Variant report

Variant	nsv5260
Chromosome Location	chr6:36471464-36516119
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:742)
CpG islands
(count:549)
Chromatin interactive
region (count:98)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:742 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:36513454-36514129	K562	blood:	n/a	n/a
2	ARID3A	chr6:36491659-36492117	HepG2	liver:	n/a	n/a
3	BACH1	chr6:36514102-36514191	K562	blood:	n/a	n/a
4	BCL3	chr6:36507765-36508055	GM12878	blood:	n/a	n/a
5	BCL3	chr6:36507758-36508072	GM12878	blood:	n/a	n/a
6	BHLHE40	chr6:36515942-36516492	HepG2	liver:	n/a	n/a
7	BHLHE40	chr6:36484467-36484528	HepG2	liver:	n/a	n/a
8	BHLHE40	chr6:36512080-36512332	GM12878	blood:	n/a	n/a
9	BHLHE40	chr6:36514854-36515390	K562	blood:	n/a	n/a
10	BHLHE40	chr6:36514964-36515619	GM12878	blood:	n/a	n/a
11	BHLHE40	chr6:36515508-36515542	HepG2	liver:	n/a	n/a
12	BHLHE40	chr6:36474486-36474668	HepG2	liver:	n/a	n/a
13	BRCA1	chr6:36514980-36515261	GM12878	blood:	n/a	n/a
14	BRCA1	chr6:36515090-36515307	H1-hESC	embryonic stem cell:	n/a	n/a
15	BRCA1	chr6:36515119-36515205	HepG2	liver:	n/a	n/a
16	BRCA1	chr6:36514102-36515566	Hela-S3	cervix:	n/a	n/a
17	CBX3	chr6:36514715-36515722	K562	blood:	n/a	n/a
18	CCNT2	chr6:36514943-36515506	K562	blood:	n/a	chr6:36514985-36514994
19	CEBPB	chr6:36493614-36493789	H1-hESC	embryonic stem cell:	n/a	n/a
20	CEBPB	chr6:36491331-36491507	HepG2	liver:	n/a	n/a
21	CEBPB	chr6:36515143-36515402	HepG2	liver:	n/a	n/a
22	CEBPB	chr6:36483806-36484044	HepG2	liver:	n/a	n/a
23	CEBPB	chr6:36515118-36515468	A549	lung:	n/a	n/a
24	CEBPB	chr6:36513890-36514017	H1-hESC	embryonic stem cell:	n/a	n/a
25	CEBPB	chr6:36478758-36478925	K562	blood:	n/a	n/a
26	CEBPB	chr6:36482633-36482885	HepG2	liver:	n/a	n/a
27	CEBPB	chr6:36513708-36514008	IMR90	lung:	n/a	n/a
28	CEBPB	chr6:36513679-36514022	K562	blood:	n/a	n/a
29	CEBPB	chr6:36493568-36493786	K562	blood:	n/a	n/a
30	CEBPB	chr6:36515097-36515445	K562	blood:	n/a	n/a
31	CEBPB	chr6:36515076-36515325	H1-hESC	embryonic stem cell:	n/a	n/a
32	CEBPB	chr6:36493672-36493742	Hela-S3	cervix:	n/a	n/a
33	CEBPB	chr6:36478730-36478986	HepG2	liver:	n/a	n/a
34	CEBPB	chr6:36482603-36482920	HepG2	liver:	n/a	n/a
35	CEBPB	chr6:36482601-36482854	HepG2	liver:	n/a	n/a
36	CEBPB	chr6:36472831-36473131	IMR90	lung:	n/a	n/a
37	CEBPB	chr6:36472914-36473010	K562	blood:	n/a	n/a
38	CEBPB	chr6:36514412-36515465	Hela-S3	cervix:	n/a	n/a
39	CEBPB	chr6:36515116-36515445	HepG2	liver:	n/a	n/a
40	CEBPD	chr6:36515009-36515472	HepG2	liver:	n/a	n/a
41	CEBPD	chr6:36515018-36515493	HepG2	liver:	n/a	n/a
42	CHD1	chr6:36515040-36515626	GM12878	blood:	n/a	n/a
43	CHD1	chr6:36514453-36515032	H1-hESC	embryonic stem cell:	n/a	n/a
44	CHD2	chr6:36514719-36515434	Hela-S3	cervix:	n/a	n/a
45	CHD2	chr6:36515093-36515404	HepG2	liver:	n/a	n/a
46	CHD2	chr6:36515003-36515463	GM12878	blood:	n/a	n/a
47	CHD2	chr6:36515014-36515418	K562	blood:	n/a	n/a
48	CHD2	chr6:36515010-36515531	H1-hESC	embryonic stem cell:	n/a	n/a
49	CREB1	chr6:36514939-36515422	A549	lung:	n/a	n/a
50	CTCF	chr6:36507800-36507950	HVMF	connective:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:36515676-36515726	Hela-S3	cervix:	n/a
2	chr6:36515856-36515906	HUVEC	blood vessel:	n/a
3	chr6:36515153-36515203	NH-A	brain:	n/a
4	chr6:36515380-36515430	AoSMC	blood vessel:	n/a
5	chr6:36515174-36515224	Hela-S3	cervix:	n/a
6	chr6:36515007-36515057	HRPEpiC	eye:	n/a
7	chr6:36515386-36515436	HUVEC	blood vessel:	n/a
8	chr6:36515386-36515436	PANC-1	pancreas:	n/a
9	chr6:36515153-36515203	HRCEpiC	kidney:	n/a
10	chr6:36515153-36515203	AG09319	gingival:	n/a
11	chr6:36514552-36514602	HepG2	liver:	n/a
12	chr6:36515386-36515436	ovcar-3	ovarian:	n/a
13	chr6:36514552-36514602	HRPEpiC	eye:	n/a
14	chr6:36492993-36493043	Hela-S3	cervix:	n/a
15	chr6:36514552-36514602	PrEC	prostate:	n/a
16	chr6:36515856-36515906	AG10803	skin:	n/a
17	chr6:36514552-36514602	MCF10A-Er-Src	breast:	n/a
18	chr6:36515174-36515224	Jurkat	blood:	n/a
19	chr6:36492993-36493043	PANC-1	pancreas:	n/a
20	chr6:36515007-36515057	K562	blood:	n/a
21	chr6:36515007-36515057	SKMC	muscle:	n/a
22	chr6:36515386-36515436	AG04450	lung:	fetal
23	chr6:36515153-36515203	SK-N-SH_RA	brain:	n/a
24	chr6:36515007-36515057	HEEpiC	esophagus:	n/a
25	chr6:36515676-36515726	SK-N-SH_RA	brain:	n/a
26	chr6:36515856-36515906	GM19239	blood:	n/a
27	chr6:36515676-36515726	H1-hESC	embryonic stem cell:	embryo
28	chr6:36515676-36515726	Jurkat	blood:	n/a
29	chr6:36515676-36515726	PANC-1	pancreas:	n/a
30	chr6:36514552-36514602	SK-N-SH	brain:	n/a
31	chr6:36492993-36493043	AG09309	skin:	n/a
32	chr6:36515676-36515726	U87	brain:	n/a
33	chr6:36515007-36515057	HUVEC	blood vessel:	n/a
34	chr6:36515386-36515436	HRPEpiC	eye:	n/a
35	chr6:36515676-36515726	T-47D	breast:	n/a
36	chr6:36514552-36514602	AG09309	skin:	n/a
37	chr6:36515174-36515224	AG10803	skin:	n/a
38	chr6:36515386-36515436	HMEC	breast:	n/a
39	chr6:36515007-36515057	Hela-S3	cervix:	n/a
40	chr6:36514552-36514602	Hela-S3	cervix:	n/a
41	chr6:36515153-36515203	HCM	heart:	n/a
42	chr6:36515380-36515430	AG10803	skin:	n/a
43	chr6:36515386-36515436	SK-N-SH_RA	brain:	n/a
44	chr6:36515676-36515726	PrEC	prostate:	n/a
45	chr6:36492993-36493043	GM12878	blood:	n/a
46	chr6:36515007-36515057	GM12892	blood:	n/a
47	chr6:36492993-36493043	U87	brain:	n/a
48	chr6:36515380-36515430	IMR90	lung:	fetal
49	chr6:36515676-36515726	HL-60	blood:	n/a
50	chr6:36514552-36514602	SKMC	muscle:	n/a

(count:98 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:36497374..36500169-chr6:36502662..36504690,2	MCF-7	breast:
2	chr6:36513370..36515088-chr6:36555840..36557941,2	MCF-7	breast:
3	chr6:36490465..36493524-chr6:36513455..36516315,3	MCF-7	breast:
4	chr6:36495266..36496953-chr6:36513612..36515337,2	MCF-7	breast:
5	chr6:36492107..36493625-chr6:36501687..36504348,2	K562	blood:
6	chr6:36409674..36412484-chr6:36506598..36508261,2	MCF-7	breast:
7	chr6:36409184..36410963-chr6:36513836..36516900,3	K562	blood:
8	chr6:36485725..36489611-chr6:36564502..36569301,6	K562	blood:
9	chr6:36483451..36486025-chr6:36561545..36563381,2	MCF-7	breast:
10	chr6:36496113..36499007-chr6:36502464..36504767,2	K562	blood:
11	chr6:36409257..36411795-chr6:36501759..36504457,2	MCF-7	breast:
12	chr6:36458313..36460824-chr6:36485025..36486627,2	K562	blood:
13	chr6:36472144..36476208-chr6:36480337..36484283,3	MCF-7	breast:
14	chr6:36470331..36472950-chr6:36474034..36477426,3	K562	blood:
15	chr6:36482340..36485371-chr6:36486077..36489751,4	K562	blood:
16	chr6:36511702..36513578-chr6:36513604..36515650,2	MCF-7	breast:
17	chr6:36497374..36500169-chr6:36502662..36504690,2	MCF-7	breast:
18	chr6:36409564..36413749-chr6:36473812..36477926,5	K562	blood:
19	chr6:36478422..36481573-chr6:36513785..36517624,3	K562	blood:
20	chr6:36475084..36480133-chr6:36561035..36564418,5	MCF-7	breast:
21	chr6:36469824..36471585-chr6:36560977..36562520,2	K562	blood:
22	chr6:36510774..36513528-chr6:36514327..36515918,2	MCF-7	breast:
23	chr6:36504738..36508303-chr6:36559750..36564175,7	MCF-7	breast:
24	chr6:36499421..36501697-chr6:36506159..36509131,2	MCF-7	breast:
25	chr6:36492328..36495543-chr6:36512590..36515931,4	K562	blood:
26	chr6:36487982..36489782-chr6:36491211..36493166,2	K562	blood:
27	chr6:36501848..36504385-chr6:36507830..36509604,2	MCF-7	breast:
28	chr6:36499811..36502990-chr6:36505261..36508061,3	MCF-7	breast:
29	chr6:36499811..36502990-chr6:36505261..36508061,3	MCF-7	breast:
30	chr6:36472144..36476208-chr6:36480337..36484283,3	MCF-7	breast:
31	chr6:36389979..36392367-chr6:36513039..36514826,2	MCF-7	breast:
32	chr6:36492107..36493625-chr6:36501687..36504348,2	K562	blood:
33	chr6:36513256..36514925-chr6:36570218..36572859,3	K562	blood:
34	chr6:36487455..36494660-chr6:36559051..36563997,8	MCF-7	breast:
35	chr6:36470157..36472950-chr6:36474808..36477426,3	K562	blood:
36	chr6:36510007..36526277-chr6:36558145..36566762,35	K562	blood:
37	chr6:36456606..36458436-chr6:36487070..36489141,2	K562	blood:
38	chr6:36485725..36489051-chr6:36564502..36569279,5	K562	blood:
39	chr6:36508084..36510541-chr6:36513310..36516168,2	MCF-7	breast:
40	chr6:36512892..36514638-chr6:36529492..36532475,2	K562	blood:
41	chr6:36479455..36482254-chr6:36484077..36487230,3	K562	blood:
42	chr6:36478709..36482254-chr6:36484077..36487660,3	K562	blood:
43	chr6:36501299..36502934-chr6:36521260..36523247,2	MCF-7	breast:
44	chr6:36409344..36412329-chr6:36513269..36516052,4	MCF-7	breast:
45	chr6:36496113..36499007-chr6:36502464..36504767,2	K562	blood:
46	chr6:36466098..36468540-chr6:36473344..36475324,2	K562	blood:
47	chr6:36461218..36463551-chr6:36470989..36472982,2	K562	blood:
48	chr6:36515055..36515860-chr8:126442339..126442957,2	HCT-116	colon:
49	chr6:36479455..36482254-chr6:36484077..36487230,3	K562	blood:
50	chr6:36487982..36489782-chr6:36491211..36493166,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KCTD20-3	chr6:36489968-36490275	NONHSAT112223

No data

Variant related genes	Relation type
RN7SL748P	TF binding region
ENSG00000264878	TF binding region
STK38	TF binding region
RN7SL748P	CpG island
ENSG00000264878	CpG island
STK38	CpG island
ENSG00000239964	chromatin interactions
ENSG00000112081	chromatin interactions
ENSG00000112078	chromatin interactions
ENSG00000112079	chromatin interactions
ENSG00000179165	chromatin interactions
ENSG00000264878	chromatin interactions
ENSG00000231050	chromatin interactions
ENSG00000158201	chromatin interactions
ENSG00000173334	chromatin interactions

Extended variants
information (count: 1737 )
Associated
traits (count: 108 )

Variant overlapped rSNPs/rCNVs (count:1737 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs556815279	chr6:36471490-36471491	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs561425322	chr6:36471520-36471521	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs35393345	chr6:36471532-36471533	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs528710453	chr6:36471547-36471548	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs374768991	chr6:36471566-36471567	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs3216497	chr6:36471585-36471586	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs373349957	chr6:36471586-36471587	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs397784737	chr6:36471587-36471588	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs111926050	chr6:36471618-36471619	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs191194707	chr6:36471620-36471621	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs9470300	chr6:36471639-36471640	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs560304467	chr6:36471646-36471647	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs572999376	chr6:36471651-36471652	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs183397695	chr6:36471741-36471742	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs539923635	chr6:36471787-36471788	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs555456579	chr6:36471810-36471811	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs570234402	chr6:36471823-36471824	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs9462190	chr6:36471934-36471935	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs187692002	chr6:36471958-36471959	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs141475156	chr6:36472042-36472043	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs192749149	chr6:36472092-36472093	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs564492502	chr6:36472112-36472113	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs528699332	chr6:36472135-36472136	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs184263943	chr6:36472219-36472220	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs621796	chr6:36472259-36472260	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs533598419	chr6:36472267-36472268	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs529246423	chr6:36472285-36472286	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs2267932	chr6:36472349-36472350	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
29	rs9357215	chr6:36472354-36472355	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs147508272	chr6:36472430-36472431	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs116513113	chr6:36472481-36472482	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs150846301	chr6:36472490-36472491	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs77171963	chr6:36472492-36472493	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs536015061	chr6:36472521-36472522	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs377643761	chr6:36472524-36472525	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs558055533	chr6:36472548-36472549	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs566516464	chr6:36472650-36472651	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs534028914	chr6:36472666-36472667	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs562032331	chr6:36472676-36472677	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs555150044	chr6:36472690-36472691	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs677593	chr6:36472696-36472697	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs563573162	chr6:36472698-36472699	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs34771559	chr6:36472699-36472700	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs374774955	chr6:36472708-36472709	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs2267931	chr6:36472709-36472710	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs544331342	chr6:36472714-36472715	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs9470301	chr6:36472717-36472718	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs2267930	chr6:36472788-36472789	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs188378116	chr6:36472912-36472913	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs564834776	chr6:36472928-36472929	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:108)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Lung cancer	19153074	CNVD
Breast cancer	22522925	CNVD
Autism	20531469	CNVD
Pancreatic cancer	17952125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:2275 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:36411600-36476400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:36430800-36488800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr6:36437800-36477600	Strong transcription	Fetal Thymus	thymus
4	chr6:36447200-36477600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr6:36447400-36477800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr6:36450000-36479800	Weak transcription	Stomach Mucosa	stomach
7	chr6:36455200-36476400	Weak transcription	Pancreas	Pancrea
8	chr6:36456400-36512600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr6:36457400-36484400	Weak transcription	Right Atrium	heart
10	chr6:36461200-36472200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr6:36461200-36475400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
12	chr6:36461200-36475400	Strong transcription	Primary B cells from peripheral blood	blood
13	chr6:36461400-36481400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr6:36461600-36476400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr6:36462200-36473200	Weak transcription	Fetal Heart	heart
16	chr6:36462200-36477800	Strong transcription	Primary hematopoietic stem cells	blood
17	chr6:36462600-36471600	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
18	chr6:36462600-36477400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr6:36462800-36472800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr6:36462800-36473000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr6:36462800-36473000	Strong transcription	Primary T helper cells fromperipheralblood	blood
22	chr6:36462800-36475000	Strong transcription	Primary T cells fromperipheralblood	blood
23	chr6:36463000-36507200	Weak transcription	Fetal Brain Male	brain
24	chr6:36463600-36472800	Strong transcription	Primary T helper cells PMA-I stimulated	--
25	chr6:36463600-36473000	Strong transcription	Primary neutrophils fromperipheralblood	blood
26	chr6:36463600-36476400	Weak transcription	Brain Angular Gyrus	brain
27	chr6:36463600-36493600	Strong transcription	Monocytes-CD14+_RO01746	blood
28	chr6:36463800-36473000	Weak transcription	Brain Anterior Caudate	brain
29	chr6:36463800-36473400	Weak transcription	Small Intestine	intestine
30	chr6:36463800-36478000	Weak transcription	Brain Cingulate Gyrus	brain
31	chr6:36463800-36493400	Strong transcription	Primary monocytes fromperipheralblood	blood
32	chr6:36463800-36513600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
33	chr6:36464200-36475000	Weak transcription	Right Ventricle	heart
34	chr6:36464200-36477600	Weak transcription	H9 Cell Line	embryonic stem cell
35	chr6:36464800-36473000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr6:36465200-36477800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr6:36465400-36473200	Weak transcription	Brain Substantia Nigra	brain
38	chr6:36465400-36477400	Weak transcription	NHEK	skin
39	chr6:36465400-36477600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr6:36465400-36477600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr6:36465600-36473000	Weak transcription	H1 Cell Line	embryonic stem cell
42	chr6:36465600-36489800	Weak transcription	Psoas Muscle	Psoas
43	chr6:36467400-36476200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr6:36467800-36471600	Weak transcription	HUVEC	blood vessel
45	chr6:36467800-36472600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
46	chr6:36467800-36472600	Weak transcription	Skeletal Muscle Female	skeletal muscle
47	chr6:36467800-36472800	Weak transcription	Cortex derived primary cultured neurospheres	brain
48	chr6:36467800-36473200	Weak transcription	Brain Hippocampus Middle	brain
49	chr6:36467800-36473200	Weak transcription	HSMMtube	muscle
50	chr6:36467800-36473400	Weak transcription	Stomach Smooth Muscle	stomach

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