Variant report

Variant nsv527542
Chromosome Location chr21:48015869-48027880
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:454 , 50 per page) page: 1 2 3 4 5 6 7 ... 10
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48006000-48018600 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr21:48013600-48018800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr21:48014000-48018600 Weak transcription Primary T cells from cord blood blood
4 chr21:48014400-48018000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr21:48014600-48018600 Weak transcription Brain Anterior Caudate brain
6 chr21:48014800-48017600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr21:48015200-48016200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr21:48015200-48017800 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr21:48015200-48018600 Weak transcription Brain Cingulate Gyrus brain
10 chr21:48015600-48016000 Enhancers Brain Hippocampus Middle brain
11 chr21:48015800-48016600 Enhancers Brain Substantia Nigra brain
12 chr21:48015800-48018600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr21:48016000-48016800 Enhancers Fetal Muscle Leg muscle
14 chr21:48016000-48016800 Enhancers HepG2 liver
15 chr21:48016000-48018600 Weak transcription Brain Hippocampus Middle brain
16 chr21:48016200-48016600 Enhancers Fetal Muscle Trunk muscle
17 chr21:48016200-48017400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
18 chr21:48016400-48016600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr21:48016600-48018000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr21:48016600-48018600 Weak transcription Brain Substantia Nigra brain
21 chr21:48016800-48018600 Weak transcription Fetal Muscle Leg muscle
22 chr21:48016800-48018600 Weak transcription HepG2 liver
23 chr21:48017000-48018400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
24 chr21:48017200-48017600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr21:48017200-48017600 Enhancers Osteobl bone
26 chr21:48017400-48017800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr21:48017400-48019400 Enhancers Primary T cells fromperipheralblood blood
28 chr21:48017600-48017800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr21:48017600-48017800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr21:48017600-48018600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr21:48017600-48018600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr21:48017600-48018800 Weak transcription Osteobl bone
33 chr21:48017600-48020200 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr21:48017800-48018000 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
35 chr21:48017800-48018000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr21:48017800-48018000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
37 chr21:48017800-48018000 Enhancers Primary mononuclear cells fromperipheralblood Blood
38 chr21:48017800-48018000 Enhancers Gastric stomach
39 chr21:48017800-48018000 Enhancers Spleen Spleen
40 chr21:48017800-48018200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
41 chr21:48017800-48018600 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr21:48017800-48018800 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr21:48017800-48019200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr21:48017800-48019400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr21:48017800-48020800 Enhancers Primary T helper cells PMA-I stimulated --
46 chr21:48018000-48018200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
47 chr21:48018000-48018200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
48 chr21:48018000-48018400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr21:48018000-48018600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr21:48018000-48019000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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