Variant report

Variant	nsv527054
Chromosome Location	chr3:556800-1350458
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2561)
CpG islands
(count:917)
Chromatin interactive
region (count:68)
LncRNA
region (count:22)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2561 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr3:1235289-1235354	K562	blood:	n/a	n/a
2	ATF1	chr3:1056506-1056524	K562	blood:	n/a	n/a
3	ATF2	chr3:1172821-1173212	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr3:888492-888519	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:954485-954653	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr3:1135881-1135904	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr3:1249806-1249899	H1-hESC	embryonic stem cell:	n/a	chr3:1249829-1249843
8	BACH1	chr3:577662-577951	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr3:1277576-1277666	H1-hESC	embryonic stem cell:	n/a	n/a
10	BATF	chr3:954370-954767	GM12878	blood:	n/a	chr3:954539-954550 chr3:954567-954578 chr3:954595-954606
11	BATF	chr3:599827-600084	GM12878	blood:	n/a	chr3:599953-599962
12	BATF	chr3:954466-954707	GM12878	blood:	n/a	chr3:954539-954550 chr3:954567-954578 chr3:954595-954606
13	BATF	chr3:638972-639242	GM12878	blood:	n/a	chr3:639093-639102
14	BATF	chr3:892892-893121	GM12878	blood:	n/a	chr3:892988-892999
15	BATF	chr3:599789-600089	GM12878	blood:	n/a	chr3:599953-599962
16	BATF	chr3:892848-893082	GM12878	blood:	n/a	chr3:892988-892999
17	BCL11A	chr3:954445-954734	GM12878	blood:	n/a	n/a
18	BCL3	chr3:1149010-1149230	GM12878	blood:	n/a	n/a
19	BCLAF1	chr3:599656-600200	GM12878	blood:	n/a	chr3:599779-599788 chr3:599826-599835
20	BHLHE40	chr3:943924-944164	GM12878	blood:	n/a	n/a
21	BHLHE40	chr3:895419-895457	GM12878	blood:	n/a	n/a
22	BHLHE40	chr3:846853-846863	GM12878	blood:	n/a	n/a
23	BRCA1	chr3:817416-817453	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr3:649451-649478	Hela-S3	cervix:	n/a	n/a
25	BRCA1	chr3:1123741-1124044	Hela-S3	cervix:	n/a	n/a
26	BRCA1	chr3:961437-961458	GM12878	blood:	n/a	n/a
27	BRCA1	chr3:815996-816027	Hela-S3	cervix:	n/a	n/a
28	BRCA1	chr3:1128644-1129340	Hela-S3	cervix:	n/a	n/a
29	BRCA1	chr3:754720-755580	Hela-S3	cervix:	n/a	n/a
30	BRCA1	chr3:991509-991520	H1-hESC	embryonic stem cell:	n/a	n/a
31	BRCA1	chr3:1225226-1225621	Hela-S3	cervix:	n/a	n/a
32	BRCA1	chr3:674381-674581	H1-hESC	embryonic stem cell:	n/a	n/a
33	BRCA1	chr3:638578-639330	Hela-S3	cervix:	n/a	n/a
34	BRCA1	chr3:639591-639851	Hela-S3	cervix:	n/a	n/a
35	CEBPB	chr3:1285013-1285370	H1-hESC	embryonic stem cell:	n/a	chr3:1285182-1285193
36	CEBPB	chr3:611097-611344	HepG2	liver:	n/a	chr3:611201-611212
37	CEBPB	chr3:1164116-1164342	HepG2	liver:	n/a	chr3:1164197-1164208
38	CEBPB	chr3:1128706-1129408	Hela-S3	cervix:	n/a	chr3:1129164-1129175 chr3:1128961-1128973
39	CEBPB	chr3:766071-766268	HepG2	liver:	n/a	chr3:766173-766184
40	CEBPB	chr3:1189136-1189409	HepG2	liver:	n/a	chr3:1189266-1189277
41	CEBPB	chr3:650024-650224	A549	lung:	n/a	chr3:650073-650084 chr3:650075-650084
42	CEBPB	chr3:672488-672700	HepG2	liver:	n/a	chr3:672554-672567 chr3:672555-672566
43	CEBPB	chr3:746911-747209	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr3:1266757-1267048	HepG2	liver:	n/a	chr3:1266885-1266896
45	CEBPB	chr3:986539-986753	Hela-S3	cervix:	n/a	chr3:986667-986678
46	CEBPB	chr3:650039-650244	HepG2	liver:	n/a	chr3:650073-650084 chr3:650075-650084
47	CEBPB	chr3:920402-920815	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr3:1343908-1344126	HepG2	liver:	n/a	chr3:1344018-1344029 chr3:1344018-1344031
49	CEBPB	chr3:1224983-1225817	Hela-S3	cervix:	n/a	chr3:1225189-1225200 chr3:1225191-1225200 chr3:1225191-1225202 chr3:1225191-1225200 chr3:1225189-1225202 chr3:1225189-1225202 chr3:1225191-1225200 chr3:1225191-1225200
50	CEBPB	chr3:591255-591764	Hela-S3	cervix:	n/a	n/a

(count:917 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:1134528-1134578	Jurkat	blood:	n/a
2	chr3:1134711-1134761	CMK	blood:	n/a
3	chr3:1134528-1134578	Jurkat	blood:	n/a
4	chr3:1134711-1134761	CMK	blood:	n/a
5	chr3:1134711-1134761	HCT-116	colon:	n/a
6	chr3:1173560-1173610	AG09319	gingival:	n/a
7	chr3:782757-782807	ovcar-3	ovarian:	n/a
8	chr3:1134528-1134578	HL-60	blood:	n/a
9	chr3:1050278-1050328	HL-60	blood:	n/a
10	chr3:782757-782807	SK-N-SH_RA	brain:	n/a
11	chr3:1133865-1133915	K562	blood:	n/a
12	chr3:1284705-1284755	Hela-S3	cervix:	n/a
13	chr3:1173560-1173610	SK-N-SH_RA	brain:	n/a
14	chr3:1134528-1134578	GM12878	blood:	n/a
15	chr3:1202463-1202513	ProgFib	skin:	n/a
16	chr3:577821-577871	T-47D	breast:	n/a
17	chr3:1173560-1173610	RPTEC	kidney:	n/a
18	chr3:1050278-1050328	SK-N-SH_RA	brain:	n/a
19	chr3:1134366-1134416	PrEC	prostate:	n/a
20	chr3:1284705-1284755	HCF	heart:	n/a
21	chr3:1134366-1134416	GM06990	blood:	n/a
22	chr3:577964-578014	AG10803	skin:	n/a
23	chr3:1133865-1133915	BJ	skin:	n/a
24	chr3:1229376-1229426	SK-N-SH	brain:	n/a
25	chr3:1134005-1134055	HNPCEpiC	eye:	n/a
26	chr3:1134730-1134780	ovcar-3	ovarian:	n/a
27	chr3:1229376-1229426	NB4	blood:	n/a
28	chr3:1134730-1134780	GM12892	blood:	n/a
29	chr3:577821-577871	SK-N-SH_RA	brain:	n/a
30	chr3:1134366-1134416	HEK293	kidney:	embryo
31	chr3:1284705-1284755	GM19239	blood:	n/a
32	chr3:1284705-1284755	HNPCEpiC	eye:	n/a
33	chr3:1133865-1133915	NHDF-neo	bronchial:	n/a
34	chr3:577629-577679	MCF-7	breast:	n/a
35	chr3:577964-578014	HRPEpiC	eye:	n/a
36	chr3:1284705-1284755	SK-N-SH	brain:	n/a
37	chr3:1173560-1173610	SK-N-MC	brain:	n/a
38	chr3:577629-577679	PFSK-1	brain:	n/a
39	chr3:577629-577679	HNPCEpiC	eye:	n/a
40	chr3:1202463-1202513	AoSMC	blood vessel:	n/a
41	chr3:1134711-1134761	GM12878	blood:	n/a
42	chr3:1284705-1284755	Hepatocyte	liver:	n/a
43	chr3:1229376-1229426	HL-60	blood:	n/a
44	chr3:1229376-1229426	HCPEpiC	choroid plexus:	n/a
45	chr3:1134730-1134780	MCF-7	breast:	n/a
46	chr3:1229376-1229426	U87	brain:	n/a
47	chr3:1284705-1284755	HRCEpiC	kidney:	n/a
48	chr3:577821-577871	MCF10A-Er-Src	breast:	n/a
49	chr3:577821-577871	CMK	blood:	n/a
50	chr3:1133865-1133915	ECC-1	luminal epithelium:	n/a

(count:68 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr21:9533639..9536328-chr3:614645..617390,2	MCF-7	breast:
2	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
3	chr3:1145760..1147872-chr3:1156472..1158821,2	K562	blood:
4	chr3:829999..831597-chr3:832456..834541,2	MCF-7	breast:
5	chr3:805612..808013-chr3:811141..813375,2	K562	blood:
6	chr3:950629..951227-chr3:2029405..2030169,2	MCF-7	breast:
7	chr3:844122..846364-chr3:847958..849773,2	K562	blood:
8	chr3:674217..674800-chr3:1123463..1123990,2	MCF-7	breast:
9	chr3:829999..831597-chr3:832456..834541,2	MCF-7	breast:
10	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
11	chr3:1271635..1273502-chr3:1276225..1279196,2	K562	blood:
12	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
13	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
14	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
15	chr3:703062..705164-chr3:828470..830008,2	K562	blood:
16	chr21:9537493..9539688-chr3:612236..614804,2	MCF-7	breast:
17	chr3:1185425..1187107-chr3:1188609..1190735,2	K562	blood:
18	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
19	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
20	chr3:674203..674975-chr3:2197712..2198482,2	MCF-7	breast:
21	chr3:844122..846364-chr3:847958..849773,2	K562	blood:
22	chr3:674217..674800-chr3:1123463..1123990,2	MCF-7	breast:
23	chr3:805612..808013-chr3:811141..813375,2	K562	blood:
24	chr12:101154422..101155178-chr3:753774..754622,2	MCF-7	breast:
25	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
26	chr2:44471645..44472524-chr3:1084585..1085105,2	K562	blood:
27	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
28	chr12:51631069..51633376-chr3:1005382..1008189,2	MCF-7	breast:
29	chr3:1123403..1124144-chr3:2029373..2030343,3	MCF-7	breast:
30	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
31	chr3:1233578..1235618-chr3:1243417..1246040,2	K562	blood:
32	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
33	chr21:9517250..9519290-chr3:632442..635070,2	MCF-7	breast:
34	chr3:1183195..1185033-chr3:1185128..1187712,2	MCF-7	breast:
35	chr3:1091106..1092914-chr3:1094575..1097571,2	K562	blood:
36	chr3:1017513..1019704-chr9:130832900..130835546,2	MCF-7	breast:
37	chr3:1089175..1092606-chr3:1092889..1096075,3	K562	blood:
38	chr3:1091106..1092914-chr3:1094575..1097571,2	K562	blood:
39	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
40	chr3:1271635..1274308-chr3:1276225..1277746,2	K562	blood:
41	chr20:19743891..19744638-chr3:1326228..1327123,2	MCF-7	breast:
42	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
43	chr3:1049665..1052589-chr3:1054165..1056315,2	K562	blood:
44	chr3:1271635..1274308-chr3:1276225..1277746,2	K562	blood:
45	chr3:1145760..1147872-chr3:1156472..1158821,2	K562	blood:
46	chr17:59489294..59491290-chr3:1177376..1179707,2	MCF-7	breast:
47	chr3:1185425..1187107-chr3:1188609..1190735,2	K562	blood:
48	chr3:751166..753010-chr3:765105..767568,2	K562	blood:
49	chr20:12921782..12922300-chr3:762237..762760,2	MCF-7	breast:
50	chr3:943774..944505-chr3:1390119..1390838,2	MCF-7	breast:

(count:22 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CNTN6-2	chr3:898848-898956	NONHSAT087575
2	lnc-CHL1-6	chr3:608788-608866	ucscGeneNc_uc003boy_1
3	lnc-CHL1-3	chr3:577936-578010	ENSG00000224957
4	lnc-CHL1-3	chr3:577941-579275	NONHSAT087570
5	lnc-CHL1-3	chr3:882398-882493	NR_110118
6	lnc-CHL1-3	chr3:791898-791933	NR_110118
7	lnc-CHL1-3	chr3:633788-633866	NR_110118
8	lnc-CNTN6-2	chr3:899428-899774	XLOC_002565
9	lnc-CNTN6-1	chr3:1051052-1054618	XLOC_002566
10	lnc-CHL1-6	chr3:857398-857493	ucscGeneNc_uc003boy_1
11	lnc-CHL1-3	chr3:884059-884327	ENSG00000224957
12	lnc-CNTN6-1	chr3:1049819-1049950	XLOC_002566
13	lnc-CHL1-3	chr3:633788-633866	ENSG00000224957
14	lnc-CHL1-6	chr3:766898-766933	ucscGeneNc_uc003boy_1
15	lnc-CNTN6-2	chr3:899428-900630	NONHSAT087575
16	lnc-CHL1-3	chr3:884059-887698	NR_110118
17	lnc-IL5RA-13	chr3:1107266-1107559	NONHSAT087577
18	lnc-CHL1-6	chr3:859059-862698	ucscGeneNc_uc003boy_1
19	lnc-CHL1-3	chr3:791898-791933	ENSG00000224957
20	lnc-CHL1-3	chr3:868690-868816	ENSG00000224957
21	lnc-IL5RA-14	chr3:659472-659997	NONHSAT087571
22	lnc-CNTN6-2	chr3:898807-898956	XLOC_002565

No data

Variant related genes	Relation type
RN7SL120P	TF binding region
CNTN6	TF binding region
ENSG00000235158	TF binding region
ENSG00000224957	TF binding region
ENSG00000224239	TF binding region
ENSG00000238075	TF binding region
RN7SL120P	CpG island
CNTN6	CpG island
ENSG00000235158	CpG island
ENSG00000224957	CpG island
ENSG00000224239	CpG island
ENSG00000238075	CpG island
ENSG00000183283	chromatin interactions
ENSG00000235158	chromatin interactions
COPS7A	miRNA target sites
IL10	miRNA target sites
HIF1A	miRNA target sites
CPEB4	miRNA target sites
DCBLD2	miRNA target sites

Extended variants
information (count: 13742 )
Associated
traits (count: 98 )

Variant overlapped rSNPs/rCNVs (count:13742 , 50 per page) page: 1 2 3 4 5 6 7 ... 275

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs558746089	chr3:560624-560625	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs577331141	chr3:560658-560659	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs138192487	chr3:560690-560691	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs541238818	chr3:560710-560711	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs530417362	chr3:560714-560715	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs542283036	chr3:560792-560793	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs112982488	chr3:560818-560819	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs9871075	chr3:560819-560820	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs9856277	chr3:560824-560825	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs186269698	chr3:560860-560861	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs564284268	chr3:560865-560866	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs528228331	chr3:560920-560921	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs142198644	chr3:560961-560962	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs145919369	chr3:560974-560975	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs535726947	chr3:561012-561013	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs535939539	chr3:561017-561018	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs550186505	chr3:561037-561038	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs117149888	chr3:561048-561049	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs539160615	chr3:561059-561060	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs191006996	chr3:561089-561090	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs577370726	chr3:561101-561102	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs557520305	chr3:561113-561114	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs534952954	chr3:561130-561131	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs553521456	chr3:561153-561154	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs576184340	chr3:561213-561214	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs148224369	chr3:561217-561218	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs563688790	chr3:561240-561241	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs558727070	chr3:561252-561253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs575669744	chr3:561269-561270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs373694768	chr3:561271-561272	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs376398680	chr3:561281-561282	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs540950477	chr3:561324-561325	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs367977815	chr3:561326-561327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs564471948	chr3:561332-561333	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs74808713	chr3:561336-561337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs72989702	chr3:561368-561369	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs9860964	chr3:561404-561405	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs181956816	chr3:561410-561411	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs372567874	chr3:561450-561451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs137954421	chr3:561468-561469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs538998959	chr3:561469-561470	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs550957600	chr3:561473-561474	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs566485024	chr3:561494-561495	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs533868448	chr3:561528-561529	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs553318144	chr3:561566-561567	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs66836464	chr3:561589-561590	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs371210406	chr3:561618-561619	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs77007140	chr3:561624-561625	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs75175508	chr3:561641-561642	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs557642348	chr3:561656-561657	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:98)

Disease	PMID	Source
Cancer	20164920	CNVD
Lung cancer	16618734	CNVD
Autism	18349135	CNVD
Breast cancer	20409316	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Intellectual disability	22045946	CNVD
Squamous cell cancer	19607727	CNVD
Gastric adenocarcinoma	19115996	CNVD
sporadic birth defects	19047251	CNVD
Mental retardation	17124404	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Sudden cardiac death	19188705	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Autism	22543975	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Tetralogy of Fallot	22912587	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	20685689	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Lung cancer	18438408	CNVD
Breast cancer	22522925	CNVD
Rectal cancer	20877625	CNVD
cervicovaginal lavage	20877625	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:759 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:560600-561200	Enhancers	Fetal Lung	lung
2	chr3:561200-562200	Weak transcription	Fetal Lung	lung
3	chr3:562600-562800	Enhancers	Fetal Lung	lung
4	chr3:563400-564600	Weak transcription	Aorta	Aorta
5	chr3:564200-564800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr3:564600-564800	Enhancers	Aorta	Aorta
7	chr3:577000-578800	Active TSS	ES-I3 Cell Line	embryonic stem cell
8	chr3:577200-577600	Enhancers	Esophagus	oesophagus
9	chr3:577200-579000	Active TSS	Brain Hippocampus Middle	brain
10	chr3:577400-577600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
11	chr3:577400-577600	ZNF genes & repeats	Fetal Intestine Small	intestine
12	chr3:577400-577800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
13	chr3:577400-578000	Active TSS	iPS-15b Cell Line	embryonic stem cell
14	chr3:577400-578200	ZNF genes & repeats	Lung	lung
15	chr3:577400-578400	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr3:577400-578400	Active TSS	HSMMtube	muscle
17	chr3:577400-578600	Active TSS	HUES48 Cell Line	embryonic stem cell
18	chr3:577400-578600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr3:577400-578600	Active TSS	Fetal Intestine Large	intestine
20	chr3:577400-578800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr3:577400-578800	Active TSS	Colon Smooth Muscle	Colon
22	chr3:577400-578800	Active TSS	Fetal Muscle Trunk	muscle
23	chr3:577400-578800	Active TSS	Rectal Smooth Muscle	rectum
24	chr3:577400-578800	Active TSS	Skeletal Muscle Female	skeletal muscle
25	chr3:577400-579000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr3:577400-579000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr3:577400-579000	Active TSS	Fetal Kidney	kidney
28	chr3:577400-579000	Active TSS	Pancreatic Islets	Pancreatic Islet
29	chr3:577400-579000	Active TSS	Stomach Smooth Muscle	stomach
30	chr3:577400-579000	Active TSS	NHLF	lung
31	chr3:577600-578200	Active TSS	Primary hematopoietic stem cells short term culture	blood
32	chr3:577600-578200	Active TSS	Esophagus	oesophagus
33	chr3:577600-578200	Bivalent/Poised TSS	Fetal Adrenal Gland	Adrenal Gland
34	chr3:577600-578200	Active TSS	Fetal Brain Female	brain
35	chr3:577600-578400	Active TSS	HUES6 Cell Line	embryonic stem cell
36	chr3:577600-578400	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr3:577600-578400	Active TSS	Cortex derived primary cultured neurospheres	brain
38	chr3:577600-578400	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr3:577600-578400	Active TSS	Adipose Nuclei	Adipose
40	chr3:577600-578400	Active TSS	Psoas Muscle	Psoas
41	chr3:577600-578400	Active TSS	HSMM	muscle
42	chr3:577600-578600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
43	chr3:577600-578600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr3:577600-578600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr3:577600-578600	Active TSS	Muscle Satellite Cultured Cells	--
46	chr3:577600-578800	Active TSS	Aorta	Aorta
47	chr3:577600-578800	Active TSS	Duodenum Smooth Muscle	Duodenum
48	chr3:577600-578800	Active TSS	Fetal Intestine Small	intestine
49	chr3:577600-578800	Active TSS	Fetal Lung	lung
50	chr3:577600-578800	Active TSS	Fetal Muscle Leg	muscle

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