The 2.0 version of rSNPBase

Variant report

Variant nsv52569
Chromosome Location chr12:1117798-1117809
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:1101000-1123000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:1101200-1137000 Weak transcription Lung lung
3 chr12:1101600-1130400 Weak transcription Fetal Muscle Trunk muscle
4 chr12:1101600-1136800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr12:1101600-1136800 Weak transcription Fetal Muscle Leg muscle
6 chr12:1101600-1137000 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr12:1101800-1131000 Weak transcription Primary B cells from cord blood blood
8 chr12:1102000-1122800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr12:1102000-1137000 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr12:1102000-1137200 Weak transcription Fetal Lung lung
11 chr12:1102200-1118800 Weak transcription Fetal Brain Male brain
12 chr12:1102200-1122600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr12:1102200-1129000 Weak transcription Primary T cells from cord blood blood
14 chr12:1102200-1131000 Weak transcription Primary hematopoietic stem cells blood
15 chr12:1102200-1131400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr12:1102200-1135200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr12:1102600-1118800 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr12:1102600-1136800 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr12:1102600-1137000 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr12:1105000-1122600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr12:1105000-1122600 Weak transcription NHDF-Ad bronchial
22 chr12:1105200-1121200 Weak transcription A549 lung
23 chr12:1105200-1122600 Weak transcription HUVEC blood vessel
24 chr12:1105200-1122800 Weak transcription Muscle Satellite Cultured Cells --
25 chr12:1105200-1122800 Weak transcription NH-A brain
26 chr12:1105800-1122600 Weak transcription NHLF lung
27 chr12:1107000-1122400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr12:1107000-1128600 Weak transcription Spleen Spleen
29 chr12:1107600-1136600 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr12:1107800-1122600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr12:1107800-1128200 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr12:1108000-1128200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr12:1108000-1131000 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr12:1108200-1129000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr12:1110600-1128400 Weak transcription Fetal Stomach stomach
36 chr12:1110800-1121600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr12:1110800-1130400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr12:1111000-1122600 Weak transcription Hela-S3 cervix
39 chr12:1111000-1122600 Weak transcription Osteobl bone
40 chr12:1111000-1122800 Weak transcription HSMM muscle
41 chr12:1111000-1133200 Weak transcription Placenta Placenta
42 chr12:1111800-1129600 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr12:1112400-1130400 Weak transcription Primary monocytes fromperipheralblood blood
44 chr12:1113200-1120000 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr12:1113200-1122600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr12:1113200-1122800 Weak transcription Colon Smooth Muscle Colon
47 chr12:1113200-1130000 Weak transcription Fetal Intestine Small intestine
48 chr12:1113200-1131600 Weak transcription Thymus Thymus
49 chr12:1113200-1136600 Weak transcription Fetal Intestine Large intestine
50 chr12:1113200-1137200 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015