GM12892	blood:	n/a
46	chr4:10089919-10089969	AG09319	gingival:	n/a
47	chr4:10082415-10082465	HEK293	kidney:	embryo
48	chr4:10084680-10084730	HCT-116	colon:	n/a
49	chr4:10089839-10089889	HIPEpiC	eye:	n/a
50	chr4:10084680-10084730	AG04449	skin:	fetal

No.	Distal block	Cell Line	Cell type
1	chr4:10092915..10094624-chr4:10096149..10098338,2	MCF-7	breast:
2	chr4:10089838..10092130-chr4:10112314..10114162,2	MCF-7	breast:
3	chr4:10073732..10076710-chr4:10079365..10080876,2	K562	blood:
4	chr4:10095456..10100275-chr4:10105163..10110395,7	MCF-7	breast:
5	chr4:10081223..10082723-chr4:10086537..10088286,2	MCF-7	breast:
6	chr4:10097932..10101732-chr4:10116626..10120469,5	MCF-7	breast:
7	chr4:10081223..10082723-chr4:10086537..10088286,2	MCF-7	breast:
8	chr4:10080904..10082503-chr4:10086648..10088570,2	K562	blood:
9	chr4:10081093..10083162-chr4:10083280..10086160,2	MCF-7	breast:
10	chr4:10081093..10083162-chr4:10083280..10086160,2	MCF-7	breast:
11	chr4:10088339..10092907-chr4:10114333..10120002,8	MCF-7	breast:
12	chr4:10083243..10085127-chr4:10085254..10087510,2	K562	blood:
13	chr4:10089641..10094747-chr4:10094922..10099608,4	MCF-7	breast:
14	chr4:10080344..10083261-chr4:10099505..10101850,2	MCF-7	breast:
15	chr4:10091716..10096918-chr4:10117039..10120240,5	MCF-7	breast:
16	chr4:10085861..10088252-chr4:10117616..10120085,2	MCF-7	breast:
17	chr4:10088625..10091657-chr4:10117426..10119862,3	MCF-7	breast:
18	chr4:10094579..10097244-chr4:10117506..10119251,2	MCF-7	breast:
19	chr4:10088244..10091996-chr4:10094895..10098032,3	MCF-7	breast:
20	chr4:10083243..10085127-chr4:10085254..10087510,2	K562	blood:
21	chr4:10080344..10083261-chr4:10099505..10101850,2	MCF-7	breast:
22	chr4:10083462..10086704-chr4:10090004..10092862,3	MCF-7	breast:
23	chr4:10092915..10094624-chr4:10096149..10098338,2	MCF-7	breast:
24	chr4:10079005..10081896-chr4:10084564..10086556,3	K562	blood:
25	chr4:10098588..10100912-chr4:10117777..10119598,3	MCF-7	breast:
26	chr4:10079908..10083086-chr4:10118111..10120743,3	MCF-7	breast:
27	chr4:10080509..10086191-chr4:10116536..10120345,7	MCF-7	breast:
28	chr4:10080904..10082503-chr4:10086648..10088570,2	K562	blood:
29	chr3:78594989..78595560-chr4:10084887..10085729,2	MCF-7	breast:
30	chr4:10089641..10094747-chr4:10094922..10099608,4	MCF-7	breast:
31	chr4:10083462..10086704-chr4:10090004..10092862,3	MCF-7	breast:
32	chr4:10099001..10100865-chr4:10100880..10102425,2	MCF-7	breast:

Variant related genes	Relation type
MIR3138	TF binding region
WDR1	TF binding region
MIR3138	CpG island
WDR1	CpG island
ENSG00000223086	chromatin interactions
ENSG00000264931	chromatin interactions
ENSG00000071127	chromatin interactions
ENSG00000261490	chromatin interactions

Extended variants
information (count: 1176 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:1176 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2241469	chr4:10080462-10080463	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs372026591	chr4:10080481-10080482	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs527269415	chr4:10080492-10080493	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs375339841	chr4:10080495-10080496	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs548884380	chr4:10080501-10080502	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs567411300	chr4:10080502-10080503	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs374122996	chr4:10080507-10080508	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs538056853	chr4:10080508-10080509	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs368255182	chr4:10080526-10080527	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs556039635	chr4:10080529-10080530	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs200861812	chr4:10080534-10080535	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs571419010	chr4:10080541-10080542	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs201687763	chr4:10080544-10080545	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs369817887	chr4:10080545-10080546	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs372339584	chr4:10080571-10080572	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs141888900	chr4:10080572-10080573	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs540604733	chr4:10080577-10080578	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs556104463	chr4:10080578-10080579	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs574205889	chr4:10080586-10080587	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs369081126	chr4:10080587-10080588	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs373350731	chr4:10080658-10080659	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs560298008	chr4:10080664-10080665	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs562980730	chr4:10080677-10080678	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs533552912	chr4:10080678-10080679	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs535016751	chr4:10080680-10080681	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs377545543	chr4:10080690-10080691	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs146172769	chr4:10080777-10080778	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs139118727	chr4:10080782-10080783	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs78140483	chr4:10080807-10080808	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs555891145	chr4:10080888-10080889	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs548532013	chr4:10080922-10080923	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs567557166	chr4:10080937-10080938	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs142539447	chr4:10080938-10080939	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs550042018	chr4:10080958-10080959	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs571387923	chr4:10080974-10080975	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs11723559	chr4:10080991-10080992	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs551927369	chr4:10081005-10081006	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs566937988	chr4:10081027-10081028	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs183475917	chr4:10081049-10081050	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs56146302	chr4:10081052-10081053	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
41	rs115315194	chr4:10081077-10081078	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs375542823	chr4:10081086-10081087	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs188898275	chr4:10081092-10081093	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs150960632	chr4:10081093-10081094	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs78524185	chr4:10081097-10081098	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs545160730	chr4:10081103-10081104	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs55848383	chr4:10081117-10081118	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs139539281	chr4:10081124-10081125	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs7685806	chr4:10081201-10081202	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs560765493	chr4:10081219-10081220	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21509527	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Schizophrenia	22241247	CNVD
Autosomal-dominant microtia	18179897	CNVD
Glioma	17123091	CNVD
Colorectal cancer	20459617	CNVD
Breast cancer	17133270	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Neuroblastoma	20406844	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:685 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:10064600-10093800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr4:10065200-10094000	Strong transcription	NHLF	lung
3	chr4:10066000-10094600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr4:10067000-10093800	Strong transcription	Osteobl	bone
5	chr4:10067600-10102200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr4:10069200-10093200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr4:10070600-10081600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
8	chr4:10071600-10094200	Strong transcription	NHDF-Ad	bronchial
9	chr4:10072000-10092400	Strong transcription	Primary T cells from cord blood	blood
10	chr4:10072200-10092800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr4:10072400-10094000	Weak transcription	Fetal Brain Male	brain
12	chr4:10072400-10097000	Strong transcription	A549	lung
13	chr4:10072600-10094600	Strong transcription	Primary B cells from cord blood	blood
14	chr4:10072800-10082200	Strong transcription	Primary neutrophils fromperipheralblood	blood
15	chr4:10072800-10091200	Strong transcription	Primary T helper cells fromperipheralblood	blood
16	chr4:10073200-10080800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr4:10073600-10083800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr4:10073600-10089200	Strong transcription	HMEC	breast
19	chr4:10073600-10093800	Strong transcription	Fetal Stomach	stomach
20	chr4:10073600-10094600	Strong transcription	HUES6 Cell Line	embryonic stem cell
21	chr4:10073600-10094800	Strong transcription	HUES48 Cell Line	embryonic stem cell
22	chr4:10073800-10080600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
23	chr4:10073800-10085200	Strong transcription	Duodenum Mucosa	Duodenum
24	chr4:10073800-10085600	Strong transcription	HSMMtube	muscle
25	chr4:10073800-10093800	Strong transcription	ES-I3 Cell Line	embryonic stem cell
26	chr4:10073800-10094400	Strong transcription	H1 Cell Line	embryonic stem cell
27	chr4:10073800-10094400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr4:10073800-10094800	Strong transcription	Primary B cells from peripheral blood	blood
29	chr4:10073800-10103800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr4:10073800-10103800	Strong transcription	HUES64 Cell Line	embryonic stem cell
31	chr4:10074000-10081600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr4:10074000-10082200	Strong transcription	Fetal Thymus	thymus
33	chr4:10074000-10090400	Strong transcription	Primary T cells fromperipheralblood	blood
34	chr4:10074000-10090400	Strong transcription	Pancreas	Pancrea
35	chr4:10074000-10090400	Strong transcription	Rectal Mucosa Donor 31	rectum
36	chr4:10074000-10092200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
37	chr4:10074000-10092800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr4:10074000-10092800	Strong transcription	Thymus	Thymus
39	chr4:10074000-10093000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
40	chr4:10074000-10093400	Strong transcription	Primary hematopoietic stem cells	blood
41	chr4:10074000-10093600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr4:10074000-10093800	Strong transcription	Aorta	Aorta
43	chr4:10074000-10094600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
44	chr4:10074000-10094600	Strong transcription	GM12878-XiMat	blood
45	chr4:10074000-10094800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
46	chr4:10074000-10103800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr4:10074000-10105600	Strong transcription	H9 Cell Line	embryonic stem cell
48	chr4:10074200-10082400	Weak transcription	Hela-S3	cervix
49	chr4:10074200-10083600	Strong transcription	Brain Germinal Matrix	brain
50	chr4:10074200-10086400	Strong transcription	Duodenum Smooth Muscle	Duodenum

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