Variant report

Variant	nsv527451
Chromosome Location	chr15:62129809-62340126
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:993)
CpG islands
(count:123)
Chromatin interactive
region (count:65)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:9)

(count:993 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:62164169-62164478	HepG2	liver:	n/a	n/a
2	ARID3A	chr15:62199453-62200154	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:62164156-62164420	K562	blood:	n/a	n/a
4	ARID3A	chr15:62281922-62282216	K562	blood:	n/a	n/a
5	ARID3A	chr15:62180335-62180383	K562	blood:	n/a	n/a
6	ARID3A	chr15:62171569-62171652	HepG2	liver:	n/a	n/a
7	BACH1	chr15:62234203-62234206	K562	blood:	n/a	n/a
8	BACH1	chr15:62281910-62282262	K562	blood:	n/a	n/a
9	BACH1	chr15:62281967-62282167	H1-hESC	embryonic stem cell:	n/a	n/a
10	BATF	chr15:62132271-62132601	GM12878	blood:	n/a	n/a
11	BCL3	chr15:62255882-62256211	GM12878	blood:	n/a	n/a
12	BCLAF1	chr15:62319158-62319771	GM12878	blood:	n/a	chr15:62319715-62319724 chr15:62319302-62319311
13	BHLHE40	chr15:62338355-62338604	GM12878	blood:	n/a	n/a
14	BRCA1	chr15:62164191-62164533	Hela-S3	cervix:	n/a	n/a
15	CBX3	chr15:62185381-62185684	K562	blood:	n/a	n/a
16	CEBPB	chr15:62301279-62301591	HepG2	liver:	n/a	chr15:62301426-62301437 chr15:62301424-62301437 chr15:62301424-62301435
17	CEBPB	chr15:62265786-62266041	A549	lung:	n/a	chr15:62265887-62265898 chr15:62265886-62265897 chr15:62265888-62265897
18	CEBPB	chr15:62197996-62198309	HepG2	liver:	n/a	n/a
19	CEBPB	chr15:62265777-62266054	HepG2	liver:	n/a	chr15:62265887-62265898 chr15:62265886-62265897 chr15:62265888-62265897
20	CEBPB	chr15:62281886-62282169	K562	blood:	n/a	n/a
21	CEBPB	chr15:62266744-62266785	HepG2	liver:	n/a	n/a
22	CEBPB	chr15:62130645-62130664	HepG2	liver:	n/a	n/a
23	CEBPB	chr15:62225483-62225689	K562	blood:	n/a	chr15:62225584-62225597 chr15:62225586-62225597 chr15:62225531-62225544 chr15:62225584-62225597 chr15:62225584-62225597 chr15:62225586-62225597
24	CEBPB	chr15:62301289-62301563	A549	lung:	n/a	chr15:62301426-62301437 chr15:62301424-62301437 chr15:62301424-62301435
25	CEBPB	chr15:62180307-62180564	HepG2	liver:	n/a	chr15:62180454-62180465
26	CEBPB	chr15:62171161-62171355	HepG2	liver:	n/a	chr15:62171168-62171181
27	CEBPB	chr15:62180336-62180636	A549	lung:	n/a	chr15:62180454-62180465
28	CEBPB	chr15:62227701-62228189	K562	blood:	n/a	chr15:62227893-62227904
29	CEBPB	chr15:62180280-62180649	IMR90	lung:	n/a	chr15:62180454-62180465
30	CEBPB	chr15:62275251-62275629	MCF-7	breast:	n/a	chr15:62275465-62275476
31	CEBPB	chr15:62302567-62302836	IMR90	lung:	n/a	chr15:62302710-62302721
32	CEBPB	chr15:62227747-62228056	Hela-S3	cervix:	n/a	chr15:62227893-62227904
33	CEBPB	chr15:62275283-62275661	Hela-S3	cervix:	n/a	chr15:62275465-62275476
34	CEBPB	chr15:62312273-62312326	K562	blood:	n/a	n/a
35	CEBPB	chr15:62302565-62302878	HepG2	liver:	n/a	chr15:62302710-62302721
36	CEBPB	chr15:62180324-62180597	Hela-S3	cervix:	n/a	chr15:62180454-62180465
37	CEBPB	chr15:62275362-62275602	HepG2	liver:	n/a	chr15:62275465-62275476
38	CEBPB	chr15:62180373-62180630	K562	blood:	n/a	chr15:62180454-62180465
39	CEBPB	chr15:62227818-62228070	A549	lung:	n/a	chr15:62227893-62227904
40	CEBPB	chr15:62180357-62180498	H1-hESC	embryonic stem cell:	n/a	chr15:62180454-62180465
41	CEBPB	chr15:62265849-62266044	K562	blood:	n/a	chr15:62265887-62265898 chr15:62265886-62265897 chr15:62265888-62265897
42	CEBPB	chr15:62239060-62239292	IMR90	lung:	n/a	n/a
43	CEBPB	chr15:62301294-62301592	K562	blood:	n/a	chr15:62301426-62301437 chr15:62301424-62301437 chr15:62301424-62301435
44	CEBPB	chr15:62302620-62302823	Hela-S3	cervix:	n/a	chr15:62302710-62302721
45	CEBPB	chr15:62182374-62182601	A549	lung:	n/a	n/a
46	CEBPB	chr15:62275367-62275598	MCF-7	breast:	n/a	chr15:62275465-62275476
47	CEBPB	chr15:62199668-62200070	HepG2	liver:	n/a	n/a
48	CEBPB	chr15:62232985-62233209	HepG2	liver:	n/a	n/a
49	CHD1	chr15:62163340-62163388	GM12878	blood:	n/a	n/a
50	CHD1	chr15:62338325-62338537	GM12878	blood:	n/a	n/a

(count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:62145960-62146010	BJ	skin:	n/a
2	chr15:62145960-62146010	BJ	skin:	n/a
3	chr15:62145960-62146010	BE2_C	brain:	n/a
4	chr15:62140361-62140411	PrEC	prostate:	n/a
5	chr15:62145960-62146010	PrEC	prostate:	n/a
6	chr15:62145960-62146010	AG04449	skin:	fetal
7	chr15:62145960-62146010	RPTEC	kidney:	n/a
8	chr15:62145960-62146010	Caco-2	colon:	n/a
9	chr15:62145960-62146010	CMK	blood:	n/a
10	chr15:62145960-62146010	SAEC	small airway:	n/a
11	chr15:62145960-62146010	HEK293	kidney:	embryo
12	chr15:62140361-62140411	HIPEpiC	eye:	n/a
13	chr15:62145960-62146010	HCT-116	colon:	n/a
14	chr15:62140361-62140411	HPAEpiC	pulmonary alveolar:	n/a
15	chr15:62140361-62140411	CMK	blood:	n/a
16	chr15:62145960-62146010	AG10803	skin:	n/a
17	chr15:62140361-62140411	HEEpiC	esophagus:	n/a
18	chr15:62145960-62146010	HNPCEpiC	eye:	n/a
19	chr15:62140361-62140411	A549	lung:	n/a
20	chr15:62140361-62140411	SKMC	muscle:	n/a
21	chr15:62145960-62146010	HPAEpiC	pulmonary alveolar:	n/a
22	chr15:62145960-62146010	NT2-D1	testis:	n/a
23	chr15:62140361-62140411	LNCaP	prostate:	n/a
24	chr15:62145960-62146010	HRPEpiC	eye:	n/a
25	chr15:62140361-62140411	AG04450	lung:	fetal
26	chr15:62145960-62146010	GM12891	blood:	n/a
27	chr15:62140361-62140411	MCF10A-Er-Src	breast:	n/a
28	chr15:62140361-62140411	NHDF-neo	bronchial:	n/a
29	chr15:62145960-62146010	HMEC	breast:	n/a
30	chr15:62140361-62140411	GM12891	blood:	n/a
31	chr15:62140361-62140411	HCPEpiC	choroid plexus:	n/a
32	chr15:62140361-62140411	AG09319	gingival:	n/a
33	chr15:62145960-62146010	HUVEC	blood vessel:	n/a
34	chr15:62145960-62146010	HCM	heart:	n/a
35	chr15:62140361-62140411	AG09309	skin:	n/a
36	chr15:62140361-62140411	Hepatocyte	liver:	n/a
37	chr15:62145960-62146010	GM19239	blood:	n/a
38	chr15:62145960-62146010	HRE	kidney:	n/a
39	chr15:62145960-62146010	MCF-7	breast:	n/a
40	chr15:62140361-62140411	HEK293	kidney:	embryo
41	chr15:62140361-62140411	AG10803	skin:	n/a
42	chr15:62145960-62146010	LNCaP	prostate:	n/a
43	chr15:62140361-62140411	ovcar-3	ovarian:	n/a
44	chr15:62145960-62146010	ProgFib	skin:	n/a
45	chr15:62140361-62140411	BE2_C	brain:	n/a
46	chr15:62140361-62140411	HUVEC	blood vessel:	n/a
47	chr15:62140361-62140411	GM12878	blood:	n/a
48	chr15:62145960-62146010	SKMC	muscle:	n/a
49	chr15:62145960-62146010	HepG2	liver:	n/a
50	chr15:62145960-62146010	HRCEpiC	kidney:	n/a

(count:65 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr15:62205557..62210722-chr15:62211814..62216434,5	K562	blood:
2	chr15:62142649..62144721-chr15:62150330..62151848,2	MCF-7	breast:
3	chr15:62268988..62271189-chr15:62273485..62276457,2	MCF-7	breast:
4	chr15:62151269..62153840-chr15:62155833..62158326,2	K562	blood:
5	chr15:62279274..62280986-chr15:62358759..62361498,2	MCF-7	breast:
6	chr15:62170697..62173317-chr15:62182241..62184749,2	MCF-7	breast:
7	chr15:62311499..62313000-chr16:85836919..85839810,2	K562	blood:
8	chr15:62266682..62269656-chr15:62302600..62304271,2	K562	blood:
9	chr15:62139945..62141808-chr15:62207864..62210759,2	K562	blood:
10	chr15:62248426..62250802-chr15:62259693..62261364,2	K562	blood:
11	chr15:62157514..62159480-chr15:62215874..62217523,2	K562	blood:
12	chr15:62249551..62252071-chr15:62252647..62254754,2	MCF-7	breast:
13	chr15:62328623..62331543-chr15:62331564..62333336,2	MCF-7	breast:
14	chr15:62268988..62271189-chr15:62273485..62276457,2	MCF-7	breast:
15	chr15:62222450..62224583-chr15:62247796..62249719,2	MCF-7	breast:
16	chr15:62204266..62207135-chr15:62210768..62213468,2	MCF-7	breast:
17	chr15:62236123..62237658-chr15:62241444..62244261,2	K562	blood:
18	chr15:62160043..62163025-chr15:62359293..62361455,2	MCF-7	breast:
19	chr15:62320983..62322579-chr15:62345142..62347207,2	K562	blood:
20	chr15:62270934..62272587-chr15:62351243..62353224,2	MCF-7	breast:
21	chr15:62299637..62301994-chr15:62304316..62306759,2	K562	blood:
22	chr15:62195135..62197262-chr15:62198825..62201096,2	MCF-7	breast:
23	chr15:62231542..62233712-chr15:62238622..62240411,2	K562	blood:
24	chr15:62280133..62283452-chr15:62316207..62318715,3	K562	blood:
25	chr15:62235589..62237658-chr15:62241156..62242944,2	K562	blood:
26	chr15:62275008..62277065-chr15:62352447..62354062,2	MCF-7	breast:
27	chr15:62304589..62306825-chr15:62320734..62322432,2	K562	blood:
28	chr15:62334378..62336089-chr15:62337603..62339508,2	K562	blood:
29	chr15:62178968..62180848-chr15:62186299..62188013,2	K562	blood:
30	chr15:62259986..62262200-chr15:62266004..62268197,2	K562	blood:
31	chr15:62334378..62336089-chr15:62337603..62339508,2	K562	blood:
32	chr15:62280133..62283452-chr15:62316207..62318715,3	K562	blood:
33	chr15:62266682..62269656-chr15:62302600..62304271,2	K562	blood:
34	chr15:62195135..62197262-chr15:62198825..62201096,2	MCF-7	breast:
35	chr15:62148662..62150892-chr15:62154836..62157768,2	K562	blood:
36	chr15:62236123..62237658-chr15:62241444..62244261,2	K562	blood:
37	chr15:62222450..62224583-chr15:62247796..62249719,2	MCF-7	breast:
38	chr15:62142649..62144721-chr15:62150330..62151848,2	MCF-7	breast:
39	chr15:62164211..62164737-chr15:62546261..62547255,2	K562	blood:
40	chr15:62148662..62150892-chr15:62154836..62157768,2	K562	blood:
41	chr15:62223179..62225292-chr15:62226281..62228642,2	K562	blood:
42	chr15:62235589..62237658-chr15:62241156..62242944,2	K562	blood:
43	chr15:62223179..62225292-chr15:62226281..62228642,2	K562	blood:
44	chr11:22957855..22958444-chr15:62239142..62239729,2	MCF-7	breast:
45	chr15:62213296..62215607-chr15:62227904..62230544,2	K562	blood:
46	chr15:62241235..62242799-chr15:62250211..62252735,2	K562	blood:
47	chr15:62170697..62173317-chr15:62182241..62184749,2	MCF-7	breast:
48	chr15:62299637..62301994-chr15:62304316..62306759,2	K562	blood:
49	chr15:62283890..62286224-chr15:62350363..62353063,2	K562	blood:
50	chr15:62316405..62318620-chr15:62326377..62328272,2	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C2CD4A-2	chr15:62141596-62141671	ENSG00000259564.1
2	lnc-C2CD4A-10	chr15:62206624-62206875	NONHSAT044263
3	lnc-C2CD4A-12	chr15:62137441-62138449	NONHSAT044260
4	lnc-C2CD4A-2	chr15:62141163-62142028	NONHSAT044261
5	lnc-C2CD4A-2	chr15:62144055-62144351	ENSG00000259564.1

No data

(count:9 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	VPS13C	hsa-miR-26b-5p	chr15:62160105-62160099
2	VPS13C	hsa-miR-26b-5p	chr15:62160099-62160122
3	VPS13C	hsa-miR-186-5p	chr15:62160016-62160037
4	VPS13C	hsa-miR-26b-5p	chr15:62157423-62157416
5	VPS13C	hsa-miR-128-3p	chr15:62145364-62145384
6	VPS13C	hsa-miR-128-3p	chr15:62160069-62160089
7	VPS13C	hsa-miR-186-5p	chr15:62160021-62160015
8	VPS13C	hsa-miR-186-5p	chr15:62145406-62145427
9	VPS13C	hsa-miR-326	chr15:62145517-62145536

Variant related genes	Relation type
VPS13C	TF binding region
RN7SL613P	TF binding region
VPS13C	CpG island
RN7SL613P	CpG island
ENSG00000198535	chromatin interactions
ENSG00000259251	chromatin interactions
ENSG00000264376	chromatin interactions
ENSG00000131143	chromatin interactions
ENSG00000129003	chromatin interactions

Extended variants
information (count: 8607 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:8607 , 50 per page) page: 1 2 3 4 5 6 7 ... 173

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12593278	chr15:62129809-62129810	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs191851553	chr15:62129858-62129859	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs553169079	chr15:62129894-62129895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs556929572	chr15:62129895-62129896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs377610003	chr15:62129901-62129902	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs75856736	chr15:62129908-62129909	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs184826644	chr15:62129936-62129937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs111300959	chr15:62129941-62129942	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs555070464	chr15:62129946-62129947	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs573323055	chr15:62129967-62129968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs141207776	chr15:62129988-62129989	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs540831093	chr15:62129996-62129997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs141660965	chr15:62129999-62130000	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs150533714	chr15:62130056-62130057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs544954051	chr15:62130064-62130065	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs139487231	chr15:62130111-62130112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs529736601	chr15:62130132-62130133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs73428624	chr15:62130179-62130180	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs560200485	chr15:62130187-62130188	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs149660631	chr15:62130209-62130210	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs190104418	chr15:62130240-62130241	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs570356952	chr15:62130241-62130242	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs34896300	chr15:62130297-62130298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs553956737	chr15:62130298-62130299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs560075242	chr15:62130309-62130310	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs79228343	chr15:62130312-62130313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs57148176	chr15:62130313-62130314	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs531488216	chr15:62130314-62130315	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs549695836	chr15:62130353-62130354	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs563043878	chr15:62130402-62130403	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs542123783	chr15:62130410-62130411	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs554724932	chr15:62130412-62130413	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs193177886	chr15:62130417-62130418	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs185043332	chr15:62130450-62130451	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs559179864	chr15:62130513-62130514	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs530607692	chr15:62130516-62130517	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs370823922	chr15:62130523-62130524	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs544892507	chr15:62130538-62130539	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs371952242	chr15:62130540-62130541	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs181781580	chr15:62130546-62130547	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs34040000	chr15:62130588-62130589	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs544355836	chr15:62130622-62130623	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs574308422	chr15:62130637-62130638	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs564130719	chr15:62130647-62130648	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs559937813	chr15:62130648-62130649	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs527368908	chr15:62130652-62130653	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs545616712	chr15:62130655-62130656	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs563919962	chr15:62130686-62130687	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs531426893	chr15:62130695-62130696	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs12901956	chr15:62130726-62130727	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21341218	CNVD
Holoprosencephaly	21359414	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Mental retardation	17124404	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Melanoma	20877625	CNVD
Ovarian cancer	21781307	CNVD

Chromatin state (count:4064 , 50 per page) page: 1 2 3 4 5 6 7 ... 82

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:62128200-62130400	Weak transcription	Fetal Muscle Leg	muscle
2	chr15:62128200-62132600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr15:62130400-62131000	Enhancers	Fetal Muscle Leg	muscle
4	chr15:62131600-62132400	Enhancers	HMEC	breast
5	chr15:62131600-62132600	Bivalent Enhancer	Osteobl	bone
6	chr15:62131600-62132800	Enhancers	Muscle Satellite Cultured Cells	--
7	chr15:62131600-62133000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr15:62131800-62132400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr15:62131800-62132400	Enhancers	HSMM	muscle
10	chr15:62132000-62132800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr15:62132000-62133000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr15:62132200-62132800	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr15:62132400-62159000	Weak transcription	HSMM	muscle
14	chr15:62132400-62171200	Weak transcription	HMEC	breast
15	chr15:62132600-62132800	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr15:62132600-62132800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr15:62132600-62132800	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr15:62132600-62132800	Enhancers	Brain Substantia Nigra	brain
19	chr15:62132600-62133000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr15:62132800-62133000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr15:62132800-62146600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr15:62133800-62134000	Enhancers	Primary T cells fromperipheralblood	blood
23	chr15:62134000-62144200	Weak transcription	Primary T cells fromperipheralblood	blood
24	chr15:62135000-62161600	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr15:62136800-62150000	Weak transcription	HSMMtube	muscle
26	chr15:62137000-62137200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr15:62137000-62137400	Enhancers	Adipose Nuclei	Adipose
28	chr15:62137000-62137600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr15:62137200-62137400	Enhancers	Liver	Liver
30	chr15:62137200-62144800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr15:62137400-62143400	Weak transcription	Adipose Nuclei	Adipose
32	chr15:62137400-62145400	Weak transcription	Liver	Liver
33	chr15:62138400-62143200	Weak transcription	Primary T cells from cord blood	blood
34	chr15:62138800-62142600	Weak transcription	Left Ventricle	heart
35	chr15:62138800-62184200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr15:62139000-62139200	Enhancers	Pancreas	Pancrea
37	chr15:62139200-62143400	Weak transcription	Primary B cells from cord blood	blood
38	chr15:62139200-62144000	Weak transcription	Lung	lung
39	chr15:62139200-62146000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
40	chr15:62139200-62146600	Weak transcription	Pancreas	Pancrea
41	chr15:62139200-62182200	Weak transcription	Brain Substantia Nigra	brain
42	chr15:62139400-62143200	Weak transcription	Fetal Intestine Small	intestine
43	chr15:62139400-62154800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr15:62139600-62142000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr15:62139600-62143600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
46	chr15:62139600-62145400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr15:62139800-62185200	Weak transcription	NHLF	lung
48	chr15:62140000-62143200	Weak transcription	Primary monocytes fromperipheralblood	blood
49	chr15:62140000-62143200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr15:62140000-62143200	Weak transcription	NHDF-Ad	bronchial

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links