Variant report

Variant	nsv527032
Chromosome Location	chr8:120433976-120449997
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:120442388..120445344-chr8:120446102..120448402,2	MCF-7	breast:
2	chr8:120442388..120445344-chr8:120446102..120448402,2	MCF-7	breast:
3	chr8:120098575..120099274-chr8:120449593..120450158,2	MCF-7	breast:
4	chr8:120432511..120434359-chr8:120436163..120438609,3	K562	blood:
5	chr5:43105551..43106214-chr8:120449751..120450260,2	MCF-7	breast:
6	chr8:120432511..120435725-chr8:120436931..120439834,3	K562	blood:
7	chr8:120432511..120435725-chr8:120436931..120439834,3	K562	blood:
8	chr8:120098391..120099543-chr8:120449221..120451236,7	MCF-7	breast:
9	chr8:120276055..120276717-chr8:120449150..120449673,2	MCF-7	breast:
10	chr8:120448205..120448941-chrX:107919332..107920056,2	MCF-7	breast:
11	chr8:120275813..120276422-chr8:120449390..120450263,3	MCF-7	breast:
12	chr8:120432511..120434359-chr8:120436163..120438609,3	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ENPP2-1	chr8:120443189-120443263	ENSG00000253398.1

No data

Extended variants
information (count: 634 )
Associated
traits (count: 137 )

Variant overlapped rSNPs/rCNVs (count:634 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7816205	chr8:120433976-120433977	Weak transcription Genic enhancers Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs1381336	chr8:120433983-120433984	Weak transcription Genic enhancers Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs7816347	chr8:120434043-120434044	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs368246785	chr8:120434080-120434081	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs569571755	chr8:120434106-120434107	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs72684298	chr8:120434119-120434120	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs17791334	chr8:120434128-120434129	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs1381337	chr8:120434160-120434161	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs534357473	chr8:120434176-120434177	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs79531671	chr8:120434194-120434195	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs574471791	chr8:120434230-120434231	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs77948511	chr8:120434279-120434280	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs185579726	chr8:120434283-120434284	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs140650143	chr8:120434308-120434309	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs544125018	chr8:120434314-120434315	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs78129242	chr8:120434319-120434320	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs566091994	chr8:120434387-120434388	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs550305385	chr8:120434396-120434397	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs375613189	chr8:120434397-120434398	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs577146415	chr8:120434400-120434401	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs78634302	chr8:120434402-120434403	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs76032531	chr8:120434404-120434405	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs201055059	chr8:120434412-120434413	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs117433806	chr8:120434420-120434421	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs77504886	chr8:120434432-120434433	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs368513537	chr8:120434433-120434434	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs113386747	chr8:120434500-120434501	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs559763063	chr8:120434510-120434511	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs530145942	chr8:120434564-120434565	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs530529672	chr8:120434574-120434575	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs563137848	chr8:120434575-120434576	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs144365722	chr8:120434606-120434607	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs530656426	chr8:120434634-120434635	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs368160279	chr8:120434661-120434662	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs17187655	chr8:120434684-120434685	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs371674221	chr8:120434693-120434694	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs190432361	chr8:120434731-120434732	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs543737221	chr8:120434745-120434746	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs74605017	chr8:120434776-120434777	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs546297065	chr8:120434788-120434789	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs555884397	chr8:120434843-120434844	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs1461690	chr8:120434853-120434854	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs182768754	chr8:120434860-120434861	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs187454226	chr8:120434875-120434876	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs192101089	chr8:120434877-120434878	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs537669883	chr8:120434897-120434898	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs560196657	chr8:120434933-120434934	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs559265960	chr8:120434939-120434940	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs142401154	chr8:120434947-120434948	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs183924862	chr8:120434949-120434950	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:137)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Gastric cancer	17908304	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	17603634	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Breast cancer	21611746	CNVD
Developmental delay	21147756	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Non-small cell lung cancer	19010865	CNVD
small cell lung cancer	20016488	CNVD
Chronic myeloid leukemia	21384125	CNVD
Papillary thyroid cancer	17515504	CNVD
Basal cell lymphoma	17053054	CNVD
Cancer	20164920	CNVD
Breast cancer	20932292	CNVD
Gastric cancer	22539939	CNVD
Breast cancer	22056952	CNVD
Langer-Giedion syndrome	16773131	CNVD
Lung cancer	16740712	CNVD
Mental retardation	16773131	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Langer-Giedion syndrome	22470819	CNVD
Cornelia de Lange syndrome	24599119	CNVD
Gastric cancer	21528007	CNVD
Breast cancer	22532251	CNVD
Cervical cancer	21062161	CNVD
Cancer	21129771	CNVD
benign familial neonatal convulsions	18472482	CNVD
Breast cancer	16417655	CNVD
Astrocytoma	17387387	CNVD
Cancer	21183584	CNVD
Follicular lymphoma	20505157	CNVD
T-cell lymphomas	19863542	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	20607354	CNVD
Breast cancer	20814816	CNVD
Colorectal cancer	22486879	CNVD
Breast cancer	17908964	CNVD
Colorectal cancer	20031965	CNVD
Hepatocellular carcinoma	16750200	CNVD
Ovarian cancer	17908964	CNVD
Ovarian cancer	20031965	CNVD
Prostate cancer	20031965	CNVD
Non-small cell lung cancer	17643093	CNVD
Prostate cancer	19242612	CNVD
Colorectal cancer	16774939	CNVD
Multiple myeloma	17550852	CNVD
Glioblastoma multiforme	18628472	CNVD
Malignant melanoma	17260012	CNVD
Breast cancer	18698023	CNVD
Multiple myeloma	16461302	CNVD
Uveal melanoma	20484589	CNVD
head and neck squamous cell carcinoma	16740747	CNVD
Breast cancer	19181860	CNVD
Endometrial cancer	23636398	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	16397240	CNVD
Multiple myeloma	16616336	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Oral squamous cell carcinoma	21853135	CNVD
Prostate cancer	22341455	CNVD

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:120429400-120435200	Weak transcription	Pancreas	Pancrea
2	chr8:120429600-120435200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:120429600-120436800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:120429600-120437200	Weak transcription	NHLF	lung
5	chr8:120429800-120435200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr8:120429800-120436800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr8:120429800-120437000	Weak transcription	Fetal Stomach	stomach
8	chr8:120429800-120437400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr8:120430600-120437800	Weak transcription	Hela-S3	cervix
10	chr8:120431000-120439600	Weak transcription	NHDF-Ad	bronchial
11	chr8:120431800-120434000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr8:120432000-120437000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr8:120432600-120434400	Weak transcription	Fetal Muscle Trunk	muscle
14	chr8:120432600-120435200	Strong transcription	Fetal Muscle Leg	muscle
15	chr8:120432600-120438200	Weak transcription	Fetal Lung	lung
16	chr8:120432800-120437000	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr8:120433000-120438400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr8:120433600-120434000	Enhancers	Aorta	Aorta
19	chr8:120434000-120434400	Weak transcription	Aorta	Aorta
20	chr8:120434000-120435000	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr8:120434400-120435400	ZNF genes & repeats	Aorta	Aorta
22	chr8:120434400-120436000	Strong transcription	Fetal Muscle Trunk	muscle
23	chr8:120435000-120435600	Genic enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr8:120435000-120436800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr8:120435200-120435400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr8:120435200-120435400	Genic enhancers	Fetal Muscle Leg	muscle
27	chr8:120435200-120435400	ZNF genes & repeats	Pancreas	Pancrea
28	chr8:120435200-120436000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr8:120435400-120436800	Weak transcription	Aorta	Aorta
30	chr8:120435400-120437000	Weak transcription	Pancreas	Pancrea
31	chr8:120435400-120438400	Weak transcription	Fetal Muscle Leg	muscle
32	chr8:120435600-120438000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr8:120435800-120436000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr8:120436000-120439000	Weak transcription	Fetal Muscle Trunk	muscle
35	chr8:120436000-120439600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr8:120436000-120439800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr8:120436400-120436800	Weak transcription	Sigmoid Colon	Sigmoid Colon
38	chr8:120436800-120437000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr8:120436800-120437000	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
40	chr8:120436800-120437000	Enhancers	Sigmoid Colon	Sigmoid Colon
41	chr8:120436800-120437400	Enhancers	Aorta	Aorta
42	chr8:120436800-120439000	Enhancers	iPS-15b Cell Line	embryonic stem cell
43	chr8:120436800-120439000	Enhancers	iPS-18 Cell Line	embryonic stem cell
44	chr8:120436800-120439400	Enhancers	ES-I3 Cell Line	embryonic stem cell
45	chr8:120437000-120437200	Enhancers	Fetal Stomach	stomach
46	chr8:120437000-120437200	Enhancers	Pancreas	Pancrea
47	chr8:120437000-120437400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
48	chr8:120437000-120437800	Enhancers	HUES6 Cell Line	embryonic stem cell
49	chr8:120437000-120437800	Enhancers	iPS-20b Cell Line	embryonic stem cell
50	chr8:120437000-120439000	Enhancers	HUES64 Cell Line	embryonic stem cell

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